Non-Coding RNA Search

Ss1.1-Pig4-TMW8049B18.5

Sequence:


               
               CGCAGATGCAGAGAAGCGGGGCAGAGGTTTTAGGCACTAGATGTACAGCTGTGACGGAGA
CCTGCTCCCACCCCCAGTGAATTTTCCATCTAGTCTGAGAAACAACTGTGTGAATAACTA
GTTCAAATACAAGGGGCAATGAAGTGAATACAAAAGACCTGTGGGAGCAGGAGCAGAGGG
CTCCTGAGGAGGAAGGCTCGTCCCCCAGAAGTTTCACTGAGTTGATTGTAGAGCCCAAGA
TGGATCAGGACTGCGCCGAAACCACACTTCTCTCCCCTTACCTCTTGGACGCATGTATCC
TCAGCCAAGCGTAACCAAAGAAAGCTCCTTGGACCCCACCCTCTTCTGTCCCACTCTGGT
GACCGTGTGTGGTGACAGGGTAATGCCTCAGCTTAACGTGAGTGGTGTTCATAGACCAGC
ACAACACCCCTGAACTGGACAAAGGTCACTGAGATCCAGAGCTTCCTCCTGTCCTGCACA
GTCTTGAGACTCTGAGATGCTGGTGTAGGTTTTCCTCTGAACCAAATAACTTCCCCTGTT
TAGACTGCAGCTTCCTAAACGTGCCTGGCTTCGCTATTATTAATCCCAACTTGCCTGCCT
CTCCTTGGCCCCACTTGAAGAACTGTTTCCCAGTGACCAGATGACCCTCGTTGAGCTGGC
CAGGCTTATTCTGTCTCCCGAAGTTCCCGTCACTCTTCTTCTGCTGACTCGCCTGTCCTA
AAAGCCTTAGGCTCCGCGGACCCGACCCTGCTATCAACCAAAAGTGCCCGTGACTTTTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGCAGATGCAGAGAAGCGGGGCAGAGGTTTTAGGCACTAGATGTACAGCTGTGACGGAGA
CCTGCTCCCACCCCCAGTGAATTTTCCATCTAGTCTGAGAAACAACTGTGTGAATAACTA
GTTCAAATACAAGGGGCAATGAAGTGAATACAAAAGACCTGTGGGAGCAGGAGCAGAGGG
CTCCTGAGGAGGAAGGCTCGTCCCCCAGAAGTTTCACTGAGTTGATTGTAGAGCCCAAGA
TGGATCAGGACTGCGCCGAAACCACACTTCTCTCCCCTTACCTCTTGGACGCATGTATCC
TCAGCCAAGCGTAACCAAAGAAAGCTCCTTGGACCCCACCCTCTTCTGTCCCACTCTGGT
GACCGTGTGTGGTGACAGGGTAATGCCTCAGCTTAACGTGAGTGGTGTTCATAGACCAGC
ACAACACCCCTGAACTGGACAAAGGTCACTGAGATCCAGAGCTTCCTCCTGTCCTGCACA
GTCTTGAGACTCTGAGATGCTGGTGTAGGTTTTCCTCTGAACCAAATAACTTCCCCTGTT
TAGACTGCAGCTTCCTAAACGTGCCTGGCTTCGCTATTATTAATCCCAACTTGCCTGCCT
CTCCTTGGCCCCACTTGAAGAACTGTTTCCCAGTGACCAGATGACCCTCGTTGAGCTGGC
CAGGCTTATTCTGTCTCCCGAAGTTCCCGTCACTCTTCTTCTGCTGACTCGCCTGTCCTA
AAAGCCTTAGGCTCCGCGGACCCGACCCTGCTATCAACCAAAAGTGCCCGTGACTTTTTG

Aligned organism(s): 5 entry(ies)

More info

Aligned organism(s): 5 entry(ies)

Help | Less info


               
               25-196, gnl|bosTau2|chr4 (64425707-64425880)
               

               
               25-196, gnl|Hg17|chr7 (150308342-150308173)
               


               
               230-778, gnl|bosTau2|chr4 (64428610-64429135)
               

               
               230-778, gnl|Hg17|chr7 (150304431-150303870)
               

               
               230-778, gnl|Mm7|chr5 (23569037-23568389)

Aligned organism(s): 5 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               25-196, gnl|bosTau2|chr4 (64425707-64425880)
               

               
               25-196, gnl|Hg17|chr7 (150308342-150308173)
               


               
               230-778, gnl|bosTau2|chr4 (64428610-64429135)
               

               
               230-778, gnl|Hg17|chr7 (150304431-150303870)
               

               
               230-778, gnl|Mm7|chr5 (23569037-23568389)

	25-196, gnl\|bosTau2\|chr4 (64425707-64425880)
	25-196, gnl\|Hg17\|chr7 (150308342-150308173)

	230-778, gnl\|bosTau2\|chr4 (64428610-64429135)
	230-778, gnl\|Hg17\|chr7 (150304431-150303870)
	230-778, gnl\|Mm7\|chr5 (23569037-23568389)