Non-Coding RNA Search

Ss1.1-Pig4-TMW8052D16.5

Sequence:


               
               CAGCAGCAACCCAGGTCCATGCAGTCACAATGGTGGTTCCTTAACCCACTGTGCCACAAG
GGAACTCTATGTACTCTCCTTTTTGATGGTCACTTGAACAGATCCTAGTTTTTGACTACT
ACGAAAAAAATGACACACTCAACACCCTTCTGTACCTCCAATTATCTATGTGCGAAGTTT
CTCTAGGAACTATATCCAGGAATAAAATTATTGGAGAATATGTTCATCTTCAATTTCCTA
GATATTGCCAATGATTTCCAAAACAGCTGTATATATTTACATTCCATGCAGCAATAGACA
AGGTTCTCACTGCTTTACAGTCTCACTGTTTACATCTGTGGCCTATTTTAGGGGTATGTC
ATGCAACTCATTATAGTTTTAATGTGAATTTCCTTGATTACTAATGACGTTGGGCGTATT
TTCATGGGTTTATTGGCCCTATTTCTTTTTTTGTGAGTTTCTATTCTAGTCTTTACCTCC
TATTCTATAGGGTTGTCTCTCTTCTACTTATTGCTTCTAAGAGTTTTTAATATATTTTCA
GTAATGGTTCCTAGTCAGATTCATTTCCTCTGGGCTACAACAGGAATTCCCTAGTCAGAC
TCTTAAGCCCCCGCCAGCACAGTTTTGTTTGGTAGCTTGGTGGTGATTCATTATTGTGTG
CACTCAAGTTTGAGAACCACTGTCAGTAACCTTCATGGCCAAAGTATCAGCACTTAGCCT
ATTAGGCCTGAATTTAAATCTACAATTGCTTTCTTGTACAATTACCTGGATATTTCTTCC
TTTGTGGAAACACATACTGTGTCCATTCTCCCCATTATTGACCTTAAGTATGCTGCTTGT
CTGAATATTTGTTAACCATTTAAATAATGAATATTTCCCCAAAAAAAGATTCCACCACAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGCAGCAACCCAGGTCCATGCAGTCACAATGGTGGTTCCTTAACCCACTGTGCCACAAG
GGAACTCTATGTACTCTCCTTTTTGATGGTCACTTGAACAGATCCTAGTTTTTGACTACT
ACGAAAAAAATGACACACTCAACACCCTTCTGTACCTCCAATTATCTATGTGCGAAGTTT
CTCTAGGAACTATATCCAGGAATAAAATTATTGGAGAATATGTTCATCTTCAATTTCCTA
GATATTGCCAATGATTTCCAAAACAGCTGTATATATTTACATTCCATGCAGCAATAGACA
AGGTTCTCACTGCTTTACAGTCTCACTGTTTACATCTGTGGCCTATTTTAGGGGTATGTC
ATGCAACTCATTATAGTTTTAATGTGAATTTCCTTGATTACTAATGACGTTGGGCGTATT
TTCATGGGTTTATTGGCCCTATTTCTTTTTTTGTGAGTTTCTATTCTAGTCTTTACCTCC
TATTCTATAGGGTTGTCTCTCTTCTACTTATTGCTTCTAAGAGTTTTTAATATATTTTCA
GTAATGGTTCCTAGTCAGATTCATTTCCTCTGGGCTACAACAGGAATTCCCTAGTCAGAC
TCTTAAGCCCCCGCCAGCACAGTTTTGTTTGGTAGCTTGGTGGTGATTCATTATTGTGTG
CACTCAAGTTTGAGAACCACTGTCAGTAACCTTCATGGCCAAAGTATCAGCACTTAGCCT
ATTAGGCCTGAATTTAAATCTACAATTGCTTTCTTGTACAATTACCTGGATATTTCTTCC
TTTGTGGAAACACATACTGTGTCCATTCTCCCCATTATTGACCTTAAGTATGCTGCTTGT
CTGAATATTTGTTAACCATTTAAATAATGAATATTTCCCCAAAAAAAGATTCCACCACAC

Aligned organism(s): 8 entry(ies)

More info

Aligned organism(s): 8 entry(ies)

Help | Less info


               
               48-481, gnl|bosTau2|chr9 (43919194-43919630)
               

               
               48-481, gnl|hg17|chr6 (136540310-136540857)
               

               
               48-481, gnl|Hg17|chr6 (136540741-136540309)
               

               
               48-481, gnl|oryCun1|scaffold_199700 (88351-87838)
               

               
               48-481, gnl|panTro1|chr5 (139346542-139347089)
               

               
               48-481, gnl|rheMac2|chr4 (127663298-127662748)
               


               
               633-876, gnl|bosTau2|chr9 (43921460-43921700)
               

               
               633-876, gnl|Hg17|chr6 (136534238-136533975)

Aligned organism(s): 8 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               48-481, gnl|bosTau2|chr9 (43919194-43919630)
               

               
               48-481, gnl|hg17|chr6 (136540310-136540857)
               

               
               48-481, gnl|Hg17|chr6 (136540741-136540309)
               

               
               48-481, gnl|oryCun1|scaffold_199700 (88351-87838)
               

               
               48-481, gnl|panTro1|chr5 (139346542-139347089)
               

               
               48-481, gnl|rheMac2|chr4 (127663298-127662748)
               


               
               633-876, gnl|bosTau2|chr9 (43921460-43921700)
               

               
               633-876, gnl|Hg17|chr6 (136534238-136533975)

	48-481, gnl\|bosTau2\|chr9 (43919194-43919630)
	48-481, gnl\|hg17\|chr6 (136540310-136540857)
	48-481, gnl\|Hg17\|chr6 (136540741-136540309)
	48-481, gnl\|oryCun1\|scaffold_199700 (88351-87838)
	48-481, gnl\|panTro1\|chr5 (139346542-139347089)
	48-481, gnl\|rheMac2\|chr4 (127663298-127662748)

	633-876, gnl\|bosTau2\|chr9 (43921460-43921700)
	633-876, gnl\|Hg17\|chr6 (136534238-136533975)