Non-Coding RNA Search

Ss1.1-Pig4-TMW8047N17.5

Sequence:


               
               ATACATTCTTTTTTTCACATTATCCTCTACACAAGCCTTTCGGATGGTGCCAGGGAGAAG
TAACCCTTCTCCTGGGCCTTCCATGTCTTTCCTCTCTCATTCCTGTGAGCTCCATGGGGC
AGCCTGGTGTTGGCTCTTTTTTTTTTTTTTTTTGAGTTCCTGGGACTTAGCCAGGAAGGT
CAAGTCCAGCACAAACTTGTGAAGAACTAGAGAGCATGGTGCTAAAATAGGGGTGAGTTT
AGAGATAAGAGTGAGTAAACATTTATCTGCGACAAGATGGCAAAAGCTAGTAAATACTTG
TCGAATTGATAACAGGTATTAATAATTAACAGTTTGTTCAAAAAAAGAAAAGAGAGGGAA
CCAGTAAGTTAGGAGACATAACAATCAAATATAACAAGTACGTCTCTTTGGATCCTTGTT
TGAACACCTCAGTTGTTAAGAAGAATATGTAAGGAGTTCCTGCTGTGGCACGGCAGGTTG
AGGATCTGGCATTGTCTCTGCAGTGGTGCAGGTTCAATCCTGGGCCTGGTGCAGTGTGTT
CAGGACCTGGCATTGCTGCAACTGTGGCATAGATCACAGCTGCAGTATGGATTTAATCCC
TGCCCTGGGAACTTCCATGTGCTGCAAGTGTGGCCAAAAAACCCCCGTAAGATATTTATC
TATTTATATTTGGGGAAATGTGAACGCACACTGGGTATTTAAGGATGTGAAGAGGTATTG
TTACCGTTTATAGAAATGATATTGCAATTCGAGGTTTATAAAATCATTTTTTTAGGCATA
CATGTAAAACAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATACATTCTTTTTTTCACATTATCCTCTACACAAGCCTTTCGGATGGTGCCAGGGAGAAG
TAACCCTTCTCCTGGGCCTTCCATGTCTTTCCTCTCTCATTCCTGTGAGCTCCATGGGGC
AGCCTGGTGTTGGCTCTTTTTTTTTTTTTTTTTGAGTTCCTGGGACTTAGCCAGGAAGGT
CAAGTCCAGCACAAACTTGTGAAGAACTAGAGAGCATGGTGCTAAAATAGGGGTGAGTTT
AGAGATAAGAGTGAGTAAACATTTATCTGCGACAAGATGGCAAAAGCTAGTAAATACTTG
TCGAATTGATAACAGGTATTAATAATTAACAGTTTGTTCAAAAAAAGAAAAGAGAGGGAA
CCAGTAAGTTAGGAGACATAACAATCAAATATAACAAGTACGTCTCTTTGGATCCTTGTT
TGAACACCTCAGTTGTTAAGAAGAATATGTAAGGAGTTCCTGCTGTGGCACGGCAGGTTG
AGGATCTGGCATTGTCTCTGCAGTGGTGCAGGTTCAATCCTGGGCCTGGTGCAGTGTGTT
CAGGACCTGGCATTGCTGCAACTGTGGCATAGATCACAGCTGCAGTATGGATTTAATCCC
TGCCCTGGGAACTTCCATGTGCTGCAAGTGTGGCCAAAAAACCCCCGTAAGATATTTATC
TATTTATATTTGGGGAAATGTGAACGCACACTGGGTATTTAAGGATGTGAAGAGGTATTG
TTACCGTTTATAGAAATGATATTGCAATTCGAGGTTTATAAAATCATTTTTTTAGGCATA
CATGTAAAACAT

Aligned organism(s): 8 entry(ies)

More info

Aligned organism(s): 8 entry(ies)

Help | Less info


               
               26-329, gnl|bosTau2|chr29 (30501500-30501208)
               

               
               26-329, gnl|Hg17|chr11 (65410913-65410625)
               

               
               26-329, gnl|Mm7|chr19 (5356707-5357053)
               


               
               341-448, gnl|bosTau2|chr23 (20987585-20987692)
               

               
               341-448, gnl|hg17|chr6 (30585039-30585239)
               

               
               341-448, gnl|loxAfr1|scaffold_33745 (11871-11636)
               

               
               341-448, gnl|panTro1|chr5 (31036413-31036616)
               

               
               341-448, gnl|rheMac2|chr4 (29997578-29997773)

Aligned organism(s): 8 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               26-329, gnl|bosTau2|chr29 (30501500-30501208)
               

               
               26-329, gnl|Hg17|chr11 (65410913-65410625)
               

               
               26-329, gnl|Mm7|chr19 (5356707-5357053)
               


               
               341-448, gnl|bosTau2|chr23 (20987585-20987692)
               

               
               341-448, gnl|hg17|chr6 (30585039-30585239)
               

               
               341-448, gnl|loxAfr1|scaffold_33745 (11871-11636)
               

               
               341-448, gnl|panTro1|chr5 (31036413-31036616)
               

               
               341-448, gnl|rheMac2|chr4 (29997578-29997773)

	26-329, gnl\|bosTau2\|chr29 (30501500-30501208)
	26-329, gnl\|Hg17\|chr11 (65410913-65410625)
	26-329, gnl\|Mm7\|chr19 (5356707-5357053)

	341-448, gnl\|bosTau2\|chr23 (20987585-20987692)
	341-448, gnl\|hg17\|chr6 (30585039-30585239)
	341-448, gnl\|loxAfr1\|scaffold_33745 (11871-11636)
	341-448, gnl\|panTro1\|chr5 (31036413-31036616)
	341-448, gnl\|rheMac2\|chr4 (29997578-29997773)