Ss1.1-Pig4-TMW8051K18.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCGCTCCCAGGCTAAGGCGCCCCCGTCTGCGTCCTGCACCCCTGCGCCCCCAGCGCGAGC GGTCCTTTGCAGCATGCTGTGGCGGAGCAGCCAAACGCTCCGGCGCTTCTCTACTGGCCG GGTATATTTCCAAAATAAGCTGAAGTTGGCACTTATTGGTCAGAGCCTTTTTGGACAGGA AGTCTACAGCCATCTGTGCAGAGAAGGCCACCAAGTGGTAGGAGTCTTCACAGTTCCAGA TAAGGATGGAAAAGCTGACCCACTGGCTTTGGCTGCAGAGAAAAATGGGACCCCTGTGTT CAAGTTCCCTCGATGGAGAGCCAAGGGCAAGACCATAAAGGAGGTGGCAGAGGCCTACAG GTCCGTGGGTGCTGAGCTAAACGTGCTTCCCTTCTGCACACAGTTCATCCCCATGGATAT AATTGAGAGCCCAAAGCATGGTTCCATCATTTACCACCCGTCCATCCTTCCCAGGCACAG AGGAGCCTCTGCTATCAACTGGACTCTAATCATGGGAGACAAGAAAGCTGGGTTTTCTGT TTTCTGGGCTGATGATGGTTTAGACACAGGACCCATCCTTCTTCAGAGGTCATGTGATGT CCAACCCAATGATACAGTGGATGCACTTTATAATCGATTTCTTTTTCCGGAAGGAATCAA GGCCATGGTGGAAGCAGTCCAGCTCGTAGCTGATGGAAAAGCTCCTCGTATTCCCCAGTC GGAAGAAGGGGCAACATATGAAGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCGCTCCCAGGCTAAGGCGCCCCCGTCTGCGTCCTGCACCCCTGCGCCCCCAGCGCGAGC GGTCCTTTGCAGCATGCTGTGGCGGAGCAGCCAAACGCTCCGGCGCTTCTCTACTGGCCG GGTATATTTCCAAAATAAGCTGAAGTTGGCACTTATTGGTCAGAGCCTTTTTGGACAGGA AGTCTACAGCCATCTGTGCAGAGAAGGCCACCAAGTGGTAGGAGTCTTCACAGTTCCAGA TAAGGATGGAAAAGCTGACCCACTGGCTTTGGCTGCAGAGAAAAATGGGACCCCTGTGTT CAAGTTCCCTCGATGGAGAGCCAAGGGCAAGACCATAAAGGAGGTGGCAGAGGCCTACAG GTCCGTGGGTGCTGAGCTAAACGTGCTTCCCTTCTGCACACAGTTCATCCCCATGGATAT AATTGAGAGCCCAAAGCATGGTTCCATCATTTACCACCCGTCCATCCTTCCCAGGCACAG AGGAGCCTCTGCTATCAACTGGACTCTAATCATGGGAGACAAGAAAGCTGGGTTTTCTGT TTTCTGGGCTGATGATGGTTTAGACACAGGACCCATCCTTCTTCAGAGGTCATGTGATGT CCAACCCAATGATACAGTGGATGCACTTTATAATCGATTTCTTTTTCCGGAAGGAATCAA GGCCATGGTGGAAGCAGTCCAGCTCGTAGCTGATGGAAAAGCTCCTCGTATTCCCCAGTC GGAAGAAGGGGCAACATATGAAGG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 306-465, - strand, RNAz p=0.985957 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 306-465, - strand, RNAz p=0.985957 |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 121-264, gnl|bosTau2|chr2 (80604945-80604802) | |
| 121-264, gnl|canFam2|chr10 (36445439-36445301) | |
| 121-264, gnl|danRer3|chr2 (44982929-44982796) | |
| 121-264, gnl|dasNov1|scaffold_33413 (6730-6868) | |
| 121-264, gnl|echTel1|scaffold_318623 (37196-37334) | |
| 121-264, gnl|fr1|chrUn (245630873-245630739) | |
| 121-264, gnl|galGal2|chr1 (51007862-51007724) | |
| 121-264, gnl|hg17|chr12 (103970097-103970235) | |
| 121-264, gnl|Hg17|chr12 (103970251-103970108) | |
| 121-264, gnl|loxAfr1|scaffold_31366 (14459-14597) | |
| 121-264, gnl|mm7|chr10 (83068805-83068943) | |
| 121-264, gnl|Mm7|chr10 (83068959-83068816) | |
| 121-264, gnl|monDom2|scaffold_34 (8176810-8176672) | |
| 121-264, gnl|oryCun1|scaffold_172451 (58567-58705) | |
| 121-264, gnl|panTro1|chr10 (106474292-106474430) | |
| 121-264, gnl|rheMac2|chr11 (106195224-106195362) | |
| 121-264, gnl|rn3|chr7 (22427485-22427347) | |
| 121-264, gnl|tetNig1|chrUn_random (48666459-48666321) | |
| 121-264, gnl|xenTro1|scaffold_434 (756881-757019) | |
| 266-502, gnl|bosTau2|chr2 (80603602-80603366) | |
| 266-502, gnl|canFam2|chr10 (36448137-36447873) | |
| 266-502, gnl|danRer3|chrNA (55305923-55306178) | |
| 266-502, gnl|dasNov1|scaffold_33413 (4160-4424) | |
| 266-502, gnl|echTel1|scaffold_258518 (5720-5449) | |
| 266-502, gnl|fr1|chrUn (245631552-245631290) | |
| 266-502, gnl|galGal2|chr1 (51010247-51009984) | |
| 266-502, gnl|hg17|chr12 (27979725-27979976) | |
| 266-502, gnl|Hg17|chr12 (103967050-103966814) | |
| 266-502, gnl|loxAfr1|scaffold_31366 (7083-7349) | |
| 266-502, gnl|Mm7|chr10 (83064446-83064210) | |
| 266-502, gnl|mm7|chr6 (147313717-147313940) | |
| 266-502, gnl|monDom2|scaffold_34 (8183629-8183363) | |
| 266-502, gnl|oryCun1|scaffold_201360 (345804-345557) | |
| 266-502, gnl|panTro1|chrUn_random (54412699-54412950) | |
| 266-502, gnl|rheMac2|chr11 (106191722-106191980) | |
| 266-502, gnl|rn3|chr4 (185115734-185115937) | |
| 266-502, gnl|tetNig1|chrUn_random (48667417-48667175) | |
| 266-502, gnl|xenTro1|scaffold_434 (754933-755188) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 121-264, gnl|bosTau2|chr2 (80604945-80604802) | |
| 121-264, gnl|canFam2|chr10 (36445439-36445301) | |
| 121-264, gnl|danRer3|chr2 (44982929-44982796) | |
| 121-264, gnl|dasNov1|scaffold_33413 (6730-6868) | |
| 121-264, gnl|echTel1|scaffold_318623 (37196-37334) | |
| 121-264, gnl|fr1|chrUn (245630873-245630739) | |
| 121-264, gnl|galGal2|chr1 (51007862-51007724) | |
| 121-264, gnl|hg17|chr12 (103970097-103970235) | |
| 121-264, gnl|Hg17|chr12 (103970251-103970108) | |
| 121-264, gnl|loxAfr1|scaffold_31366 (14459-14597) | |
| 121-264, gnl|mm7|chr10 (83068805-83068943) | |
| 121-264, gnl|Mm7|chr10 (83068959-83068816) | |
| 121-264, gnl|monDom2|scaffold_34 (8176810-8176672) | |
| 121-264, gnl|oryCun1|scaffold_172451 (58567-58705) | |
| 121-264, gnl|panTro1|chr10 (106474292-106474430) | |
| 121-264, gnl|rheMac2|chr11 (106195224-106195362) | |
| 121-264, gnl|rn3|chr7 (22427485-22427347) | |
| 121-264, gnl|tetNig1|chrUn_random (48666459-48666321) | |
| 121-264, gnl|xenTro1|scaffold_434 (756881-757019) | |
| 266-502, gnl|bosTau2|chr2 (80603602-80603366) | |
| 266-502, gnl|canFam2|chr10 (36448137-36447873) | |
| 266-502, gnl|danRer3|chrNA (55305923-55306178) | |
| 266-502, gnl|dasNov1|scaffold_33413 (4160-4424) | |
| 266-502, gnl|echTel1|scaffold_258518 (5720-5449) | |
| 266-502, gnl|fr1|chrUn (245631552-245631290) | |
| 266-502, gnl|galGal2|chr1 (51010247-51009984) | |
| 266-502, gnl|hg17|chr12 (27979725-27979976) | |
| 266-502, gnl|Hg17|chr12 (103967050-103966814) | |
| 266-502, gnl|loxAfr1|scaffold_31366 (7083-7349) | |
| 266-502, gnl|Mm7|chr10 (83064446-83064210) | |
| 266-502, gnl|mm7|chr6 (147313717-147313940) | |
| 266-502, gnl|monDom2|scaffold_34 (8183629-8183363) | |
| 266-502, gnl|oryCun1|scaffold_201360 (345804-345557) | |
| 266-502, gnl|panTro1|chrUn_random (54412699-54412950) | |
| 266-502, gnl|rheMac2|chr11 (106191722-106191980) | |
| 266-502, gnl|rn3|chr4 (185115734-185115937) | |
| 266-502, gnl|tetNig1|chrUn_random (48667417-48667175) | |
| 266-502, gnl|xenTro1|scaffold_434 (754933-755188) |