Non-Coding RNA Search

Ss1.1-Pig4-TMW8048G17.3

Sequence:


               
               GGATCCTGTAGAGTCTTTAGATGTTTTTCAAGTGGAAATGAAACATCGCACAGCAGATTA
AATGCTATTGTGGTTGCAACCAGATACTTCGAGTGCTCAAAGATATACACCAAGGAACTC
ATCTAAGTGAAAATAGATGGGATTTAGAGACAGATTCGAGATTTGCTACGAGAAATTAGA
TTTACTGCAAAGTAAAGCAATTAACCTATGACTTTGCCTGTAGGAAATGAAGCACCGATA
------------------------------------------------------------
------------------------CAAAAACCAAACCAAACCAAACCAAACCAAACCAGA
CCAAACCAAACCAAACCAACGCCCCCCTCAACTTTGCAGATGTAATATTAAGGATTTTGA
GACGGAAAATTTATCTTGAGTTATCTAAGTGGGCCCAAACTAATCACATAGGTTTTTTTA
AAAAATGAATTCATTAGGTCAATTTCTGTTTTTATCTATTTTTTTTGAAGTAAAGTTTGC
CTACAATATTAGTTTCAGGTGTACAATATAGTTGCTCAGAATTTTTATGGATTATACTCC
ATTTAAATTTATTATAAAACATTGGCTGTATTCCCTGTGTTGTACAATATATCCTTGTAT
CTTATTTATTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGATCCTGTAGAGTCTTTAGATGTTTTTCAAGTGGAAATGAAACATCGCACAGCAGATTA
AATGCTATTGTGGTTGCAACCAGATACTTCGAGTGCTCAAAGATATACACCAAGGAACTC
ATCTAAGTGAAAATAGATGGGATTTAGAGACAGATTCGAGATTTGCTACGAGAAATTAGA
TTTACTGCAAAGTAAAGCAATTAACCTATGACTTTGCCTGTAGGAAATGAAGCACCGATA
------------------------------------------------------------
------------------------CAAAAACCAAACCAAACCAAACCAAACCAAACCAGA
CCAAACCAAACCAAACCAACGCCCCCCTCAACTTTGCAGATGTAATATTAAGGATTTTGA
GACGGAAAATTTATCTTGAGTTATCTAAGTGGGCCCAAACTAATCACATAGGTTTTTTTA
AAAAATGAATTCATTAGGTCAATTTCTGTTTTTATCTATTTTTTTTGAAGTAAAGTTTGC
CTACAATATTAGTTTCAGGTGTACAATATAGTTGCTCAGAATTTTTATGGATTATACTCC
ATTTAAATTTATTATAAAACATTGGCTGTATTCCCTGTGTTGTACAATATATCCTTGTAT
CTTATTTATTTT

Aligned organism(s): 8 entry(ies)

More info

Aligned organism(s): 8 entry(ies)

Help | Less info


               
               2-190, gnl|bosTau2|chr1 (6938215-6938403)
               

               
               2-190, gnl|canFam2|chr31 (26755901-26756053)
               

               
               2-190, gnl|hg17|chr21 (29000371-29000518)
               

               
               2-190, gnl|Hg17|chr21 (29000547-29000370)
               

               
               2-190, gnl|oryCun1|scaffold_176466 (36570-36440)
               

               
               2-190, gnl|panTro1|chr22 (29016108-29016255)
               

               
               2-190, gnl|rheMac2|chr3 (17973004-17972859)
               


               
               423-588, gnl|bosTau2|chr11 (52832551-52832715)

Aligned organism(s): 8 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-190, gnl|bosTau2|chr1 (6938215-6938403)
               

               
               2-190, gnl|canFam2|chr31 (26755901-26756053)
               

               
               2-190, gnl|hg17|chr21 (29000371-29000518)
               

               
               2-190, gnl|Hg17|chr21 (29000547-29000370)
               

               
               2-190, gnl|oryCun1|scaffold_176466 (36570-36440)
               

               
               2-190, gnl|panTro1|chr22 (29016108-29016255)
               

               
               2-190, gnl|rheMac2|chr3 (17973004-17972859)
               


               
               423-588, gnl|bosTau2|chr11 (52832551-52832715)

	2-190, gnl\|bosTau2\|chr1 (6938215-6938403)
	2-190, gnl\|canFam2\|chr31 (26755901-26756053)
	2-190, gnl\|hg17\|chr21 (29000371-29000518)
	2-190, gnl\|Hg17\|chr21 (29000547-29000370)
	2-190, gnl\|oryCun1\|scaffold_176466 (36570-36440)
	2-190, gnl\|panTro1\|chr22 (29016108-29016255)
	2-190, gnl\|rheMac2\|chr3 (17973004-17972859)

	423-588, gnl\|bosTau2\|chr11 (52832551-52832715)