Non-Coding RNA Search

Ss1.1-Pig4-TMW8053L18.5

Sequence:


               
               GACATTTACCCCTGCCGCACTTCAATGTGTTTGTTCTAGTTGTTTTGAAAGTTACTACCA
AACTATTAAATAGGGACTCTTAAATTTTTTTTTTTTTTTTTTTTTTTTTTCACTCCAGTG
TTCAATACTAAGCCACGAAATGTTTCTCTAAATCTTGGCATGATACGTTTCTAGGATACA
GAGCAAACAACTTTAACTCAAAGCAAAGGAGTGCTGAATAGCCTTTTTTCCTTTTAACAG
AATCATTACAGAAATAGGACCATAAACCTTCTATTAAGCACTTTTATATGAAATGTGAGG
TTTCTGTCAAATTAGACATGGAAAATTAAACAAAGCTGCACAAATTACTGATCTGTGCAA
TTTTTGAGCTCTCCCCTATGTTAGGCTTTCCCTCCCTTTCCTTTGGATGATTGTTTCTCT
TAAACACTAGTACAGGAATGTTATGATTTATACAAAATTGTTTTTGGTTTCATGTTGGTA
GTTTTTCACCCCCCTATAGCATTTAATCATTCTTTTTTCTTTTGAAAATCTATTTTTCTT
CCTAAAATGCATTCTTGTTTATTTTGATTTTTGTGAAGCAAATACCTTTTGGGTAATTGA
ACACCTTCATTTAGTACTTCCTTAATTCATTTGGCAATGTGCATAAAATAGTGTTGATTT
TTCTCATGCTTCCTAATTCAGATCATCATCTTAAAAGCCTTCTTTTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACATTTACCCCTGCCGCACTTCAATGTGTTTGTTCTAGTTGTTTTGAAAGTTACTACCA
AACTATTAAATAGGGACTCTTAAATTTTTTTTTTTTTTTTTTTTTTTTTTCACTCCAGTG
TTCAATACTAAGCCACGAAATGTTTCTCTAAATCTTGGCATGATACGTTTCTAGGATACA
GAGCAAACAACTTTAACTCAAAGCAAAGGAGTGCTGAATAGCCTTTTTTCCTTTTAACAG
AATCATTACAGAAATAGGACCATAAACCTTCTATTAAGCACTTTTATATGAAATGTGAGG
TTTCTGTCAAATTAGACATGGAAAATTAAACAAAGCTGCACAAATTACTGATCTGTGCAA
TTTTTGAGCTCTCCCCTATGTTAGGCTTTCCCTCCCTTTCCTTTGGATGATTGTTTCTCT
TAAACACTAGTACAGGAATGTTATGATTTATACAAAATTGTTTTTGGTTTCATGTTGGTA
GTTTTTCACCCCCCTATAGCATTTAATCATTCTTTTTTCTTTTGAAAATCTATTTTTCTT
CCTAAAATGCATTCTTGTTTATTTTGATTTTTGTGAAGCAAATACCTTTTGGGTAATTGA
ACACCTTCATTTAGTACTTCCTTAATTCATTTGGCAATGTGCATAAAATAGTGTTGATTT
TTCTCATGCTTCCTAATTCAGATCATCATCTTAAAAGCCTTCTTTTGA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               275-392, - strand, RNAz p=0.527305

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               275-392, - strand, RNAz p=0.527305

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               23-518, gnl|bosTau2|chr21 (9500492-9500977)
               

               
               23-518, gnl|Hg17|chr15 (83740771-83741269)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               23-518, gnl|bosTau2|chr21 (9500492-9500977)
               

               
               23-518, gnl|Hg17|chr15 (83740771-83741269)

	23-518, gnl\|bosTau2\|chr21 (9500492-9500977)
	23-518, gnl\|Hg17\|chr15 (83740771-83741269)