Non-Coding RNA Search

Ss1.1-Pig4-TMW8050B02.3

Sequence:


               
               AAAAAACTGAAGAAGCTGTGAATAAGGTGAAAATTCAGGCCATGTCAGAAGTACAGAAAG
CCGTTGCTGAGGCAGAGCAAAAAGCCTTTGAAGTGATTGCAACCGAGAGAGCTCGGATGG
AGCAGACTATAGCGGATGTCAAACGGCAAGCTGCAGAGGATGCCTTTCTCGTCATAAATG
AGCAAGAAGAGTCAACGGAGGTCAGAGCTCTGTTAGCCTGGGGCCTGGGGCCAGAGCAGT
GGGGTGACCAAGCCCATTACTGTCTTCTCAAGTGCTGGGCAGTAAGACCCAAGAGGCCAC
TCTCAACCTAGAGGATTATAGTTTCTACTCAGTACCAGAGAGATTTGGTTTTCAGTTATT
ACATTATATTCTTATATGAATTGGTTTAAGTTTTTGAAAACTCACCTTAAAGGCAGAGTT
TGTGGAACTGCGTGACAGAGATGACCGCCACTCCCTAGGTGGGCTTACTGTGGGCCAGGT
ATAGAGCTAAGTGTGTATGTGGGTCTTTGTGATCCTCACAGTGATCCTGTGACGTGTAGT
ACTGTTGGATTCCAATTTTATAAATGAGGAAACTGTGGCTCAGGAAATTTAACCACTATA
ATCCTATTTGGCTAAAGCCAGAGCACAGGAGAAAGGAAATGCAGGATCCTGTAGCATCCA
GTCTGTTTACAAACAGAATGGGTCTTTCCTGGATTGAAGTTGACAGATCCAGCAGACCTG
CCTAACTGCCCAGGGCCCAGGACTTGGTGACGCTTCTACACAGGACATTCGTTTACCATG
ATAAGGACAAAATTGAATGAACTGTAAAGAAAATGCATGTGATAAAACCATAGCAGTCCT
TTCAAACATAATGAAATTCTTCTCTAAGTTTCATTTTAGTCACTTTCCAGCTTTAAGACA
AACTTTTAGGTCCTGAAACAAGCCTGTTTCAGTAAGTAGGTAAATCTCATCTACTATTTG
GGATATTCTCTTGATGTTATAAAGAACTGAGTGTTTTTTTGTCAGCTTTTAAACAACAGA
AATTTTATTATCTCATCCCCTTTAAATGATCTCTCTCAGTATGGCAGTGTTAAGCATGGT
GATGTGAAAATGAAAATGCCTAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAAACTGAAGAAGCTGTGAATAAGGTGAAAATTCAGGCCATGTCAGAAGTACAGAAAG
CCGTTGCTGAGGCAGAGCAAAAAGCCTTTGAAGTGATTGCAACCGAGAGAGCTCGGATGG
AGCAGACTATAGCGGATGTCAAACGGCAAGCTGCAGAGGATGCCTTTCTCGTCATAAATG
AGCAAGAAGAGTCAACGGAGGTCAGAGCTCTGTTAGCCTGGGGCCTGGGGCCAGAGCAGT
GGGGTGACCAAGCCCATTACTGTCTTCTCAAGTGCTGGGCAGTAAGACCCAAGAGGCCAC
TCTCAACCTAGAGGATTATAGTTTCTACTCAGTACCAGAGAGATTTGGTTTTCAGTTATT
ACATTATATTCTTATATGAATTGGTTTAAGTTTTTGAAAACTCACCTTAAAGGCAGAGTT
TGTGGAACTGCGTGACAGAGATGACCGCCACTCCCTAGGTGGGCTTACTGTGGGCCAGGT
ATAGAGCTAAGTGTGTATGTGGGTCTTTGTGATCCTCACAGTGATCCTGTGACGTGTAGT
ACTGTTGGATTCCAATTTTATAAATGAGGAAACTGTGGCTCAGGAAATTTAACCACTATA
ATCCTATTTGGCTAAAGCCAGAGCACAGGAGAAAGGAAATGCAGGATCCTGTAGCATCCA
GTCTGTTTACAAACAGAATGGGTCTTTCCTGGATTGAAGTTGACAGATCCAGCAGACCTG
CCTAACTGCCCAGGGCCCAGGACTTGGTGACGCTTCTACACAGGACATTCGTTTACCATG
ATAAGGACAAAATTGAATGAACTGTAAAGAAAATGCATGTGATAAAACCATAGCAGTCCT
TTCAAACATAATGAAATTCTTCTCTAAGTTTCATTTTAGTCACTTTCCAGCTTTAAGACA
AACTTTTAGGTCCTGAAACAAGCCTGTTTCAGTAAGTAGGTAAATCTCATCTACTATTTG
GGATATTCTCTTGATGTTATAAAGAACTGAGTGTTTTTTTGTCAGCTTTTAAACAACAGA
AATTTTATTATCTCATCCCCTTTAAATGATCTCTCTCAGTATGGCAGTGTTAAGCATGGT
GATGTGAAAATGAAAATGCCTAAA

Aligned organism(s): 7 entry(ies)

More info

Aligned organism(s): 7 entry(ies)

Help | Less info


               
               9-735, gnl|bosTau2|chr13 (48330070-48329394)
               

               
               9-735, gnl|Hg17|chr20 (31691807-31692834)
               


               
               12-200, gnl|bosTau2|chr10 (49160316-49160503)
               

               
               12-200, gnl|Hg17|chr20 (31691810-31691998)
               

               
               12-200, gnl|Mm7|chr2 (154272082-154275741)
               


               
               805-1102, gnl|bosTau2|chr13 (48329357-48329054)
               

               
               805-1102, gnl|Hg17|chr20 (31692887-31693446)

Aligned organism(s): 7 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               9-735, gnl|bosTau2|chr13 (48330070-48329394)
               

               
               9-735, gnl|Hg17|chr20 (31691807-31692834)
               


               
               12-200, gnl|bosTau2|chr10 (49160316-49160503)
               

               
               12-200, gnl|Hg17|chr20 (31691810-31691998)
               

               
               12-200, gnl|Mm7|chr2 (154272082-154275741)
               


               
               805-1102, gnl|bosTau2|chr13 (48329357-48329054)
               

               
               805-1102, gnl|Hg17|chr20 (31692887-31693446)

	9-735, gnl\|bosTau2\|chr13 (48330070-48329394)
	9-735, gnl\|Hg17\|chr20 (31691807-31692834)

	12-200, gnl\|bosTau2\|chr10 (49160316-49160503)
	12-200, gnl\|Hg17\|chr20 (31691810-31691998)
	12-200, gnl\|Mm7\|chr2 (154272082-154275741)

	805-1102, gnl\|bosTau2\|chr13 (48329357-48329054)
	805-1102, gnl\|Hg17\|chr20 (31692887-31693446)