Non-Coding RNA Search

Ss1.1-Pig4-TMW8053D23.5

Sequence:


               
               GAGTTTTCAGAGGTACATAAAATAAATGAAAATGGAAATTAGACTAAGATCTGAACTGGA
TTGCAGAGGTTGAATTTAACACTAAAGCTTAGCCTCCCAAGAATTTTGGTGGTTAGGCTT
TTGACATATTTTTCTTTTCAGCTGTCATCATGACTCCAACTCGAGAACTGGCTTTGCAAA
TTACTAAAGAATGTAAGAAATTTTCGAAGACCTTGGGCCTTAGAGTGGTCTGTGTTTATG
GAGGAACAGGAATCAGTGAGCAGATTGCTGAGCTGAAAAGAGGTGCTGAAATTATTGTTT
GCACACCTGGTCGAATGATTGACATGTTAGCAGCTAACAGTGGTAAGTCAGGAGTGGGTT
TTTTTTGGTTTTCTTTTCTCTTTTTTTGAATTCTATACATTTTTGTTAAAGCAGATACAA
GAAACCACCAAAAGGTTTCTACATTTCTTCTTAAAGTTGTAATATCTTAAAATTTGTATT
GTAACAAGCTTATTGTTGCAAGTGGTCACAATATTTTTGCAATTTAATGTAAACTTTCTT
TTGAGAACCATACCATCTGATTTTTTTTTTTAGCATTTAATATGGATTCTTAATCCAATT
TTGGCTTAGCTTTGTTTTTAAGAGGGTGTGGGTCTTTTTTTTTTAATTGTACAATTTAGA
CTTTTTTTCTTCTTAGGAGCTAGGGTCTTCTTACAATACTAGATAAATTAAGATATTGCA
GCTTTAAGAAATTTTATCTTTTGTAAATATTGCATGTTTTAGCTCAAATATTGTGCTTTG
TTAAATTATTCCCTATCAAAACTGTTACTAAACTGTTGACATTATTTAACTTCTGTGGAG
AAAGGCCCTTCAAGATTTATAGAACTGGGCTTCCGAGACTTAAACCATCAAAGGTAGGTA
ATTTAATGCTGTTCCCAATCTTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGTTTTCAGAGGTACATAAAATAAATGAAAATGGAAATTAGACTAAGATCTGAACTGGA
TTGCAGAGGTTGAATTTAACACTAAAGCTTAGCCTCCCAAGAATTTTGGTGGTTAGGCTT
TTGACATATTTTTCTTTTCAGCTGTCATCATGACTCCAACTCGAGAACTGGCTTTGCAAA
TTACTAAAGAATGTAAGAAATTTTCGAAGACCTTGGGCCTTAGAGTGGTCTGTGTTTATG
GAGGAACAGGAATCAGTGAGCAGATTGCTGAGCTGAAAAGAGGTGCTGAAATTATTGTTT
GCACACCTGGTCGAATGATTGACATGTTAGCAGCTAACAGTGGTAAGTCAGGAGTGGGTT
TTTTTTGGTTTTCTTTTCTCTTTTTTTGAATTCTATACATTTTTGTTAAAGCAGATACAA
GAAACCACCAAAAGGTTTCTACATTTCTTCTTAAAGTTGTAATATCTTAAAATTTGTATT
GTAACAAGCTTATTGTTGCAAGTGGTCACAATATTTTTGCAATTTAATGTAAACTTTCTT
TTGAGAACCATACCATCTGATTTTTTTTTTTAGCATTTAATATGGATTCTTAATCCAATT
TTGGCTTAGCTTTGTTTTTAAGAGGGTGTGGGTCTTTTTTTTTTAATTGTACAATTTAGA
CTTTTTTTCTTCTTAGGAGCTAGGGTCTTCTTACAATACTAGATAAATTAAGATATTGCA
GCTTTAAGAAATTTTATCTTTTGTAAATATTGCATGTTTTAGCTCAAATATTGTGCTTTG
TTAAATTATTCCCTATCAAAACTGTTACTAAACTGTTGACATTATTTAACTTCTGTGGAG
AAAGGCCCTTCAAGATTTATAGAACTGGGCTTCCGAGACTTAAACCATCAAAGGTAGGTA
ATTTAATGCTGTTCCCAATCTTGC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|15281142|gb|AAK91866.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|15281142|gb|AAK91866.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               4-263, gnl|bosTau2|chr7 (32369801-32369542)
               

               
               4-263, gnl|Hg17|chr5 (134148921-134149175)
               

               
               4-263, gnl|Mm7|chr13 (54742793-54743041)
               


               
               361-924, gnl|bosTau2|chr7 (32337215-32336638)
               

               
               361-924, gnl|Hg17|chr5 (134152195-134152884)
               

               
               361-924, gnl|Mm7|chr13 (54747045-54747537)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-263, gnl|bosTau2|chr7 (32369801-32369542)
               

               
               4-263, gnl|Hg17|chr5 (134148921-134149175)
               

               
               4-263, gnl|Mm7|chr13 (54742793-54743041)
               


               
               361-924, gnl|bosTau2|chr7 (32337215-32336638)
               

               
               361-924, gnl|Hg17|chr5 (134152195-134152884)
               

               
               361-924, gnl|Mm7|chr13 (54747045-54747537)

	4-263, gnl\|bosTau2\|chr7 (32369801-32369542)
	4-263, gnl\|Hg17\|chr5 (134148921-134149175)
	4-263, gnl\|Mm7\|chr13 (54742793-54743041)

	361-924, gnl\|bosTau2\|chr7 (32337215-32336638)
	361-924, gnl\|Hg17\|chr5 (134152195-134152884)
	361-924, gnl\|Mm7\|chr13 (54747045-54747537)