Ss1.1-Pig4-TMW8051J14.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAAAAGCAGCTCCCTCCGCGCGCCGCCTTTTCTGCCTCGCACTCAGGCGCGGCCGGCCCA GCCTGCGCCCCGGTCGCGGCCCTTCACTCCGCCGCGCCCTCCCACCCCGGCCTCTAAGTG CCCCGGCCGGCGACCTGCCCCCGAGTCCTCCGATGGCGCCAGCCCGATCCACGGGCTGCC TGAGCGGAGCCCTCTGCCGACAACTCCTGCTGACCCTCTCGATCTTAACATTTGCCTGTG ATGCCTGCAAAACGGTGACACTACATGTTCCCTCTAAACTGGATGCTGAAAAATTTATTG GTAGAGTTAACCTGAAGGAGTGCTTTAAATCTGCAAATCTAATTCATTCAAGCGATCCTG ATTTCCAAATTTTAGAAGATGGTTCCGTCTATACAACAAATGCTATTCTTTTGTCCTCAG AGAAGAGAACTTTTACCATATTACTTTCCAACACAGAGAACCAAGAAGAGAAGACAATAC CTGTCCTTTTAGAGCATCAAACAAAGATTCTAAAGCAAAGGCATTCTCAAGAAAAAGTTC TAAGACGTGCCAAGAGAAGATGGGCTCCTATTCCTTGTTCAGTGCCTGAGAATTCCTTGG GTCCTTTCCCACTTTTTCTTCAACAGATTCAATCTGATACGGCACAGAACTACACTATTT ACTATTCCATAAGAGGACCTGGAGTGGACAAAGAACCTCTAAATTTATTTTACGTAGAGA GAGATACTGGAAACCTGTTTTGTACTCGTCCTGTAGATCGTGAAGAATATGAATCTTTTG AGCTAGTTGCCTTTGCAACGACTCCCGATGAATATACTCCAGAATATCCACTGACCCTTG TAATCAGAATTGAGGATGAAAATGATAACTACCCAATTTTTACAGAAACAACATACACTT TTAAAGTTTCTGAAAATTGCAGAGTTGGTACTACTGTGGGACAAGTATGTGCAACTGACA AAGACGAGCCTGACACGCTGCACACGCGTCTAAGGTACTCCATCATTGAGCAGCTGCCAG CATCACCCACCCTCTTTTTTATGCATCCAACTACAGGCGTGATCACCACAACATCATCTC AGCTAGACAGAGAGCTAATGGATAAATACCAGTTAAAAATAAAAGTACAAGACATGGATG GTCAGTATTTTGGTTTGCACACAACTTCAAATTGCGTCATTAATATTGAAGATGCTAATG ACCACTTGCCAACATTCACTCGTTCTTCTTATGTGGCATCAGTAGAGGAAAATAGGATTG ACGTGGAAATCCTACGTATTGCTGTCGAAGATAAGGATTTAATTAATACTGCTAATTGGA GAGCTAATTTTACCATTTTAAAGGGCAATGAAAATGGAAATTTTAAAATTGTAACAGATC CCAAAACCAATGAAGGAATTCTGTGTGTGATTAAGCCACTGAATTATGAGGAAAAACAGC AGATGACCCTGCAAATTGGTGTAGTTAATGAAGCTCCATATGTTGGTAGTGCAAGATCAG CTATGAACACAGCGACAGTCACCGTTAATGTAGAAAATCAGGATGAAGGCCCTGAGTGCA GCCCTGCAGTGCAAACGATTCGAATTAAAGAAAATTCACCAGTGAGAACAAAGTTCAATG GATATAAAGCATATGACCCGGAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAAAAGCAGCTCCCTCCGCGCGCCGCCTTTTCTGCCTCGCACTCAGGCGCGGCCGGCCCA GCCTGCGCCCCGGTCGCGGCCCTTCACTCCGCCGCGCCCTCCCACCCCGGCCTCTAAGTG CCCCGGCCGGCGACCTGCCCCCGAGTCCTCCGATGGCGCCAGCCCGATCCACGGGCTGCC TGAGCGGAGCCCTCTGCCGACAACTCCTGCTGACCCTCTCGATCTTAACATTTGCCTGTG ATGCCTGCAAAACGGTGACACTACATGTTCCCTCTAAACTGGATGCTGAAAAATTTATTG GTAGAGTTAACCTGAAGGAGTGCTTTAAATCTGCAAATCTAATTCATTCAAGCGATCCTG ATTTCCAAATTTTAGAAGATGGTTCCGTCTATACAACAAATGCTATTCTTTTGTCCTCAG AGAAGAGAACTTTTACCATATTACTTTCCAACACAGAGAACCAAGAAGAGAAGACAATAC CTGTCCTTTTAGAGCATCAAACAAAGATTCTAAAGCAAAGGCATTCTCAAGAAAAAGTTC TAAGACGTGCCAAGAGAAGATGGGCTCCTATTCCTTGTTCAGTGCCTGAGAATTCCTTGG GTCCTTTCCCACTTTTTCTTCAACAGATTCAATCTGATACGGCACAGAACTACACTATTT ACTATTCCATAAGAGGACCTGGAGTGGACAAAGAACCTCTAAATTTATTTTACGTAGAGA GAGATACTGGAAACCTGTTTTGTACTCGTCCTGTAGATCGTGAAGAATATGAATCTTTTG AGCTAGTTGCCTTTGCAACGACTCCCGATGAATATACTCCAGAATATCCACTGACCCTTG TAATCAGAATTGAGGATGAAAATGATAACTACCCAATTTTTACAGAAACAACATACACTT TTAAAGTTTCTGAAAATTGCAGAGTTGGTACTACTGTGGGACAAGTATGTGCAACTGACA AAGACGAGCCTGACACGCTGCACACGCGTCTAAGGTACTCCATCATTGAGCAGCTGCCAG CATCACCCACCCTCTTTTTTATGCATCCAACTACAGGCGTGATCACCACAACATCATCTC AGCTAGACAGAGAGCTAATGGATAAATACCAGTTAAAAATAAAAGTACAAGACATGGATG GTCAGTATTTTGGTTTGCACACAACTTCAAATTGCGTCATTAATATTGAAGATGCTAATG ACCACTTGCCAACATTCACTCGTTCTTCTTATGTGGCATCAGTAGAGGAAAATAGGATTG ACGTGGAAATCCTACGTATTGCTGTCGAAGATAAGGATTTAATTAATACTGCTAATTGGA GAGCTAATTTTACCATTTTAAAGGGCAATGAAAATGGAAATTTTAAAATTGTAACAGATC CCAAAACCAATGAAGGAATTCTGTGTGTGATTAAGCCACTGAATTATGAGGAAAAACAGC AGATGACCCTGCAAATTGGTGTAGTTAATGAAGCTCCATATGTTGGTAGTGCAAGATCAG CTATGAACACAGCGACAGTCACCGTTAATGTAGAAAATCAGGATGAAGGCCCTGAGTGCA GCCCTGCAGTGCAAACGATTCGAATTAAAGAAAATTCACCAGTGAGAACAAAGTTCAATG GATATAAAGCATATGACCCGGAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 62 entry(ies) | More info |
| Aligned organism(s): 62 entry(ies) | Help | Less info |
| 62-221, gnl|bosTau2|chr24 (20450088-20449928) | |
| 62-221, gnl|canFam2|chr7 (61349475-61348982) | |
| 62-221, gnl|hg17|chr18 (26935690-26936266) | |
| 62-221, gnl|Hg17|chr18 (26936270-26935864) | |
| 62-221, gnl|loxAfr1|scaffold_2841 (98739-99334) | |
| 62-221, gnl|mm7|chr18 (20432414-20432869) | |
| 62-221, gnl|Mm7|chr18 (20432786-20432550) | |
| 62-221, gnl|monDom2|scaffold_4 (125307373-125306671) | |
| 62-221, gnl|panTro1|chr17 (22833333-22833910) | |
| 62-221, gnl|rheMac2|chr18 (24046987-24047564) | |
| 62-221, gnl|rn3|chr18 (11960207-11960660) | |
| 291-513, gnl|bosTau2|chr24 (20385170-20384945) | |
| 291-513, gnl|canFam2|chr7 (61404000-61403762) | |
| 291-513, gnl|dasNov1|scaffold_1820 (120752-120990) | |
| 291-513, gnl|echTel1|scaffold_262840 (7599-7840) | |
| 291-513, gnl|hg17|chr18 (26864919-26865158) | |
| 291-513, gnl|Hg17|chr18 (26865153-26864928) | |
| 291-513, gnl|loxAfr1|scaffold_122184 (251-11) | |
| 291-513, gnl|mm7|chr18 (20362860-20363099) | |
| 291-513, gnl|Mm7|chr18 (20363094-20362869) | |
| 291-513, gnl|monDom2|scaffold_4 (125411600-125411357) | |
| 291-513, gnl|oryCun1|scaffold_202858 (146284-146518) | |
| 291-513, gnl|panTro1|chr17 (22761750-22761989) | |
| 291-513, gnl|rheMac2|chr18 (23973587-23973826) | |
| 291-513, gnl|rn3|chr18 (11880867-11881106) | |
| 291-513, gnl|xenTro1|scaffold_102 (1175599-1175818) | |
| 302-506, gnl|bosTau2|chr24 (20440477-20440273) | |
| 302-506, gnl|canFam2|chr7 (61356917-61356638) | |
| 302-506, gnl|dasNov1|scaffold_838 (165391-165109) | |
| 302-506, gnl|echTel1|scaffold_262840 (7612-7886) | |
| 302-506, gnl|hg17|chr18 (26926055-26926334) | |
| 302-506, gnl|Hg17|chr18 (26926266-26926062) | |
| 302-506, gnl|loxAfr1|scaffold_2841 (89882-90160) | |
| 302-506, gnl|mm7|chr18 (20423365-20423638) | |
| 302-506, gnl|Mm7|chr18 (20423576-20423372) | |
| 302-506, gnl|monDom2|scaffold_4 (125320416-125320145) | |
| 302-506, gnl|oryCun1|scaffold_202858 (146295-146546) | |
| 302-506, gnl|panTro1|chr17 (22823780-22824059) | |
| 302-506, gnl|rheMac2|chr18 (24036998-24037277) | |
| 302-506, gnl|rn3|chr18 (11951378-11951643) | |
| 625-785, gnl|bosTau2|chr24 (20437661-20437501) | |
| 625-785, gnl|canFam2|chr7 (61359412-61359222) | |
| 625-785, gnl|danRer3|chrUn (113697296-113697460) | |
| 625-785, gnl|dasNov1|scaffold_838 (167801-167610) | |
| 625-785, gnl|echTel1|scaffold_258672 (19473-19664) | |
| 625-785, gnl|hg17|chr18 (26923373-26923564) | |
| 625-785, gnl|Hg17|chr18 (26923557-26923397) | |
| 625-785, gnl|loxAfr1|scaffold_2841 (87296-87486) | |
| 625-785, gnl|mm7|chr18 (20420404-20420595) | |
| 625-785, gnl|Mm7|chr18 (20420588-20420428) | |
| 625-785, gnl|monDom2|scaffold_4 (125326336-125326155) | |
| 625-785, gnl|oryCun1|scaffold_202858 (142461-142648) | |
| 625-785, gnl|panTro1|chr17 (22821097-22821288) | |
| 625-785, gnl|rheMac2|chr18 (24034318-24034509) | |
| 625-785, gnl|rn3|chr18 (11948737-11948928) | |
| 625-785, gnl|tetNig1|chrUn_random (127589934-127590100) | |
| 924-1118, gnl|bosTau2|chr24 (20434933-20434740) | |
| 924-1118, gnl|Hg17|chr18 (26920707-26920519) | |
| 924-1118, gnl|Mm7|chr18 (20418940-20418747) | |
| 1414-1644, gnl|bosTau2|chr24 (20427596-20427366) | |
| 1414-1644, gnl|Hg17|chr18 (26914318-26914082) | |
| 1414-1644, gnl|Mm7|chr18 (20415321-20415085) |
| Aligned organism(s): 62 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 62-221, gnl|bosTau2|chr24 (20450088-20449928) | |
| 62-221, gnl|canFam2|chr7 (61349475-61348982) | |
| 62-221, gnl|hg17|chr18 (26935690-26936266) | |
| 62-221, gnl|Hg17|chr18 (26936270-26935864) | |
| 62-221, gnl|loxAfr1|scaffold_2841 (98739-99334) | |
| 62-221, gnl|mm7|chr18 (20432414-20432869) | |
| 62-221, gnl|Mm7|chr18 (20432786-20432550) | |
| 62-221, gnl|monDom2|scaffold_4 (125307373-125306671) | |
| 62-221, gnl|panTro1|chr17 (22833333-22833910) | |
| 62-221, gnl|rheMac2|chr18 (24046987-24047564) | |
| 62-221, gnl|rn3|chr18 (11960207-11960660) | |
| 291-513, gnl|bosTau2|chr24 (20385170-20384945) | |
| 291-513, gnl|canFam2|chr7 (61404000-61403762) | |
| 291-513, gnl|dasNov1|scaffold_1820 (120752-120990) | |
| 291-513, gnl|echTel1|scaffold_262840 (7599-7840) | |
| 291-513, gnl|hg17|chr18 (26864919-26865158) | |
| 291-513, gnl|Hg17|chr18 (26865153-26864928) | |
| 291-513, gnl|loxAfr1|scaffold_122184 (251-11) | |
| 291-513, gnl|mm7|chr18 (20362860-20363099) | |
| 291-513, gnl|Mm7|chr18 (20363094-20362869) | |
| 291-513, gnl|monDom2|scaffold_4 (125411600-125411357) | |
| 291-513, gnl|oryCun1|scaffold_202858 (146284-146518) | |
| 291-513, gnl|panTro1|chr17 (22761750-22761989) | |
| 291-513, gnl|rheMac2|chr18 (23973587-23973826) | |
| 291-513, gnl|rn3|chr18 (11880867-11881106) | |
| 291-513, gnl|xenTro1|scaffold_102 (1175599-1175818) | |
| 302-506, gnl|bosTau2|chr24 (20440477-20440273) | |
| 302-506, gnl|canFam2|chr7 (61356917-61356638) | |
| 302-506, gnl|dasNov1|scaffold_838 (165391-165109) | |
| 302-506, gnl|echTel1|scaffold_262840 (7612-7886) | |
| 302-506, gnl|hg17|chr18 (26926055-26926334) | |
| 302-506, gnl|Hg17|chr18 (26926266-26926062) | |
| 302-506, gnl|loxAfr1|scaffold_2841 (89882-90160) | |
| 302-506, gnl|mm7|chr18 (20423365-20423638) | |
| 302-506, gnl|Mm7|chr18 (20423576-20423372) | |
| 302-506, gnl|monDom2|scaffold_4 (125320416-125320145) | |
| 302-506, gnl|oryCun1|scaffold_202858 (146295-146546) | |
| 302-506, gnl|panTro1|chr17 (22823780-22824059) | |
| 302-506, gnl|rheMac2|chr18 (24036998-24037277) | |
| 302-506, gnl|rn3|chr18 (11951378-11951643) | |
| 625-785, gnl|bosTau2|chr24 (20437661-20437501) | |
| 625-785, gnl|canFam2|chr7 (61359412-61359222) | |
| 625-785, gnl|danRer3|chrUn (113697296-113697460) | |
| 625-785, gnl|dasNov1|scaffold_838 (167801-167610) | |
| 625-785, gnl|echTel1|scaffold_258672 (19473-19664) | |
| 625-785, gnl|hg17|chr18 (26923373-26923564) | |
| 625-785, gnl|Hg17|chr18 (26923557-26923397) | |
| 625-785, gnl|loxAfr1|scaffold_2841 (87296-87486) | |
| 625-785, gnl|mm7|chr18 (20420404-20420595) | |
| 625-785, gnl|Mm7|chr18 (20420588-20420428) | |
| 625-785, gnl|monDom2|scaffold_4 (125326336-125326155) | |
| 625-785, gnl|oryCun1|scaffold_202858 (142461-142648) | |
| 625-785, gnl|panTro1|chr17 (22821097-22821288) | |
| 625-785, gnl|rheMac2|chr18 (24034318-24034509) | |
| 625-785, gnl|rn3|chr18 (11948737-11948928) | |
| 625-785, gnl|tetNig1|chrUn_random (127589934-127590100) | |
| 924-1118, gnl|bosTau2|chr24 (20434933-20434740) | |
| 924-1118, gnl|Hg17|chr18 (26920707-26920519) | |
| 924-1118, gnl|Mm7|chr18 (20418940-20418747) | |
| 1414-1644, gnl|bosTau2|chr24 (20427596-20427366) | |
| 1414-1644, gnl|Hg17|chr18 (26914318-26914082) | |
| 1414-1644, gnl|Mm7|chr18 (20415321-20415085) |