Ss1.1-Pig4-TMW8049L06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTTGAAAGAAGTAGAGAAAACAGTGTAGACAGAATTTTTTATTTTTCAGACTCTTAGTAA GTGCTTGCAGGCATCCTCGACCTGGTCGCGACGCTGACGTCCTGCCTGTCTGTGGTCTTC CTGCAGGAGTCGGCGTGTTGATCCCCAACCAGCCAAGATGAACATGGTGAAGAGAATCAT GGGGCGGCCGAGGCAGGAGGAGTGCAGCCCGCAAGACAACGCCCTGGGCCTGATGCACCT GCGCCGTCTCTTCACCGAGTTGTGCCACCCTCCCCGGCACATGACTCAGAAGGAGCAGGA GGAGAAGCTGTACATGATGCTGCCAGTGTTTAATAGGGTCTTTGGAAATGCTCCGCCAAA TACAATGACAGAAAAATTTTCTGATCTTCTGCAGTTCACAACACAAGTCTCACGACTGAT GGTGACAGAAATCCGAAGGCGAGCATCCAACAAATCCACAGAGGCTGCAAGTCGGGCCAT CGTCCAGTTCTTGGAAATCCATCAGAGTGAAGAAGCCAGTAGAGGGTGGATGCTTCTGAC AACAATTAACTTGTTAGCATCTTCTGGTCAGAAAACCGTGGACTGCATGACAACGATGTC AGTGCCTTCCACCCTGGTTAAATGCTTATATCTGTTTTTTGACCTCCCGCATGTGCCTGA GGCAGTTGGGGGTGCCCAGAATGAGCTACCTCTAGCAGAACGCCGTGGACTACTCCAGAA AGTTTTTGTGCAGATCTTAGTGAAACTGTGCAGTTTTGTCTCTCCAGCTGAGGAGCTGGC CCAGAAGGACGATCTCCAGCTTTTATTCAGTGCAATAACCTCTTGGTGCCCTCCCTACAA CCTGCTCTGGAGGAAGAGTGCTGGCGAGGTCCTCATGACCATCTCTCGCCACGGCCTCAG CGTCAATGTGGTGAAGTATATTCACGGCGAGTCTCTCTTAGCCTGTTCATTTCCCTGCTC GGAGCTGCTCCCCCCTTTCCCTTCCTCGTGTGATGGCGGATTTGTCTTCCTCTCTCCCTT CTCCAAAGATTCTCTTTTAAATTAAAACACGTATTTGCCAGGAGAAAAGATTTTCTGTTG TATTGGTGAGGCATTTCAAAGGTAAGACATTCTCAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTTGAAAGAAGTAGAGAAAACAGTGTAGACAGAATTTTTTATTTTTCAGACTCTTAGTAA GTGCTTGCAGGCATCCTCGACCTGGTCGCGACGCTGACGTCCTGCCTGTCTGTGGTCTTC CTGCAGGAGTCGGCGTGTTGATCCCCAACCAGCCAAGATGAACATGGTGAAGAGAATCAT GGGGCGGCCGAGGCAGGAGGAGTGCAGCCCGCAAGACAACGCCCTGGGCCTGATGCACCT GCGCCGTCTCTTCACCGAGTTGTGCCACCCTCCCCGGCACATGACTCAGAAGGAGCAGGA GGAGAAGCTGTACATGATGCTGCCAGTGTTTAATAGGGTCTTTGGAAATGCTCCGCCAAA TACAATGACAGAAAAATTTTCTGATCTTCTGCAGTTCACAACACAAGTCTCACGACTGAT GGTGACAGAAATCCGAAGGCGAGCATCCAACAAATCCACAGAGGCTGCAAGTCGGGCCAT CGTCCAGTTCTTGGAAATCCATCAGAGTGAAGAAGCCAGTAGAGGGTGGATGCTTCTGAC AACAATTAACTTGTTAGCATCTTCTGGTCAGAAAACCGTGGACTGCATGACAACGATGTC AGTGCCTTCCACCCTGGTTAAATGCTTATATCTGTTTTTTGACCTCCCGCATGTGCCTGA GGCAGTTGGGGGTGCCCAGAATGAGCTACCTCTAGCAGAACGCCGTGGACTACTCCAGAA AGTTTTTGTGCAGATCTTAGTGAAACTGTGCAGTTTTGTCTCTCCAGCTGAGGAGCTGGC CCAGAAGGACGATCTCCAGCTTTTATTCAGTGCAATAACCTCTTGGTGCCCTCCCTACAA CCTGCTCTGGAGGAAGAGTGCTGGCGAGGTCCTCATGACCATCTCTCGCCACGGCCTCAG CGTCAATGTGGTGAAGTATATTCACGGCGAGTCTCTCTTAGCCTGTTCATTTCCCTGCTC GGAGCTGCTCCCCCCTTTCCCTTCCTCGTGTGATGGCGGATTTGTCTTCCTCTCTCCCTT CTCCAAAGATTCTCTTTTAAATTAAAACACGTATTTGCCAGGAGAAAAGATTTTCTGTTG TATTGGTGAGGCATTTCAAAGGTAAGACATTCTCAT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 771-890, - strand, RNAz p=0.951336 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 771-890, - strand, RNAz p=0.951336 |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 1-339, gnl|bosTau2|chr6 (57800138-57800483) | |
| 1-339, gnl|Hg17|chr4 (86139088-86138742) | |
| 1-339, gnl|Mm7|chr5 (101170072-101169737) | |
| 460-571, gnl|bosTau2|chr6 (57831955-57832066) | |
| 460-571, gnl|canFam2|chr32 (11547125-11547266) | |
| 460-571, gnl|danRer3|chr5 (51178449-51178581) | |
| 460-571, gnl|dasNov1|scaffold_1533 (181742-181888) | |
| 460-571, gnl|echTel1|scaffold_205593 (3001-3146) | |
| 460-571, gnl|fr1|chrUn (245415082-245414959) | |
| 460-571, gnl|galGal2|chr4 (47471525-47471376) | |
| 460-571, gnl|hg17|chr4 (86119459-86119604) | |
| 460-571, gnl|Hg17|chr4 (86119597-86119486) | |
| 460-571, gnl|loxAfr1|scaffold_2296 (94452-94597) | |
| 460-571, gnl|mm7|chr5 (101149449-101149594) | |
| 460-571, gnl|Mm7|chr5 (101149587-101149476) | |
| 460-571, gnl|monDom2|scaffold_37 (18934471-18934616) | |
| 460-571, gnl|oryCun1|scaffold_208217 (120452-120597) | |
| 460-571, gnl|panTro1|chr3 (47561017-47560872) | |
| 460-571, gnl|rheMac2|chr5 (44684219-44684073) | |
| 460-571, gnl|rn3|chr14 (8933404-8933262) | |
| 460-571, gnl|tetNig1|chr12 (3583032-3583155) | |
| 460-571, gnl|xenTro1|scaffold_304 (894089-894222) | |
| 732-1073, gnl|bosTau2|chr6 (57840437-57840778) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-339, gnl|bosTau2|chr6 (57800138-57800483) | |
| 1-339, gnl|Hg17|chr4 (86139088-86138742) | |
| 1-339, gnl|Mm7|chr5 (101170072-101169737) | |
| 460-571, gnl|bosTau2|chr6 (57831955-57832066) | |
| 460-571, gnl|canFam2|chr32 (11547125-11547266) | |
| 460-571, gnl|danRer3|chr5 (51178449-51178581) | |
| 460-571, gnl|dasNov1|scaffold_1533 (181742-181888) | |
| 460-571, gnl|echTel1|scaffold_205593 (3001-3146) | |
| 460-571, gnl|fr1|chrUn (245415082-245414959) | |
| 460-571, gnl|galGal2|chr4 (47471525-47471376) | |
| 460-571, gnl|hg17|chr4 (86119459-86119604) | |
| 460-571, gnl|Hg17|chr4 (86119597-86119486) | |
| 460-571, gnl|loxAfr1|scaffold_2296 (94452-94597) | |
| 460-571, gnl|mm7|chr5 (101149449-101149594) | |
| 460-571, gnl|Mm7|chr5 (101149587-101149476) | |
| 460-571, gnl|monDom2|scaffold_37 (18934471-18934616) | |
| 460-571, gnl|oryCun1|scaffold_208217 (120452-120597) | |
| 460-571, gnl|panTro1|chr3 (47561017-47560872) | |
| 460-571, gnl|rheMac2|chr5 (44684219-44684073) | |
| 460-571, gnl|rn3|chr14 (8933404-8933262) | |
| 460-571, gnl|tetNig1|chr12 (3583032-3583155) | |
| 460-571, gnl|xenTro1|scaffold_304 (894089-894222) | |
| 732-1073, gnl|bosTau2|chr6 (57840437-57840778) |