Ss1.1-Pig4-TMW8051D02.5
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ACGCCTACCGCAAACTCCTGGAGGGCGAGGAGGAGAGGCTGAAGCTGTCCCCTAGCCCCT
CATCGCGGATCACGATTTCGCGAGCCACTTCGAGCAGCAGCGGCAGCAGTGTGTCCATGG
CTGGGCGCTCAGGCCGCAGCAAGCTGAAGCGGCTGGAGGTGGAGGAGCCGCTGGGTACGG
GCTCGAGCGGCATCGGCTCAGGCAGCAGTACCAGCAGCAGCAGCAGCTTCCACATGGCCC
AGCAGGCCTCGGCCTCGGGCAGCATCAGCATAGAAGAGATTGACCTGGAGGGCAAGTTTG
TGCAGCTGAAGAATAGCTCGGACAAGGATCAGTCTCTGGGCAACTGGAGGATCAAGAGGC
AGGTCCTAGAAGGGGAAGAGATCGCCTACAAGTTCACGCCCAAGTACGTGCTGCGGGCTG
GCCAGACCGTCACGGTGTGGGCGGCCGGTGCAGGGGTGGCTCATAGCCCCCCATCCACGC
TCGTGTGGAAGAGCCAGAACAGCTGGGGCACTGGTGGGAGCTTCCGGACCGTCCTGGTCA
ACGCTGACGGGGAGGAAGTGGCCATAAGAACCGTGAAACAGTCCTCAGTGGCACGGGAGG
CCGAGAATGGGGAGGAGGCTGAGGACGAGGCCGCTGAGTTTGGAGAGGAGGATCTTTTCC
ATCAGCAGGGGGACCCGAGGACCACCTCTCGAGGCTGCCGCGTGATGTGAACCAAACGCG
CCTCATCACACGTCTTTCTTTACCCAGAGCCACTGAAGACTATTTTTATACCCTTAAAAA |
Blue-coloured subsequences are predicted RNA structures by RNAz
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ACGCCTACCGCAAACTCCTGGAGGGCGAGGAGGAGAGGCTGAAGCTGTCCCCTAGCCCCT
CATCGCGGATCACGATTTCGCGAGCCACTTCGAGCAGCAGCGGCAGCAGTGTGTCCATGG
CTGGGCGCTCAGGCCGCAGCAAGCTGAAGCGGCTGGAGGTGGAGGAGCCGCTGGGTACGG
GCTCGAGCGGCATCGGCTCAGGCAGCAGTACCAGCAGCAGCAGCAGCTTCCACATGGCCC
AGCAGGCCTCGGCCTCGGGCAGCATCAGCATAGAAGAGATTGACCTGGAGGGCAAGTTTG
TGCAGCTGAAGAATAGCTCGGACAAGGATCAGTCTCTGGGCAACTGGAGGATCAAGAGGC
AGGTCCTAGAAGGGGAAGAGATCGCCTACAAGTTCACGCCCAAGTACGTGCTGCGGGCTG
GCCAGACCGTCACGGTGTGGGCGGCCGGTGCAGGGGTGGCTCATAGCCCCCCATCCACGC
TCGTGTGGAAGAGCCAGAACAGCTGGGGCACTGGTGGGAGCTTCCGGACCGTCCTGGTCA
ACGCTGACGGGGAGGAAGTGGCCATAAGAACCGTGAAACAGTCCTCAGTGGCACGGGAGG
CCGAGAATGGGGAGGAGGCTGAGGACGAGGCCGCTGAGTTTGGAGAGGAGGATCTTTTCC
ATCAGCAGGGGGACCCGAGGACCACCTCTCGAGGCTGCCGCGTGATGTGAACCAAACGCG
CCTCATCACACGTCTTTCTTTACCCAGAGCCACTGAAGACTATTTTTATACCCTTAAAAA |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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36-327, gnl|bosTau2|chr7 (17930264-17930555) |
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36-327, gnl|Hg17|chr19 (2385105-2384823) |
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36-327, gnl|Mm7|chr10 (80693995-80693719) |
| |
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553-669, gnl|bosTau2|chr7 (17931540-17931656) |
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553-669, gnl|canFam2|chr20 (59803126-59803001) |
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553-669, gnl|danRer3|chr2 (11313872-11313977) |
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553-669, gnl|echTel1|scaffold_268543 (3926-3804) |
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553-669, gnl|galGal2|chr28 (587139-587252) |
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553-669, gnl|hg17|chr19 (2382545-2382667) |
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553-669, gnl|Hg17|chr19 (2382658-2382545) |
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553-669, gnl|loxAfr1|scaffold_28081 (17188-17307) |
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553-669, gnl|mm7|chr10 (80692816-80692936) |
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553-669, gnl|Mm7|chr10 (80692929-80692816) |
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553-669, gnl|monDom2|scaffold_75 (4716843-4716962) |
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553-669, gnl|panTro1|chr20 (2495878-2496000) |
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553-669, gnl|rheMac2|chr19 (2235762-2235884) |
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553-669, gnl|rn3|chr7 (10317565-10317445) |
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553-669, gnl|tetNig1|chrUn_random (49735717-49735810) |
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553-669, gnl|xenTro1|scaffold_644 (696380-696487) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
36-327, gnl|bosTau2|chr7 (17930264-17930555) |
|
36-327, gnl|Hg17|chr19 (2385105-2384823) |
|
36-327, gnl|Mm7|chr10 (80693995-80693719) |
| |
|
553-669, gnl|bosTau2|chr7 (17931540-17931656) |
|
553-669, gnl|canFam2|chr20 (59803126-59803001) |
|
553-669, gnl|danRer3|chr2 (11313872-11313977) |
|
553-669, gnl|echTel1|scaffold_268543 (3926-3804) |
|
553-669, gnl|galGal2|chr28 (587139-587252) |
|
553-669, gnl|hg17|chr19 (2382545-2382667) |
|
553-669, gnl|Hg17|chr19 (2382658-2382545) |
|
553-669, gnl|loxAfr1|scaffold_28081 (17188-17307) |
|
553-669, gnl|mm7|chr10 (80692816-80692936) |
|
553-669, gnl|Mm7|chr10 (80692929-80692816) |
|
553-669, gnl|monDom2|scaffold_75 (4716843-4716962) |
|
553-669, gnl|panTro1|chr20 (2495878-2496000) |
|
553-669, gnl|rheMac2|chr19 (2235762-2235884) |
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553-669, gnl|rn3|chr7 (10317565-10317445) |
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553-669, gnl|tetNig1|chrUn_random (49735717-49735810) |
|
553-669, gnl|xenTro1|scaffold_644 (696380-696487) |
