Ss1.1-Pig4-TMW8053C03.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCGCAGCGAGGCTAGGAACCGACCTTGAGCTCGTCCCGCGTGGGGAGAGCAGAGCTCAGG GGGGGTGCCAGAGCCGGAGACTGGGATAGCGAACTCAGGGCTGAGTGAGCGGAAGAGAGC CCGGCCTGAGGTCCAGGTGGTGCCGGAATTCCTCTTTGTCCAGCTCAGGACTCCTGCTCT TTGTTGGCTGCTGCTTTTAACTAGAAATGCTGTCACACAAGTAAAGACATGGCCACTTAC GGCCCAACAGGACACATGCAACTGCCCCGAGCTGATGCCATTCGTTCCCGTCTGATTGAT ACTTTCTCTCTCATCGAGCACCTGCAAGGCTTGAGCCAAGCTGTGCCACGGCACACCATC CGAGAGATACTTGAATTGCTTGAATCCTCAAATGCCCAACTGTGGCCACTGAAGCTGACT CTGGAGGTGGCAGCTTGGTTCATCTTGCTTGTTTTCATCTTGGAGATCCTTCTTATGTGG ATATCCAGCTTTTTCCTCTTCTGGAAGAATGCCTGGAATGTCTTTGACTTTGTTGTGACC ATATTGTCCCTGATTCCTGAAACTGTGGTTCTGGTAGGGGTAACAAGCCATTCTGTCTGG CTCCAGTTGCTGAGGATCTGCCGGGTGCTAAGGTCTCTGAAACTTTTTGCACGATTCCCT CAAATTCGAGTCATTATTTTGGCCCTGGTCAGGGCCCTCAAGGGACCTGCTGAACTCCCT AGTGACGGTGTTCATACTTTTCACCATGGATCATTGGTATGCACTGCTTCAAGATACCTG GAAGGTGCCTGAAGTTAGCCGCGCCTTCAGCAGCATCTACGTCATTCTCTGGTTGTTACT TGGTTCCATTATCTTTCGAAATATCATAGTAGCCATGATGGGAGACAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCGCAGCGAGGCTAGGAACCGACCTTGAGCTCGTCCCGCGTGGGGAGAGCAGAGCTCAGG GGGGGTGCCAGAGCCGGAGACTGGGATAGCGAACTCAGGGCTGAGTGAGCGGAAGAGAGC CCGGCCTGAGGTCCAGGTGGTGCCGGAATTCCTCTTTGTCCAGCTCAGGACTCCTGCTCT TTGTTGGCTGCTGCTTTTAACTAGAAATGCTGTCACACAAGTAAAGACATGGCCACTTAC GGCCCAACAGGACACATGCAACTGCCCCGAGCTGATGCCATTCGTTCCCGTCTGATTGAT ACTTTCTCTCTCATCGAGCACCTGCAAGGCTTGAGCCAAGCTGTGCCACGGCACACCATC CGAGAGATACTTGAATTGCTTGAATCCTCAAATGCCCAACTGTGGCCACTGAAGCTGACT CTGGAGGTGGCAGCTTGGTTCATCTTGCTTGTTTTCATCTTGGAGATCCTTCTTATGTGG ATATCCAGCTTTTTCCTCTTCTGGAAGAATGCCTGGAATGTCTTTGACTTTGTTGTGACC ATATTGTCCCTGATTCCTGAAACTGTGGTTCTGGTAGGGGTAACAAGCCATTCTGTCTGG CTCCAGTTGCTGAGGATCTGCCGGGTGCTAAGGTCTCTGAAACTTTTTGCACGATTCCCT CAAATTCGAGTCATTATTTTGGCCCTGGTCAGGGCCCTCAAGGGACCTGCTGAACTCCCT AGTGACGGTGTTCATACTTTTCACCATGGATCATTGGTATGCACTGCTTCAAGATACCTG GAAGGTGCCTGAAGTTAGCCGCGCCTTCAGCAGCATCTACGTCATTCTCTGGTTGTTACT TGGTTCCATTATCTTTCGAAATATCATAGTAGCCATGATGGGAGACAA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 13-130, + strand, RNAz p=0.849386 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 13-130, + strand, RNAz p=0.849386 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 3' of BC066967, + |
| Aligned organism(s): 56 entry(ies) | More info |
| Aligned organism(s): 56 entry(ies) | Help | Less info |
| 1-130, gnl|bosTau2|chr21 (34477069-34476942) | |
| 1-130, gnl|canFam2|chr30 (13479742-13479907) | |
| 1-130, gnl|canFam2|chr30 (13479935-13479776) | |
| 1-130, gnl|dasNov1|scaffold_107453 (1271-1102) | |
| 1-130, gnl|dasNov1|scaffold_4692 (41707-41864) | |
| 1-130, gnl|echTel1|scaffold_282561 (126795-126626) | |
| 1-130, gnl|hg17|chr15 (41728077-41728251) | |
| 1-130, gnl|Hg17|chr15 (41825663-41825538) | |
| 1-130, gnl|hg17|chr5 (118374893-118375058) | |
| 1-130, gnl|mm7|chr2 (121154416-121154586) | |
| 1-130, gnl|mm7|chr2 (121154620-121154471) | |
| 1-130, gnl|Mm7|chr2 (121154575-121154457) | |
| 1-130, gnl|monDom2|scaffold_53 (10318552-10318377) | |
| 1-130, gnl|panTro1|chr16_random (12339951-12340125) | |
| 1-130, gnl|panTro1|chr4 (124595888-124596053) | |
| 1-130, gnl|rheMac2|chr7 (22091101-22091277) | |
| 1-130, gnl|rheMac2|chr7 (22091311-22091146) | |
| 1-130, gnl|rn3|chr3 (108116772-108116960) | |
| 1-130, gnl|rn3|chr3 (108116993-108116831) | |
| 373-546, gnl|bosTau2|chr21 (34468195-34468022) | |
| 373-546, gnl|canFam2|chr30 (13472000-13472301) | |
| 373-546, gnl|canFam2|chr30 (13472326-13472155) | |
| 373-546, gnl|dasNov1|scaffold_51531 (8077-8418) | |
| 373-546, gnl|dasNov1|scaffold_51531 (8443-8271) | |
| 373-546, gnl|echTel1|scaffold_302040 (6987-7316) | |
| 373-546, gnl|echTel1|scaffold_302040 (7341-7169) | |
| 373-546, gnl|hg17|chr15 (41719644-41719962) | |
| 373-546, gnl|Hg17|chr15 (41719987-41719814) | |
| 373-546, gnl|hg17|chr5 (118375450-118375623) | |
| 373-546, gnl|loxAfr1|scaffold_21757 (16882-16553) | |
| 373-546, gnl|loxAfr1|scaffold_21757 (16553-16700) | |
| 373-546, gnl|mm7|chr2 (121148032-121148340) | |
| 373-546, gnl|mm7|chr2 (121148365-121148193) | |
| 373-546, gnl|Mm7|chr2 (121148365-121148192) | |
| 373-546, gnl|monDom2|scaffold_53 (10326432-10326114) | |
| 373-546, gnl|oryCun1|scaffold_181977 (9912-10206) | |
| 373-546, gnl|oryCun1|scaffold_181977 (10231-10059) | |
| 373-546, gnl|panTro1|chr16_random (12331504-12331827) | |
| 373-546, gnl|panTro1|chr4 (124596445-124596618) | |
| 373-546, gnl|rheMac2|chr7 (22082567-22082889) | |
| 373-546, gnl|rheMac2|chr7 (22082914-22082742) | |
| 373-546, gnl|rn3|chr3 (108110917-108111223) | |
| 373-546, gnl|rn3|chr3 (108111248-108111076) | |
| 701-882, gnl|bosTau2|chr21 (34465598-34465417) | |
| 701-882, gnl|canFam2|chr30 (13469663-13469927) | |
| 701-882, gnl|dasNov1|scaffold_51531 (5727-6000) | |
| 701-882, gnl|echTel1|scaffold_302040 (4131-4401) | |
| 701-882, gnl|hg17|chr15 (41715509-41715771) | |
| 701-882, gnl|Hg17|chr15 (41715711-41715530) | |
| 701-882, gnl|mm7|chr2 (121140869-121141120) | |
| 701-882, gnl|Mm7|chr2 (121141073-121140892) | |
| 701-882, gnl|monDom2|scaffold_53 (10329018-10328733) | |
| 701-882, gnl|oryCun1|scaffold_181977 (6951-7213) | |
| 701-882, gnl|panTro1|chr16_random (12327365-12327627) | |
| 701-882, gnl|rheMac2|chr7 (22078173-22078435) | |
| 701-882, gnl|rn3|chr3 (108103391-108103636) |
| Aligned organism(s): 56 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-130, gnl|bosTau2|chr21 (34477069-34476942) | |
| 1-130, gnl|canFam2|chr30 (13479742-13479907) | |
| 1-130, gnl|canFam2|chr30 (13479935-13479776) | |
| 1-130, gnl|dasNov1|scaffold_107453 (1271-1102) | |
| 1-130, gnl|dasNov1|scaffold_4692 (41707-41864) | |
| 1-130, gnl|echTel1|scaffold_282561 (126795-126626) | |
| 1-130, gnl|hg17|chr15 (41728077-41728251) | |
| 1-130, gnl|Hg17|chr15 (41825663-41825538) | |
| 1-130, gnl|hg17|chr5 (118374893-118375058) | |
| 1-130, gnl|mm7|chr2 (121154416-121154586) | |
| 1-130, gnl|mm7|chr2 (121154620-121154471) | |
| 1-130, gnl|Mm7|chr2 (121154575-121154457) | |
| 1-130, gnl|monDom2|scaffold_53 (10318552-10318377) | |
| 1-130, gnl|panTro1|chr16_random (12339951-12340125) | |
| 1-130, gnl|panTro1|chr4 (124595888-124596053) | |
| 1-130, gnl|rheMac2|chr7 (22091101-22091277) | |
| 1-130, gnl|rheMac2|chr7 (22091311-22091146) | |
| 1-130, gnl|rn3|chr3 (108116772-108116960) | |
| 1-130, gnl|rn3|chr3 (108116993-108116831) | |
| 373-546, gnl|bosTau2|chr21 (34468195-34468022) | |
| 373-546, gnl|canFam2|chr30 (13472000-13472301) | |
| 373-546, gnl|canFam2|chr30 (13472326-13472155) | |
| 373-546, gnl|dasNov1|scaffold_51531 (8077-8418) | |
| 373-546, gnl|dasNov1|scaffold_51531 (8443-8271) | |
| 373-546, gnl|echTel1|scaffold_302040 (6987-7316) | |
| 373-546, gnl|echTel1|scaffold_302040 (7341-7169) | |
| 373-546, gnl|hg17|chr15 (41719644-41719962) | |
| 373-546, gnl|Hg17|chr15 (41719987-41719814) | |
| 373-546, gnl|hg17|chr5 (118375450-118375623) | |
| 373-546, gnl|loxAfr1|scaffold_21757 (16882-16553) | |
| 373-546, gnl|loxAfr1|scaffold_21757 (16553-16700) | |
| 373-546, gnl|mm7|chr2 (121148032-121148340) | |
| 373-546, gnl|mm7|chr2 (121148365-121148193) | |
| 373-546, gnl|Mm7|chr2 (121148365-121148192) | |
| 373-546, gnl|monDom2|scaffold_53 (10326432-10326114) | |
| 373-546, gnl|oryCun1|scaffold_181977 (9912-10206) | |
| 373-546, gnl|oryCun1|scaffold_181977 (10231-10059) | |
| 373-546, gnl|panTro1|chr16_random (12331504-12331827) | |
| 373-546, gnl|panTro1|chr4 (124596445-124596618) | |
| 373-546, gnl|rheMac2|chr7 (22082567-22082889) | |
| 373-546, gnl|rheMac2|chr7 (22082914-22082742) | |
| 373-546, gnl|rn3|chr3 (108110917-108111223) | |
| 373-546, gnl|rn3|chr3 (108111248-108111076) | |
| 701-882, gnl|bosTau2|chr21 (34465598-34465417) | |
| 701-882, gnl|canFam2|chr30 (13469663-13469927) | |
| 701-882, gnl|dasNov1|scaffold_51531 (5727-6000) | |
| 701-882, gnl|echTel1|scaffold_302040 (4131-4401) | |
| 701-882, gnl|hg17|chr15 (41715509-41715771) | |
| 701-882, gnl|Hg17|chr15 (41715711-41715530) | |
| 701-882, gnl|mm7|chr2 (121140869-121141120) | |
| 701-882, gnl|Mm7|chr2 (121141073-121140892) | |
| 701-882, gnl|monDom2|scaffold_53 (10329018-10328733) | |
| 701-882, gnl|oryCun1|scaffold_181977 (6951-7213) | |
| 701-882, gnl|panTro1|chr16_random (12327365-12327627) | |
| 701-882, gnl|rheMac2|chr7 (22078173-22078435) | |
| 701-882, gnl|rn3|chr3 (108103391-108103636) |