Non-Coding RNA Search

Ss1.1-Pig4-TMW8050K11.5

Sequence:


               
               CAGATGGCCAAAAGCACATGAAAAGGCGCTCCGTATCACTAATTATTAGAGAAATGAAAA
TCAAAATTGCAAGGAAGTATCACCTCACACAAATCAGAGTGGCCATCATCCAAAAGTCTA
CAAACAATAAATGCTGAAGAGGGCGGGAGAAAAGGAAAGCAATCTACACAGTTAGTGGGA
TTTTATTTTAAATTAGGGCAAACTTCGTACACTTTTAGTTAAGGAGAATGTGTGCCCCAA
ATTGCACATTCAGATTGCCAAAACCTTCTATGATGGTAAGGACTGCTGTATGAAATGTAT
ACTGCAAATTCCCCCAAATCCACTCAAACTTTTTCTCCCTACAAATTAACATGTTGTAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGATGGCCAAAAGCACATGAAAAGGCGCTCCGTATCACTAATTATTAGAGAAATGAAAA
TCAAAATTGCAAGGAAGTATCACCTCACACAAATCAGAGTGGCCATCATCCAAAAGTCTA
CAAACAATAAATGCTGAAGAGGGCGGGAGAAAAGGAAAGCAATCTACACAGTTAGTGGGA
TTTTATTTTAAATTAGGGCAAACTTCGTACACTTTTAGTTAAGGAGAATGTGTGCCCCAA
ATTGCACATTCAGATTGCCAAAACCTTCTATGATGGTAAGGACTGCTGTATGAAATGTAT
ACTGCAAATTCCCCCAAATCCACTCAAACTTTTTCTCCCTACAAATTAACATGTTGTAAT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               1-117, - strand, RNAz p=0.991112

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-117, - strand, RNAz p=0.991112

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-185, gnl|bosTau2|chr11 (19099236-19099050)
               

               
               1-185, gnl|Hg17|chr2 (37585820-37585634)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-185, gnl|bosTau2|chr11 (19099236-19099050)
               

               
               1-185, gnl|Hg17|chr2 (37585820-37585634)

	1-185, gnl\|bosTau2\|chr11 (19099236-19099050)
	1-185, gnl\|Hg17\|chr2 (37585820-37585634)