Ss1.1-Pig4-TMW8050P18.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACACAGCAACCTGACCAAAGCAGCCCCCGCCGCCGGTCCCGGGCCGGACTGCGGCGGCGT CCCAGAACCCACGGGGCTGGACGCAGCTTGCACCAAATTGCAATCTTTGCAGAGACTTTT CGAGCCGACCACCCCAGCGCCCCCTCTGCGGCCCCCGGACTCCCCCTCCCGTGCCCCGGC CGAGTTCCCCACCGCCAAAAAAAACTTGCTCAAAGGCCACTTTCGGAACTTCACTCTTTC CTTTTGCGACACCTACACGGTCTGGGACTTGCTGCTGGGCATGGACCGCCCCGACAGCCT GGACTGCAGCCTGGACACCCTGCTGGGGGACCTGCTGGCCGTGGTGGCTAGCCCGGGCTC CGGGGCCTGGGAGGTGTGTAGCAACTGTATCGAGGCGTACCAGCGGCTCGACCGACATGC TCAGGAAAAATATGACGAGTTCGACCTCGTGCTGCATAAATACTTACAGGCAGAAGAGTA CTCAATCCGGTCCTGCACGAAAGGCTGTAAGGCTGTCTACAAGGCCTGGCTGTGCTCAGA ATACTTCAGCGTGACCCAGCAGGAATGCCAGCGCTGGGTGCCCTGCAAGCAATACTGCCT GGAGGTGCAGACCCGGTGCCCCTTTATCCTCCCCGACAATGAGGAAATGGTATATGGAGG ACTCCCGGGCTTTATCTGTACAGGGTTGCTGGATACTTCGCCAAAGCGGCCGGAAACCAA GTGCTGTGACGTGCAGTGGGTCTCCTGTGAGTCGGAAAAGAAGAAGTTCAAGGAGACTGA AGCCCCCAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACACAGCAACCTGACCAAAGCAGCCCCCGCCGCCGGTCCCGGGCCGGACTGCGGCGGCGT CCCAGAACCCACGGGGCTGGACGCAGCTTGCACCAAATTGCAATCTTTGCAGAGACTTTT CGAGCCGACCACCCCAGCGCCCCCTCTGCGGCCCCCGGACTCCCCCTCCCGTGCCCCGGC CGAGTTCCCCACCGCCAAAAAAAACTTGCTCAAAGGCCACTTTCGGAACTTCACTCTTTC CTTTTGCGACACCTACACGGTCTGGGACTTGCTGCTGGGCATGGACCGCCCCGACAGCCT GGACTGCAGCCTGGACACCCTGCTGGGGGACCTGCTGGCCGTGGTGGCTAGCCCGGGCTC CGGGGCCTGGGAGGTGTGTAGCAACTGTATCGAGGCGTACCAGCGGCTCGACCGACATGC TCAGGAAAAATATGACGAGTTCGACCTCGTGCTGCATAAATACTTACAGGCAGAAGAGTA CTCAATCCGGTCCTGCACGAAAGGCTGTAAGGCTGTCTACAAGGCCTGGCTGTGCTCAGA ATACTTCAGCGTGACCCAGCAGGAATGCCAGCGCTGGGTGCCCTGCAAGCAATACTGCCT GGAGGTGCAGACCCGGTGCCCCTTTATCCTCCCCGACAATGAGGAAATGGTATATGGAGG ACTCCCGGGCTTTATCTGTACAGGGTTGCTGGATACTTCGCCAAAGCGGCCGGAAACCAA GTGCTGTGACGTGCAGTGGGTCTCCTGTGAGTCGGAAAAGAAGAAGTTCAAGGAGACTGA AGCCCCCAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 3-121, - strand, RNAz p=0.954779 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 3-121, - strand, RNAz p=0.954779 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 3-512, gnl|bosTau2|chr15 (5892359-5891850) | |
| 3-512, gnl|Hg17|chrX (68508499-68509008) | |
| 3-512, gnl|Mm7|chrX (95148776-95149282) | |
| 515-684, gnl|bosTau2|chr12 (44110940-44110771) | |
| 515-684, gnl|canFam2|chr22 (59119288-59119523) | |
| 515-684, gnl|danRer3|chrNA (39428224-39428442) | |
| 515-684, gnl|dasNov1|scaffold_11761 (45334-45571) | |
| 515-684, gnl|echTel1|scaffold_310996 (9891-10127) | |
| 515-684, gnl|fr1|chrUn (311525380-311525586) | |
| 515-684, gnl|galGal2|chr1 (133562284-133562062) | |
| 515-684, gnl|hg17|chr13 (106660912-106661150) | |
| 515-684, gnl|Hg17|chr13 (106661101-106660932) | |
| 515-684, gnl|loxAfr1|scaffold_6173 (25317-25552) | |
| 515-684, gnl|mm7|chr8 (9202799-9203044) | |
| 515-684, gnl|Mm7|chr8 (9202987-9202818) | |
| 515-684, gnl|monDom2|scaffold_11 (41640497-41640266) | |
| 515-684, gnl|oryCun1|scaffold_214203 (17425-17628) | |
| 515-684, gnl|panTro1|chr14 (90064874-90065112) | |
| 515-684, gnl|rheMac2|chr17 (87416153-87416389) | |
| 515-684, gnl|rn3|chrX (87918495-87918294) | |
| 515-684, gnl|tetNig1|chr2 (9658304-9658118) | |
| 515-684, gnl|xenTro1|scaffold_77 (973070-972859) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-512, gnl|bosTau2|chr15 (5892359-5891850) | |
| 3-512, gnl|Hg17|chrX (68508499-68509008) | |
| 3-512, gnl|Mm7|chrX (95148776-95149282) | |
| 515-684, gnl|bosTau2|chr12 (44110940-44110771) | |
| 515-684, gnl|canFam2|chr22 (59119288-59119523) | |
| 515-684, gnl|danRer3|chrNA (39428224-39428442) | |
| 515-684, gnl|dasNov1|scaffold_11761 (45334-45571) | |
| 515-684, gnl|echTel1|scaffold_310996 (9891-10127) | |
| 515-684, gnl|fr1|chrUn (311525380-311525586) | |
| 515-684, gnl|galGal2|chr1 (133562284-133562062) | |
| 515-684, gnl|hg17|chr13 (106660912-106661150) | |
| 515-684, gnl|Hg17|chr13 (106661101-106660932) | |
| 515-684, gnl|loxAfr1|scaffold_6173 (25317-25552) | |
| 515-684, gnl|mm7|chr8 (9202799-9203044) | |
| 515-684, gnl|Mm7|chr8 (9202987-9202818) | |
| 515-684, gnl|monDom2|scaffold_11 (41640497-41640266) | |
| 515-684, gnl|oryCun1|scaffold_214203 (17425-17628) | |
| 515-684, gnl|panTro1|chr14 (90064874-90065112) | |
| 515-684, gnl|rheMac2|chr17 (87416153-87416389) | |
| 515-684, gnl|rn3|chrX (87918495-87918294) | |
| 515-684, gnl|tetNig1|chr2 (9658304-9658118) | |
| 515-684, gnl|xenTro1|scaffold_77 (973070-972859) |