Ss1.1-Pig4-TMW8050L14.5
|
CAAACTTTTTACTTTTAAATCAGGTGACTTATAAACGTACCAAAAGAATATGGCTACACA
AATACCAGAATCTGATCAGATAAAACAGGTAAGGTATTATAATTAAGGGAAAAACGATTT
TGAAAAAAATTTAAGGTACTACTGAATACAACTTATCAGTGATCTCCCAAAATAACTATA
TTTCATTTCTACAAATGAATAATAAATGATATGAAACATGTTTATTTTTCAGGTAATTTG
AAAGATAATCCAGGAAAGAACAGACATTCAGCTACAAAATCTGACTATACTTTGTAGGCC
ATATTATGCACATCATACTACATATCCATTCAAGCTTGCAAAAGAATTTTTGAGTTCAAA
TATTATAGGATGTTTTGCCTGAATACATCAGTAATTAAAACATCTTTGTTTTGAAAATCA
TATGTTAAAGGACCTTCTCATTTGTTTGTAGTTTAAGGAATTTCTTGGAACCTACAATAA
ACTTACAGAAACCTGCTTTTTGGACTGTGTTAAAGACTTCACAACAAGAGAAGTAAAACC
TGAAGAGGTATGAAGAGTGTTGCCTATTCAGATTCTCTAAGCTCATCATAAATAATATAA
ATTGGATCCTCCTAAGCATTTTGCTTATTTCTAATTATTATAGGAACTTAGCCTACCTTT
TGTATGTTCCATTGCTCAGAGGACATGAAGCAGCCAAGGACTCATTGAGTTTAATTATGA
CATTGAGTTTAATTATGCCAAATTTAATATGAGAGCTACATTGAACTATGGCAGACTTTT
TTAGACAATATGTCTAGGACTTGCTGAATATATTGTTCTGTTAGCAAAGTTTTGTTTTTT
TTTTTTTTTTAA------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------AGAATTCCTTAA
AGATTCTTAATAATTAGCTTTTGGTCAAGATGGCCAGGCTAGAGAAACTTGACATGACTT
TCCTATCTGACCCTGAGAGCTCAGATTAATTCTGGAAAAAGAGCTTGAATCTGGTGGCTC
ATATTGGGTAGA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CAAACTTTTTACTTTTAAATCAGGTGACTTATAAACGTACCAAAAGAATATGGCTACACA
AATACCAGAATCTGATCAGATAAAACAGGTAAGGTATTATAATTAAGGGAAAAACGATTT
TGAAAAAAATTTAAGGTACTACTGAATACAACTTATCAGTGATCTCCCAAAATAACTATA
TTTCATTTCTACAAATGAATAATAAATGATATGAAACATGTTTATTTTTCAGGTAATTTG
AAAGATAATCCAGGAAAGAACAGACATTCAGCTACAAAATCTGACTATACTTTGTAGGCC
ATATTATGCACATCATACTACATATCCATTCAAGCTTGCAAAAGAATTTTTGAGTTCAAA
TATTATAGGATGTTTTGCCTGAATACATCAGTAATTAAAACATCTTTGTTTTGAAAATCA
TATGTTAAAGGACCTTCTCATTTGTTTGTAGTTTAAGGAATTTCTTGGAACCTACAATAA
ACTTACAGAAACCTGCTTTTTGGACTGTGTTAAAGACTTCACAACAAGAGAAGTAAAACC
TGAAGAGGTATGAAGAGTGTTGCCTATTCAGATTCTCTAAGCTCATCATAAATAATATAA
ATTGGATCCTCCTAAGCATTTTGCTTATTTCTAATTATTATAGGAACTTAGCCTACCTTT
TGTATGTTCCATTGCTCAGAGGACATGAAGCAGCCAAGGACTCATTGAGTTTAATTATGA
CATTGAGTTTAATTATGCCAAATTTAATATGAGAGCTACATTGAACTATGGCAGACTTTT
TTAGACAATATGTCTAGGACTTGCTGAATATATTGTTCTGTTAGCAAAGTTTTGTTTTTT
TTTTTTTTTTAA------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------AGAATTCCTTAA
AGATTCTTAATAATTAGCTTTTGGTCAAGATGGCCAGGCTAGAGAAACTTGACATGACTT
TCCTATCTGACCCTGAGAGCTCAGATTAATTCTGGAAAAAGAGCTTGAATCTGGTGGCTC
ATATTGGGTAGA
|
|
2-661, gnl|bosTau2|chr10 (47970941-47971579) |
|
2-661, gnl|Hg17|chr14 (57948467-57947201) |
| |
|
857-996, gnl|bosTau2|chr10 (47972741-47972883) |
|
857-996, gnl|canFam2|chr8 (36787712-36787807) |
|
857-996, gnl|dasNov1|scaffold_91672 (3141-3235) |
|
857-996, gnl|echTel1|scaffold_92495 (223-139) |
|
857-996, gnl|hg17|chr14 (57946931-57947025) |
|
857-996, gnl|Hg17|chr14 (57947046-57946926) |
|
857-996, gnl|mm7|chr12 (69068825-69068904) |
|
857-996, gnl|monDom2|scaffold_8 (70448834-70448925) |
|
857-996, gnl|panTro1|chr15 (57505194-57505288) |
|
857-996, gnl|rheMac2|chr7 (121418116-121418210) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
2-661, gnl|bosTau2|chr10 (47970941-47971579) |
|
2-661, gnl|Hg17|chr14 (57948467-57947201) |
| |
|
857-996, gnl|bosTau2|chr10 (47972741-47972883) |
|
857-996, gnl|canFam2|chr8 (36787712-36787807) |
|
857-996, gnl|dasNov1|scaffold_91672 (3141-3235) |
|
857-996, gnl|echTel1|scaffold_92495 (223-139) |
|
857-996, gnl|hg17|chr14 (57946931-57947025) |
|
857-996, gnl|Hg17|chr14 (57947046-57946926) |
|
857-996, gnl|mm7|chr12 (69068825-69068904) |
|
857-996, gnl|monDom2|scaffold_8 (70448834-70448925) |
|
857-996, gnl|panTro1|chr15 (57505194-57505288) |
|
857-996, gnl|rheMac2|chr7 (121418116-121418210) |
