Ss1.1-Pig4-TMW8053N24.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTCCAGGCCAGCACCCTGCAGCGCTCCACCTCCTTCCGCCAGGGCCCTGAGGAGAGCAGC CTGGGGGACAGCACAGGCCCCAAACTAAGCGCACTGGAGTGCTTGGAGGGCATGGCGTCT GGCCTCTACAGCGAGCTCTTCACGCTTCTCATTTCCCTGGTGAACAGGGCTCTCAAGTCT AGCCAGCACTCGCTCTGCTCTATGATGATCGTGGACACTCCCGGCTTCCAGAACCCTGAG CAGGGTGGGTCAGCCCGCGGGGCCTCCTTTGAGGAGCTGTGCCACAACTATGCCCAGGAC CGGCTGCAGAGGCTCTTCCATGAGCGCACCTTTGTGCAGGAGTTGGAAAGATACAAAGAG GAGAACATCGAGGTGGCATTTGATGATTTGGAGCCAGCCACGGACGACTCTGTGGCCACA GTGGACCAAGCCTGCCATCAGTCCCTGGTCCGCTCCCTGGCCCGCACGGACGAGGCGAGG GGCCTGCTGTGGTTATTGGAAGAAGAGGCGCTGGTGCCTGGGGCCACTGAGGATGCCCTC CTGGAACGCCTTTTCTCCTACTACGGCCCCCGGGAAGGTGACAAAAAAGGCCAGAGCCCC CTCCTGCGCAGCAGCAAACCACACCATTTTCTCCTGGGCCACAGCCACGGCACCAACTGG GTGGAGTACAACGCAGCTGGCTGGCTGAGCTACACCAAGCAGAACCCGGCCACCCAGAAC GCCCCCCGGCTCCTGCAGGACTCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTCCAGGCCAGCACCCTGCAGCGCTCCACCTCCTTCCGCCAGGGCCCTGAGGAGAGCAGC CTGGGGGACAGCACAGGCCCCAAACTAAGCGCACTGGAGTGCTTGGAGGGCATGGCGTCT GGCCTCTACAGCGAGCTCTTCACGCTTCTCATTTCCCTGGTGAACAGGGCTCTCAAGTCT AGCCAGCACTCGCTCTGCTCTATGATGATCGTGGACACTCCCGGCTTCCAGAACCCTGAG CAGGGTGGGTCAGCCCGCGGGGCCTCCTTTGAGGAGCTGTGCCACAACTATGCCCAGGAC CGGCTGCAGAGGCTCTTCCATGAGCGCACCTTTGTGCAGGAGTTGGAAAGATACAAAGAG GAGAACATCGAGGTGGCATTTGATGATTTGGAGCCAGCCACGGACGACTCTGTGGCCACA GTGGACCAAGCCTGCCATCAGTCCCTGGTCCGCTCCCTGGCCCGCACGGACGAGGCGAGG GGCCTGCTGTGGTTATTGGAAGAAGAGGCGCTGGTGCCTGGGGCCACTGAGGATGCCCTC CTGGAACGCCTTTTCTCCTACTACGGCCCCCGGGAAGGTGACAAAAAAGGCCAGAGCCCC CTCCTGCGCAGCAGCAAACCACACCATTTTCTCCTGGGCCACAGCCACGGCACCAACTGG GTGGAGTACAACGCAGCTGGCTGGCTGAGCTACACCAAGCAGAACCCGGCCACCCAGAAC GCCCCCCGGCTCCTGCAGGACTCC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 622-744, - strand, RNAz p=0.748414 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 622-744, - strand, RNAz p=0.748414 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 183-361, gnl|bosTau2|chr17 (40107347-40107169) | |
| 183-361, gnl|Hg17|chr22 (24549312-24549490) | |
| 183-361, gnl|Mm7|chr5 (112027300-112027122) | |
| 582-744, gnl|bosTau2|chr19 (14012565-14012403) | |
| 582-744, gnl|canFam2|chr9 (46588536-46588731) | |
| 582-744, gnl|danRer3|chrNA (2275544-2275373) | |
| 582-744, gnl|dasNov1|scaffold_6487 (10921-10725) | |
| 582-744, gnl|echTel1|scaffold_311073 (28105-27915) | |
| 582-744, gnl|fr1|chrUn (11197010-11197197) | |
| 582-744, gnl|galGal2|chr19 (5549896-5550071) | |
| 582-744, gnl|hg17|chr17 (24462548-24462744) | |
| 582-744, gnl|Hg17|chr17 (24462732-24462573) | |
| 582-744, gnl|loxAfr1|scaffold_608 (25436-25247) | |
| 582-744, gnl|mm7|chr11 (77909537-77909351) | |
| 582-744, gnl|Mm7|chr11 (77909363-77909520) | |
| 582-744, gnl|monDom2|scaffold_44 (15155905-15156099) | |
| 582-744, gnl|oryCun1|scaffold_206953 (131935-132122) | |
| 582-744, gnl|panTro1|chr19 (27808130-27808326) | |
| 582-744, gnl|rheMac2|chr16 (24330550-24330746) | |
| 582-744, gnl|rn3|chr10 (63882547-63882361) | |
| 582-744, gnl|tetNig1|chr16 (8900496-8900672) | |
| 582-744, gnl|xenTro1|scaffold_370 (416958-416777) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 183-361, gnl|bosTau2|chr17 (40107347-40107169) | |
| 183-361, gnl|Hg17|chr22 (24549312-24549490) | |
| 183-361, gnl|Mm7|chr5 (112027300-112027122) | |
| 582-744, gnl|bosTau2|chr19 (14012565-14012403) | |
| 582-744, gnl|canFam2|chr9 (46588536-46588731) | |
| 582-744, gnl|danRer3|chrNA (2275544-2275373) | |
| 582-744, gnl|dasNov1|scaffold_6487 (10921-10725) | |
| 582-744, gnl|echTel1|scaffold_311073 (28105-27915) | |
| 582-744, gnl|fr1|chrUn (11197010-11197197) | |
| 582-744, gnl|galGal2|chr19 (5549896-5550071) | |
| 582-744, gnl|hg17|chr17 (24462548-24462744) | |
| 582-744, gnl|Hg17|chr17 (24462732-24462573) | |
| 582-744, gnl|loxAfr1|scaffold_608 (25436-25247) | |
| 582-744, gnl|mm7|chr11 (77909537-77909351) | |
| 582-744, gnl|Mm7|chr11 (77909363-77909520) | |
| 582-744, gnl|monDom2|scaffold_44 (15155905-15156099) | |
| 582-744, gnl|oryCun1|scaffold_206953 (131935-132122) | |
| 582-744, gnl|panTro1|chr19 (27808130-27808326) | |
| 582-744, gnl|rheMac2|chr16 (24330550-24330746) | |
| 582-744, gnl|rn3|chr10 (63882547-63882361) | |
| 582-744, gnl|tetNig1|chr16 (8900496-8900672) | |
| 582-744, gnl|xenTro1|scaffold_370 (416958-416777) |