Ss1.1-Pig4-TMW8050M10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGGGCCTGGGTAAGACCTGCCAGACTATTGCTGTCTTCATTTACTTGGCAGGGAGATTAA ATGATGAAGGACCATTTTTGATTCTTTGTCCCTTGTCTGTCTTGAGCAACTGGAAAGAAG AGATGGAGAGGTGTGCTCCAGGTCTTTGCTGTGTGACATATGCAGGTGACAAGGAGGAGA GAGCCCACCTACAGCAAGACCTAAAGCAGGAGTCAGGTTTTCATGTGCTGCTAACTACCT ACGAGATTTGCTTGAAAGATGCATCATTTCTAAAGTCCTTCCCTTGGAGTGTTCTTGTCG TGGATGAAGCTCACAGGTTGAAAAACCAAAACTCCTTGCTGCATAAATCACTTTCAGAGT TCTCAGTTGCCTTCCGTCTCCTGCTGACCGGAACGCCCATCCAGAACAGCCTCCAAGAGC TCTACTCTCTGCTCAGTTTTGTGGAGCCTGATCTCTTTTCCAAGGAGGAGGTGGAAGATT TTGTGCAGCGTTATGAGGATATTGAGAAAGAGTCTGAGTCAGCAAGTGAACTCTACAAAC TCTTGCAGCCATTTCTGCTGAGGCGAGTGAAAGCGGAGGTAGCTGCAGAGCTTCCCAAGA AGACAGAAGTAGTGATATATCATGGCATGTCAGCACTACAGAAAAAATACTACAAGGCTA TTTTGATGAAGGACCTAGATGCATTTGAAAATGAGATGGCAAAAAAAAGTTAAACTTCAG AATGTCTTGTCCCAACTTCGAAAGTGTGTGGATCACCCATATTTGTTTGATGGTGAGGCA GTGCCCTTTTTTCTCCTATTACTTTTCATTGTCATTTCTGTGGCCAACCTAATAGCAAAA TTCTTCAAAAGATTTGCCTTTTTTACTGTCTGTTTCCCCAGATTTTCTCATTAATTTTTT TGTATGAATGTTATCTAATGTTCATATTTCTTCAGTTGTGCCCTTTATGACTTTGTTTTT CTTTTTTCTTTTTATATTCAAGATGTAGTTATAGATCCTACACTACATTTATCATGTCTC TTTATTTTCCTATAAATCCGCAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGGGCCTGGGTAAGACCTGCCAGACTATTGCTGTCTTCATTTACTTGGCAGGGAGATTAA ATGATGAAGGACCATTTTTGATTCTTTGTCCCTTGTCTGTCTTGAGCAACTGGAAAGAAG AGATGGAGAGGTGTGCTCCAGGTCTTTGCTGTGTGACATATGCAGGTGACAAGGAGGAGA GAGCCCACCTACAGCAAGACCTAAAGCAGGAGTCAGGTTTTCATGTGCTGCTAACTACCT ACGAGATTTGCTTGAAAGATGCATCATTTCTAAAGTCCTTCCCTTGGAGTGTTCTTGTCG TGGATGAAGCTCACAGGTTGAAAAACCAAAACTCCTTGCTGCATAAATCACTTTCAGAGT TCTCAGTTGCCTTCCGTCTCCTGCTGACCGGAACGCCCATCCAGAACAGCCTCCAAGAGC TCTACTCTCTGCTCAGTTTTGTGGAGCCTGATCTCTTTTCCAAGGAGGAGGTGGAAGATT TTGTGCAGCGTTATGAGGATATTGAGAAAGAGTCTGAGTCAGCAAGTGAACTCTACAAAC TCTTGCAGCCATTTCTGCTGAGGCGAGTGAAAGCGGAGGTAGCTGCAGAGCTTCCCAAGA AGACAGAAGTAGTGATATATCATGGCATGTCAGCACTACAGAAAAAATACTACAAGGCTA TTTTGATGAAGGACCTAGATGCATTTGAAAATGAGATGGCAAAAAAAAGTTAAACTTCAG AATGTCTTGTCCCAACTTCGAAAGTGTGTGGATCACCCATATTTGTTTGATGGTGAGGCA GTGCCCTTTTTTCTCCTATTACTTTTCATTGTCATTTCTGTGGCCAACCTAATAGCAAAA TTCTTCAAAAGATTTGCCTTTTTTACTGTCTGTTTCCCCAGATTTTCTCATTAATTTTTT TGTATGAATGTTATCTAATGTTCATATTTCTTCAGTTGTGCCCTTTATGACTTTGTTTTT CTTTTTTCTTTTTATATTCAAGATGTAGTTATAGATCCTACACTACATTTATCATGTCTC TTTATTTTCCTATAAATCCGCAAA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 20-109, + strand, RNAz p=0.5236 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 20-109, + strand, RNAz p=0.5236 |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 20-132, gnl|bosTau2|chr3 (19929124-19929012) | |
| 20-132, gnl|canFam2|chr17 (60825720-60825830) | |
| 20-132, gnl|danRer3|chr6 (18856972-18856862) | |
| 20-132, gnl|dasNov1|scaffold_32477 (41376-41483) | |
| 20-132, gnl|echTel1|scaffold_291755 (73475-73365) | |
| 20-132, gnl|fr1|chrUn (42258254-42258382) | |
| 20-132, gnl|galGal2|chr1 (74675766-74675654) | |
| 20-132, gnl|hg17|chr1 (143951329-143951439) | |
| 20-132, gnl|Hg17|chr1 (143951337-143951449) | |
| 20-132, gnl|loxAfr1|scaffold_95639 (1024-914) | |
| 20-132, gnl|mm7|chr3 (97475071-97474961) | |
| 20-132, gnl|Mm7|chr3 (97475061-97474949) | |
| 20-132, gnl|panTro1|chr1 (126452881-126452991) | |
| 20-132, gnl|rheMac2|chr1 (126648178-126648288) | |
| 20-132, gnl|rn3|chr2 (192394741-192394631) | |
| 20-132, gnl|tetNig1|chr1_random (1309110-1309210) | |
| 357-527, gnl|bosTau2|chr3 (19919843-19919672) | |
| 357-527, gnl|canFam2|chr17 (60840966-60841086) | |
| 357-527, gnl|danRer3|chr6 (18852530-18852420) | |
| 357-527, gnl|dasNov1|scaffold_37127 (41313-41193) | |
| 357-527, gnl|echTel1|scaffold_223955 (1699-1819) | |
| 357-527, gnl|fr1|chrUn (42258988-42259098) | |
| 357-527, gnl|galGal2|chr1 (74670620-74670500) | |
| 357-527, gnl|hg17|chr1 (143960889-143961009) | |
| 357-527, gnl|Hg17|chr1 (143960894-143961065) | |
| 357-527, gnl|loxAfr1|scaffold_6690 (73013-72893) | |
| 357-527, gnl|mm7|chr3 (97465471-97465351) | |
| 357-527, gnl|Mm7|chr3 (97465464-97465293) | |
| 357-527, gnl|monDom2|scaffold_44 (1084095-1084214) | |
| 357-527, gnl|oryCun1|scaffold_177283 (66845-66953) | |
| 357-527, gnl|panTro1|chr1 (126462469-126462589) | |
| 357-527, gnl|rheMac2|chr1 (126658124-126658244) | |
| 357-527, gnl|rn3|chr2 (192385958-192385838) | |
| 357-527, gnl|tetNig1|chr1_random (1309768-1309878) | |
| 677-992, gnl|bosTau2|chr3 (19917573-19917249) | |
| 677-992, gnl|Hg17|chr1 (143963899-143964200) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 20-132, gnl|bosTau2|chr3 (19929124-19929012) | |
| 20-132, gnl|canFam2|chr17 (60825720-60825830) | |
| 20-132, gnl|danRer3|chr6 (18856972-18856862) | |
| 20-132, gnl|dasNov1|scaffold_32477 (41376-41483) | |
| 20-132, gnl|echTel1|scaffold_291755 (73475-73365) | |
| 20-132, gnl|fr1|chrUn (42258254-42258382) | |
| 20-132, gnl|galGal2|chr1 (74675766-74675654) | |
| 20-132, gnl|hg17|chr1 (143951329-143951439) | |
| 20-132, gnl|Hg17|chr1 (143951337-143951449) | |
| 20-132, gnl|loxAfr1|scaffold_95639 (1024-914) | |
| 20-132, gnl|mm7|chr3 (97475071-97474961) | |
| 20-132, gnl|Mm7|chr3 (97475061-97474949) | |
| 20-132, gnl|panTro1|chr1 (126452881-126452991) | |
| 20-132, gnl|rheMac2|chr1 (126648178-126648288) | |
| 20-132, gnl|rn3|chr2 (192394741-192394631) | |
| 20-132, gnl|tetNig1|chr1_random (1309110-1309210) | |
| 357-527, gnl|bosTau2|chr3 (19919843-19919672) | |
| 357-527, gnl|canFam2|chr17 (60840966-60841086) | |
| 357-527, gnl|danRer3|chr6 (18852530-18852420) | |
| 357-527, gnl|dasNov1|scaffold_37127 (41313-41193) | |
| 357-527, gnl|echTel1|scaffold_223955 (1699-1819) | |
| 357-527, gnl|fr1|chrUn (42258988-42259098) | |
| 357-527, gnl|galGal2|chr1 (74670620-74670500) | |
| 357-527, gnl|hg17|chr1 (143960889-143961009) | |
| 357-527, gnl|Hg17|chr1 (143960894-143961065) | |
| 357-527, gnl|loxAfr1|scaffold_6690 (73013-72893) | |
| 357-527, gnl|mm7|chr3 (97465471-97465351) | |
| 357-527, gnl|Mm7|chr3 (97465464-97465293) | |
| 357-527, gnl|monDom2|scaffold_44 (1084095-1084214) | |
| 357-527, gnl|oryCun1|scaffold_177283 (66845-66953) | |
| 357-527, gnl|panTro1|chr1 (126462469-126462589) | |
| 357-527, gnl|rheMac2|chr1 (126658124-126658244) | |
| 357-527, gnl|rn3|chr2 (192385958-192385838) | |
| 357-527, gnl|tetNig1|chr1_random (1309768-1309878) | |
| 677-992, gnl|bosTau2|chr3 (19917573-19917249) | |
| 677-992, gnl|Hg17|chr1 (143963899-143964200) |