Non-Coding RNA Search

Ss1.1-Pig4-TMW8051B04.3

Sequence:


               
               TGTTTGTTTTTAGTGGGATTTTTTTTTTAAATCCTCAAACCTTAAATGGTCTCTCCCCTA
ATCTGTGTCCTGTAGACAGATTAGAGAATTTAATCTGCGTGGTATGTATGTCATCTAAGA
CTGAAATTTCAAACACAGGGTTTTAAGGAAAAAAAAAATCTCCATAATATAATAAAATGG
GGAGTAAAATATTGTTTTAAAATGTATTTTTTTTTACCATTAGGAGAAGTGGTTGGGATT
TCTCATGCTTAAGAGGCTAACAGGAAAAAAAAATGTATTAACTCTAGCTTATTTTTTTGC
TGTTGCCCATTTTTCTATGCACATAAATGAAATGTTCAGCCCTTTTCTGGTTTGTTTTAT
TAGAATGGGGTCAACTGACCCAAGAGGCCACATCCATTTTCATCCATTTAATGCATGGAT
ACAGTTTAGTTTAATTTGCTGATTTTGAAAACATCCACCTGCTGGTTTTTTTCAGGATGA
AATGTTACTATGTAACAAAGACAAGAAGTTTTAATGTGATGTTTCTGTTAAAATTTTATC
ATCATATTCACTTTAGCCAATTGAGGAAAAGAAAAAGGAGTTTTATAGTCAAAATCTGAA
ACAGATTTACTCAGTTGATTTCCACTTCAAAAATATGATGAAAATAGCTTATAAAATTAA
ACTTAACAGTAACTCCCTTTGCTGACTCAACAAACATAAAATTAGAAAGAAATAATAGGC
AATAAAGGCCTCCTAGCATTTATATTCTAATAATTCATGATCTAATGGAACTTTTATAAG
TGGCTCAAAAATGAATGAACACAAACTGCATATTTGTAAACATATTTTTCCCATTTTTCA
CTTGCTAAATTGGCTTTGCATAAATCAAGTCTTCATTGGGAAAATCCCTTGCTTCCAGAG
CAATAAAGCCTTAATTTTTTGGAATTACCCTAAACCAAGTAAAACAGATATTTTCTTTCT
TTAAAATGTCATTTCTCACCGTGTTTTTTTCTTTTTTTTTTTTTTACAGTCATAGACTAA
AAATACATTTTTGTTTTTAAAGGAGAAAGATTTAGCTTGAGGTGGCCCTTGAAAAATGCA
AATCCCAAAATGAAAAAGTTCTTTTTCTACTAGACATTGACAAAATTAAGAGACATCTCA
TCAATTAGAATAAGGCACAACTTTGTTATGTCAGTCTGTTGTTTTGTTCTTAGTTGTTAT
TTTTGTGTGCCCAGACTAACTCCCACCACCCCCAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTTTGTTTTTAGTGGGATTTTTTTTTTAAATCCTCAAACCTTAAATGGTCTCTCCCCTA
ATCTGTGTCCTGTAGACAGATTAGAGAATTTAATCTGCGTGGTATGTATGTCATCTAAGA
CTGAAATTTCAAACACAGGGTTTTAAGGAAAAAAAAAATCTCCATAATATAATAAAATGG
GGAGTAAAATATTGTTTTAAAATGTATTTTTTTTTACCATTAGGAGAAGTGGTTGGGATT
TCTCATGCTTAAGAGGCTAACAGGAAAAAAAAATGTATTAACTCTAGCTTATTTTTTTGC
TGTTGCCCATTTTTCTATGCACATAAATGAAATGTTCAGCCCTTTTCTGGTTTGTTTTAT
TAGAATGGGGTCAACTGACCCAAGAGGCCACATCCATTTTCATCCATTTAATGCATGGAT
ACAGTTTAGTTTAATTTGCTGATTTTGAAAACATCCACCTGCTGGTTTTTTTCAGGATGA
AATGTTACTATGTAACAAAGACAAGAAGTTTTAATGTGATGTTTCTGTTAAAATTTTATC
ATCATATTCACTTTAGCCAATTGAGGAAAAGAAAAAGGAGTTTTATAGTCAAAATCTGAA
ACAGATTTACTCAGTTGATTTCCACTTCAAAAATATGATGAAAATAGCTTATAAAATTAA
ACTTAACAGTAACTCCCTTTGCTGACTCAACAAACATAAAATTAGAAAGAAATAATAGGC
AATAAAGGCCTCCTAGCATTTATATTCTAATAATTCATGATCTAATGGAACTTTTATAAG
TGGCTCAAAAATGAATGAACACAAACTGCATATTTGTAAACATATTTTTCCCATTTTTCA
CTTGCTAAATTGGCTTTGCATAAATCAAGTCTTCATTGGGAAAATCCCTTGCTTCCAGAG
CAATAAAGCCTTAATTTTTTGGAATTACCCTAAACCAAGTAAAACAGATATTTTCTTTCT
TTAAAATGTCATTTCTCACCGTGTTTTTTTCTTTTTTTTTTTTTTACAGTCATAGACTAA
AAATACATTTTTGTTTTTAAAGGAGAAAGATTTAGCTTGAGGTGGCCCTTGAAAAATGCA
AATCCCAAAATGAAAAAGTTCTTTTTCTACTAGACATTGACAAAATTAAGAGACATCTCA
TCAATTAGAATAAGGCACAACTTTGTTATGTCAGTCTGTTGTTTTGTTCTTAGTTGTTAT
TTTTGTGTGCCCAGACTAACTCCCACCACCCCCAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               308-426, - strand, RNAz p=0.701858

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               308-426, - strand, RNAz p=0.701858

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               1-1167, gnl|bosTau2|chr1 (17774354-17773176)
               

               
               1-1167, gnl|Hg17|chr3 (77656614-77657823)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-1167, gnl|bosTau2|chr1 (17774354-17773176)
               

               
               1-1167, gnl|Hg17|chr3 (77656614-77657823)

	1-1167, gnl\|bosTau2\|chr1 (17774354-17773176)
	1-1167, gnl\|Hg17\|chr3 (77656614-77657823)