Ss1.1-Pig4-TMW8050M06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGTCGGGAGCGCGCGAGGAGCCGGGTGACTGAGACCGGGTTTAGAGCCGCCTACCTGCAG TCGTCGCCCACGGCCGGGCCGCCACCATGGCGCTTCTGCTGCGCTTCGTGCTCCTGTGTG GAGTCGCGGATCTCACCAGAAGTTTGAGTATCACTACTCCTGAACAGATGATTGAAAAGG CCAAAGGGGAAACTGCCTATTTGCCGTGCAGATTTACCCTGGGTCCAGAAGACCAGGGGC CGCTGGACATCGAGTGGCTGCTGTCACCAGCTGATAATCAGAAGGTGGATCAAGTGATTA TTTTATATTCTGGAGACAAAATTTATGACGACTACTACCAAGATCTGAAAGGACGAGTAC ATTTTACAAGTAATGATCTCAAATCTGGTGATGCATCAATAAATGTAACAAATCTACAGT TGTCAGATATTGGCACATATCAGTGCAAAGTGAAAAAGGCTCCTGGTGTTGGAAATAAGA AGATTCAGCTGACAGTTCTTCTTAAGCCTTCAGGTACAAGATGTTATGTTGATGGATCAG AAGAAATTGGAAATGACTTTAAACTAAAATGTGAACCAAAAGAAGGTTCACTCCCATTAC TATATGAATGGCAGAAATTGTCCAATTCACAGAAGCTGCCCACCTTGTGGTTAGCAGAAA TGACTTCACCTGTTATATCTGTAAAAAATGCCTCTACTGAATACTCTGGGACATACAGCT GTACCGTGAAAAACAGAGTGGGCTCTGATCAATGCCTGCTTCGCCTGGATGTGGTTCCTC CTTCAAATAGAGCTGGAACAATTGCAGGAGCTGTTATAGGAGTTTTGCTTGCTCTAGTGC TCATTGGTCTTATTGTGTTTTGCTGTCATAAAAAGCGCAGAGAAGAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGTCGGGAGCGCGCGAGGAGCCGGGTGACTGAGACCGGGTTTAGAGCCGCCTACCTGCAG TCGTCGCCCACGGCCGGGCCGCCACCATGGCGCTTCTGCTGCGCTTCGTGCTCCTGTGTG GAGTCGCGGATCTCACCAGAAGTTTGAGTATCACTACTCCTGAACAGATGATTGAAAAGG CCAAAGGGGAAACTGCCTATTTGCCGTGCAGATTTACCCTGGGTCCAGAAGACCAGGGGC CGCTGGACATCGAGTGGCTGCTGTCACCAGCTGATAATCAGAAGGTGGATCAAGTGATTA TTTTATATTCTGGAGACAAAATTTATGACGACTACTACCAAGATCTGAAAGGACGAGTAC ATTTTACAAGTAATGATCTCAAATCTGGTGATGCATCAATAAATGTAACAAATCTACAGT TGTCAGATATTGGCACATATCAGTGCAAAGTGAAAAAGGCTCCTGGTGTTGGAAATAAGA AGATTCAGCTGACAGTTCTTCTTAAGCCTTCAGGTACAAGATGTTATGTTGATGGATCAG AAGAAATTGGAAATGACTTTAAACTAAAATGTGAACCAAAAGAAGGTTCACTCCCATTAC TATATGAATGGCAGAAATTGTCCAATTCACAGAAGCTGCCCACCTTGTGGTTAGCAGAAA TGACTTCACCTGTTATATCTGTAAAAAATGCCTCTACTGAATACTCTGGGACATACAGCT GTACCGTGAAAAACAGAGTGGGCTCTGATCAATGCCTGCTTCGCCTGGATGTGGTTCCTC CTTCAAATAGAGCTGGAACAATTGCAGGAGCTGTTATAGGAGTTTTGCTTGCTCTAGTGC TCATTGGTCTTATTGTGTTTTGCTGTCATAAAAAGCGCAGAGAAGAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 99 entry(ies) | More info |
| Aligned organism(s): 99 entry(ies) | Help | Less info |
| 1-129, gnl|bosTau2|chr1 (10817433-10817563) | |
| 1-129, gnl|Hg17|chr21 (17807232-17807361) | |
| 1-129, gnl|Mm7|chr16 (78298901-78299029) | |
| 296-506, gnl|bosTau2|chr1 (11040144-11039934) | |
| 296-506, gnl|canFam2|chr31 (17060666-17060866) | |
| 296-506, gnl|canFam2|chr31 (17060867-17060666) | |
| 296-506, gnl|canFam2|chr31 (17060872-17060663) | |
| 296-506, gnl|danRer3|chr10 (22037813-22038013) | |
| 296-506, gnl|danRer3|chr10 (22038014-22037810) | |
| 296-506, gnl|danRer3|chr10 (22038019-22037810) | |
| 296-506, gnl|dasNov1|scaffold_58525 (1367-1167) | |
| 296-506, gnl|dasNov1|scaffold_58525 (1166-1367) | |
| 296-506, gnl|dasNov1|scaffold_58525 (1161-1370) | |
| 296-506, gnl|echTel1|scaffold_115074 (855-1050) | |
| 296-506, gnl|echTel1|scaffold_115074 (1050-855) | |
| 296-506, gnl|echTel1|scaffold_115074 (1050-851) | |
| 296-506, gnl|fr1|chrUn (248729901-248730101) | |
| 296-506, gnl|fr1|chrUn (248730102-248729898) | |
| 296-506, gnl|fr1|chrUn (248730107-248729898) | |
| 296-506, gnl|galGal2|chr1 (93199594-93199794) | |
| 296-506, gnl|galGal2|chr1 (93199795-93199594) | |
| 296-506, gnl|galGal2|chr1 (93199800-93199590) | |
| 296-506, gnl|hg17|chr15 (19269756-19269966) | |
| 296-506, gnl|hg17|chr18 (14468852-14469057) | |
| 296-506, gnl|hg17|chr21 (13970427-13970624) | |
| 296-506, gnl|Hg17|chr21 (17845937-17846147) | |
| 296-506, gnl|loxAfr1|scaffold_12869 (43129-43324) | |
| 296-506, gnl|loxAfr1|scaffold_12869 (43324-43126) | |
| 296-506, gnl|loxAfr1|scaffold_56399 (10835-11021) | |
| 296-506, gnl|mm7|chr16 (78326113-78326313) | |
| 296-506, gnl|mm7|chr16 (78326313-78326113) | |
| 296-506, gnl|mm7|chr16 (78326315-78326109) | |
| 296-506, gnl|Mm7|chr16 (78326108-78326318) | |
| 296-506, gnl|monDom2|scaffold_8 (86827938-86828148) | |
| 296-506, gnl|monDom2|scaffold_8 (86828149-86827935) | |
| 296-506, gnl|monDom2|scaffold_8 (86828154-86827934) | |
| 296-506, gnl|oryCun1|scaffold_149009 (6762-6955) | |
| 296-506, gnl|oryCun1|scaffold_149009 (6956-6759) | |
| 296-506, gnl|oryCun1|scaffold_149009 (6961-6758) | |
| 296-506, gnl|panTro1|chr22_random (1654989-1654789) | |
| 296-506, gnl|panTro1|chr22_random (1654788-1654992) | |
| 296-506, gnl|panTro1|chr22_random (1654783-1654993) | |
| 296-506, gnl|rheMac2|chr3 (29382063-29381863) | |
| 296-506, gnl|rheMac2|chr3 (29381863-29382063) | |
| 296-506, gnl|rheMac2|chr3 (29381861-29382066) | |
| 296-506, gnl|rn3|chr11 (17220682-17220882) | |
| 296-506, gnl|rn3|chr11 (17220882-17220683) | |
| 296-506, gnl|rn3|chr11 (17220884-17220679) | |
| 296-506, gnl|tetNig1|chrUn_random (11556428-11556228) | |
| 296-506, gnl|tetNig1|chrUn_random (11556227-11556429) | |
| 296-506, gnl|tetNig1|chrUn_random (11556222-11556429) | |
| 296-506, gnl|xenTro1|scaffold_116 (1006679-1006488) | |
| 296-506, gnl|xenTro1|scaffold_116 (1006487-1006685) | |
| 296-506, gnl|xenTro1|scaffold_116 (1006482-1006689) | |
| 656-780, gnl|bosTau2|chr1 (11030841-11030717) | |
| 656-780, gnl|Hg17|chr21 (17854889-17855013) | |
| 656-780, gnl|Mm7|chr16 (78331322-78331446) | |
| 781-888, gnl|bosTau2|chr1 (11029935-11029828) | |
| 781-888, gnl|canFam2|chr31 (17068489-17068596) | |
| 781-888, gnl|canFam2|chr31 (17068596-17068489) | |
| 781-888, gnl|canFam2|chr31 (17068596-17068489) | |
| 781-888, gnl|danRer3|chr10 (22044872-22044974) | |
| 781-888, gnl|danRer3|chr10 (22044974-22044872) | |
| 781-888, gnl|danRer3|chr10 (22044974-22044872) | |
| 781-888, gnl|dasNov1|scaffold_12711 (4394-4501) | |
| 781-888, gnl|dasNov1|scaffold_12711 (4501-4394) | |
| 781-888, gnl|dasNov1|scaffold_12711 (4501-4394) | |
| 781-888, gnl|galGal2|chr1 (93202814-93202921) | |
| 781-888, gnl|galGal2|chr1 (93202921-93202814) | |
| 781-888, gnl|galGal2|chr1 (93202921-93202814) | |
| 781-888, gnl|hg17|chr15 (19269376-19269483) | |
| 781-888, gnl|hg17|chr18 (14468464-14468571) | |
| 781-888, gnl|hg17|chr21 (13970906-13971013) | |
| 781-888, gnl|Hg17|chr21 (17855527-17855634) | |
| 781-888, gnl|loxAfr1|scaffold_5278 (20861-20968) | |
| 781-888, gnl|loxAfr1|scaffold_5278 (20968-20861) | |
| 781-888, gnl|loxAfr1|scaffold_5278 (20968-20861) | |
| 781-888, gnl|mm7|chr16 (78331978-78332085) | |
| 781-888, gnl|mm7|chr16 (78332085-78331978) | |
| 781-888, gnl|mm7|chr16 (78332085-78331978) | |
| 781-888, gnl|Mm7|chr16 (78331977-78332084) | |
| 781-888, gnl|monDom2|scaffold_8 (86828443-86828550) | |
| 781-888, gnl|monDom2|scaffold_8 (86828550-86828443) | |
| 781-888, gnl|monDom2|scaffold_8 (86828550-86828443) | |
| 781-888, gnl|oryCun1|scaffold_189874 (8807-8700) | |
| 781-888, gnl|oryCun1|scaffold_189874 (8700-8807) | |
| 781-888, gnl|oryCun1|scaffold_189874 (8700-8807) | |
| 781-888, gnl|panTro1|chr22 (17968572-17968679) | |
| 781-888, gnl|panTro1|chr22 (17968679-17968572) | |
| 781-888, gnl|panTro1|chr22 (17968679-17968572) | |
| 781-888, gnl|rheMac2|chr3 (29372153-29372046) | |
| 781-888, gnl|rheMac2|chr3 (29372046-29372153) | |
| 781-888, gnl|rheMac2|chr3 (29372046-29372153) | |
| 781-888, gnl|rn3|chr11 (17226434-17226541) | |
| 781-888, gnl|rn3|chr11 (17226541-17226434) | |
| 781-888, gnl|rn3|chr11 (17226541-17226434) | |
| 781-888, gnl|xenTro1|scaffold_116 (1003998-1003891) | |
| 781-888, gnl|xenTro1|scaffold_116 (1003891-1003998) | |
| 781-888, gnl|xenTro1|scaffold_116 (1003891-1003998) |
| Aligned organism(s): 99 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-129, gnl|bosTau2|chr1 (10817433-10817563) | |
| 1-129, gnl|Hg17|chr21 (17807232-17807361) | |
| 1-129, gnl|Mm7|chr16 (78298901-78299029) | |
| 296-506, gnl|bosTau2|chr1 (11040144-11039934) | |
| 296-506, gnl|canFam2|chr31 (17060666-17060866) | |
| 296-506, gnl|canFam2|chr31 (17060867-17060666) | |
| 296-506, gnl|canFam2|chr31 (17060872-17060663) | |
| 296-506, gnl|danRer3|chr10 (22037813-22038013) | |
| 296-506, gnl|danRer3|chr10 (22038014-22037810) | |
| 296-506, gnl|danRer3|chr10 (22038019-22037810) | |
| 296-506, gnl|dasNov1|scaffold_58525 (1367-1167) | |
| 296-506, gnl|dasNov1|scaffold_58525 (1166-1367) | |
| 296-506, gnl|dasNov1|scaffold_58525 (1161-1370) | |
| 296-506, gnl|echTel1|scaffold_115074 (855-1050) | |
| 296-506, gnl|echTel1|scaffold_115074 (1050-855) | |
| 296-506, gnl|echTel1|scaffold_115074 (1050-851) | |
| 296-506, gnl|fr1|chrUn (248729901-248730101) | |
| 296-506, gnl|fr1|chrUn (248730102-248729898) | |
| 296-506, gnl|fr1|chrUn (248730107-248729898) | |
| 296-506, gnl|galGal2|chr1 (93199594-93199794) | |
| 296-506, gnl|galGal2|chr1 (93199795-93199594) | |
| 296-506, gnl|galGal2|chr1 (93199800-93199590) | |
| 296-506, gnl|hg17|chr15 (19269756-19269966) | |
| 296-506, gnl|hg17|chr18 (14468852-14469057) | |
| 296-506, gnl|hg17|chr21 (13970427-13970624) | |
| 296-506, gnl|Hg17|chr21 (17845937-17846147) | |
| 296-506, gnl|loxAfr1|scaffold_12869 (43129-43324) | |
| 296-506, gnl|loxAfr1|scaffold_12869 (43324-43126) | |
| 296-506, gnl|loxAfr1|scaffold_56399 (10835-11021) | |
| 296-506, gnl|mm7|chr16 (78326113-78326313) | |
| 296-506, gnl|mm7|chr16 (78326313-78326113) | |
| 296-506, gnl|mm7|chr16 (78326315-78326109) | |
| 296-506, gnl|Mm7|chr16 (78326108-78326318) | |
| 296-506, gnl|monDom2|scaffold_8 (86827938-86828148) | |
| 296-506, gnl|monDom2|scaffold_8 (86828149-86827935) | |
| 296-506, gnl|monDom2|scaffold_8 (86828154-86827934) | |
| 296-506, gnl|oryCun1|scaffold_149009 (6762-6955) | |
| 296-506, gnl|oryCun1|scaffold_149009 (6956-6759) | |
| 296-506, gnl|oryCun1|scaffold_149009 (6961-6758) | |
| 296-506, gnl|panTro1|chr22_random (1654989-1654789) | |
| 296-506, gnl|panTro1|chr22_random (1654788-1654992) | |
| 296-506, gnl|panTro1|chr22_random (1654783-1654993) | |
| 296-506, gnl|rheMac2|chr3 (29382063-29381863) | |
| 296-506, gnl|rheMac2|chr3 (29381863-29382063) | |
| 296-506, gnl|rheMac2|chr3 (29381861-29382066) | |
| 296-506, gnl|rn3|chr11 (17220682-17220882) | |
| 296-506, gnl|rn3|chr11 (17220882-17220683) | |
| 296-506, gnl|rn3|chr11 (17220884-17220679) | |
| 296-506, gnl|tetNig1|chrUn_random (11556428-11556228) | |
| 296-506, gnl|tetNig1|chrUn_random (11556227-11556429) | |
| 296-506, gnl|tetNig1|chrUn_random (11556222-11556429) | |
| 296-506, gnl|xenTro1|scaffold_116 (1006679-1006488) | |
| 296-506, gnl|xenTro1|scaffold_116 (1006487-1006685) | |
| 296-506, gnl|xenTro1|scaffold_116 (1006482-1006689) | |
| 656-780, gnl|bosTau2|chr1 (11030841-11030717) | |
| 656-780, gnl|Hg17|chr21 (17854889-17855013) | |
| 656-780, gnl|Mm7|chr16 (78331322-78331446) | |
| 781-888, gnl|bosTau2|chr1 (11029935-11029828) | |
| 781-888, gnl|canFam2|chr31 (17068489-17068596) | |
| 781-888, gnl|canFam2|chr31 (17068596-17068489) | |
| 781-888, gnl|canFam2|chr31 (17068596-17068489) | |
| 781-888, gnl|danRer3|chr10 (22044872-22044974) | |
| 781-888, gnl|danRer3|chr10 (22044974-22044872) | |
| 781-888, gnl|danRer3|chr10 (22044974-22044872) | |
| 781-888, gnl|dasNov1|scaffold_12711 (4394-4501) | |
| 781-888, gnl|dasNov1|scaffold_12711 (4501-4394) | |
| 781-888, gnl|dasNov1|scaffold_12711 (4501-4394) | |
| 781-888, gnl|galGal2|chr1 (93202814-93202921) | |
| 781-888, gnl|galGal2|chr1 (93202921-93202814) | |
| 781-888, gnl|galGal2|chr1 (93202921-93202814) | |
| 781-888, gnl|hg17|chr15 (19269376-19269483) | |
| 781-888, gnl|hg17|chr18 (14468464-14468571) | |
| 781-888, gnl|hg17|chr21 (13970906-13971013) | |
| 781-888, gnl|Hg17|chr21 (17855527-17855634) | |
| 781-888, gnl|loxAfr1|scaffold_5278 (20861-20968) | |
| 781-888, gnl|loxAfr1|scaffold_5278 (20968-20861) | |
| 781-888, gnl|loxAfr1|scaffold_5278 (20968-20861) | |
| 781-888, gnl|mm7|chr16 (78331978-78332085) | |
| 781-888, gnl|mm7|chr16 (78332085-78331978) | |
| 781-888, gnl|mm7|chr16 (78332085-78331978) | |
| 781-888, gnl|Mm7|chr16 (78331977-78332084) | |
| 781-888, gnl|monDom2|scaffold_8 (86828443-86828550) | |
| 781-888, gnl|monDom2|scaffold_8 (86828550-86828443) | |
| 781-888, gnl|monDom2|scaffold_8 (86828550-86828443) | |
| 781-888, gnl|oryCun1|scaffold_189874 (8807-8700) | |
| 781-888, gnl|oryCun1|scaffold_189874 (8700-8807) | |
| 781-888, gnl|oryCun1|scaffold_189874 (8700-8807) | |
| 781-888, gnl|panTro1|chr22 (17968572-17968679) | |
| 781-888, gnl|panTro1|chr22 (17968679-17968572) | |
| 781-888, gnl|panTro1|chr22 (17968679-17968572) | |
| 781-888, gnl|rheMac2|chr3 (29372153-29372046) | |
| 781-888, gnl|rheMac2|chr3 (29372046-29372153) | |
| 781-888, gnl|rheMac2|chr3 (29372046-29372153) | |
| 781-888, gnl|rn3|chr11 (17226434-17226541) | |
| 781-888, gnl|rn3|chr11 (17226541-17226434) | |
| 781-888, gnl|rn3|chr11 (17226541-17226434) | |
| 781-888, gnl|xenTro1|scaffold_116 (1003998-1003891) | |
| 781-888, gnl|xenTro1|scaffold_116 (1003891-1003998) | |
| 781-888, gnl|xenTro1|scaffold_116 (1003891-1003998) |