Non-Coding RNA Search

Ss1.1-Pig4-TMW8047L19.3

Sequence:


               
               GGTTATCTGCTCTACAGGCTACTGGCCCCATTACAATCATGTGATACAAAAACGAAAACT
GGTTATTAGTTCTGAACCTGTGCCTCCCCAAACAAAACTCAAGCCACTCTTCTGCCCTCT
TCCCCTCTGCATTAACCCTTTGCTGATCCTCAGGGACCATTCCCCCAACACCCCCATACC
TGGGTGAGGGATGTTGGACAGAGCCCATTTCCATGTGCTGCATCTGGGAGTGCACTAACA
TGTTTGCTCTTGGTTGATGGACAATTTAGAGGCCACGGAGTGAAAATAGTCTACAGTGAC
AAGGGAGAATAGCTAGGTATGCTGCATTCATAGTCCCGTTCCCTCTGTGAGAAGTTTAGG
TAGCAGCCTCTACTCTACTTTAGGGTTGTCATCTTGGACGCATTCTATCTTGTAATAGGC
CAAATGTAGTTCAGTTAATCTTCTATGTGTATGCCCCGCACCGCACCGCCCTTGGGGGAG
GGGCCTCACCTCGTGGCCGCCCCGGTCCCGCCCCCGGGGGAGGGGTCTCACCTCGTGGCT
GCTTCGGCCCCGCCCCCGGAGGGAGGCCCGCCTCCTGCCCGCCTTGGCCCGCAGGGTGTA
CCCAGTCTGTACACGTCATTGTGAAAGCTTTAGACGGTGACAGTTTGCACATATAAAATA
AAGTGACCGCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTTATCTGCTCTACAGGCTACTGGCCCCATTACAATCATGTGATACAAAAACGAAAACT
GGTTATTAGTTCTGAACCTGTGCCTCCCCAAACAAAACTCAAGCCACTCTTCTGCCCTCT
TCCCCTCTGCATTAACCCTTTGCTGATCCTCAGGGACCATTCCCCCAACACCCCCATACC
TGGGTGAGGGATGTTGGACAGAGCCCATTTCCATGTGCTGCATCTGGGAGTGCACTAACA
TGTTTGCTCTTGGTTGATGGACAATTTAGAGGCCACGGAGTGAAAATAGTCTACAGTGAC
AAGGGAGAATAGCTAGGTATGCTGCATTCATAGTCCCGTTCCCTCTGTGAGAAGTTTAGG
TAGCAGCCTCTACTCTACTTTAGGGTTGTCATCTTGGACGCATTCTATCTTGTAATAGGC
CAAATGTAGTTCAGTTAATCTTCTATGTGTATGCCCCGCACCGCACCGCCCTTGGGGGAG
GGGCCTCACCTCGTGGCCGCCCCGGTCCCGCCCCCGGGGGAGGGGTCTCACCTCGTGGCT
GCTTCGGCCCCGCCCCCGGAGGGAGGCCCGCCTCCTGCCCGCCTTGGCCCGCAGGGTGTA
CCCAGTCTGTACACGTCATTGTGAAAGCTTTAGACGGTGACAGTTTGCACATATAAAATA
AAGTGACCGCCT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               104-253, - strand, RNAz p=0.985608

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               104-253, - strand, RNAz p=0.985608

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               11-449, gnl|bosTau2|chr19 (38803196-38803635)
               

               
               11-449, gnl|Hg17|chr17 (37985710-37985277)
               

               
               11-449, gnl|Mm7|chr11 (101206245-101205795)
               


               
               452-672, gnl|bosTau2|chr6 (59906648-59906870)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-449, gnl|bosTau2|chr19 (38803196-38803635)
               

               
               11-449, gnl|Hg17|chr17 (37985710-37985277)
               

               
               11-449, gnl|Mm7|chr11 (101206245-101205795)
               


               
               452-672, gnl|bosTau2|chr6 (59906648-59906870)

	11-449, gnl\|bosTau2\|chr19 (38803196-38803635)
	11-449, gnl\|Hg17\|chr17 (37985710-37985277)
	11-449, gnl\|Mm7\|chr11 (101206245-101205795)

	452-672, gnl\|bosTau2\|chr6 (59906648-59906870)