Ss1.1-Pig4-TMW8053P01.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTGACTATGACCATCACACGAGATGAGTATCCAGCCTACCCTATGGTGCTCCGGGGAATT AATCAGAAGGCAACCTTTCCACAGTACCAGCCTGTGATCATGCTGGAGAAGGGCTATACC ATCCACTGGAATGGACCAGCCCCGAGGACTGCTTTTCTGTACCTCATAAACTTCAACAAG AATGACTGGATTCGAGTTGGCCTCTGCTATCCGTCCAACACAAGTTTTCAGGTTACCTTT GGCTTTTTACAGCGGCATAATGGCTCATTATCCAAAATGGAAGACTATGAGCCTGTGCAT TCGCTGGAAGAATTGCAGAGGAAGCAGTCTGAAAGGAAATTCTATTTTGACTCCAGCACA GGGTTACTGTTTTTGTATCTCAAAGCCAAAAGCCACAGGGATGGTCACAGTTACTGTTCA TCTCAGGGATGTGAAAGAGTCAAGATCCAGGCAACAACAGACTCAAAAGACATTAGTAAC TGCATGGCCAAAGCATATCCCCGGTATTACAGAAAGCCATCAGTACTCAAGCCAATGCCA TCCATGCTCAAGGGACCCTGTCAAGGCTGCGGGACTCGTCAGGTGGTGTTTACCAGTGAT CCTCATAAAAGCTACCTCCCTGTGCAATTCTGGTCACCCAGTCAAGCACAGACTCAGAAT GGAGACCTGTCTGTTATTTCTATCAACGGCCAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTGACTATGACCATCACACGAGATGAGTATCCAGCCTACCCTATGGTGCTCCGGGGAATT AATCAGAAGGCAACCTTTCCACAGTACCAGCCTGTGATCATGCTGGAGAAGGGCTATACC ATCCACTGGAATGGACCAGCCCCGAGGACTGCTTTTCTGTACCTCATAAACTTCAACAAG AATGACTGGATTCGAGTTGGCCTCTGCTATCCGTCCAACACAAGTTTTCAGGTTACCTTT GGCTTTTTACAGCGGCATAATGGCTCATTATCCAAAATGGAAGACTATGAGCCTGTGCAT TCGCTGGAAGAATTGCAGAGGAAGCAGTCTGAAAGGAAATTCTATTTTGACTCCAGCACA GGGTTACTGTTTTTGTATCTCAAAGCCAAAAGCCACAGGGATGGTCACAGTTACTGTTCA TCTCAGGGATGTGAAAGAGTCAAGATCCAGGCAACAACAGACTCAAAAGACATTAGTAAC TGCATGGCCAAAGCATATCCCCGGTATTACAGAAAGCCATCAGTACTCAAGCCAATGCCA TCCATGCTCAAGGGACCCTGTCAAGGCTGCGGGACTCGTCAGGTGGTGTTTACCAGTGAT CCTCATAAAAGCTACCTCCCTGTGCAATTCTGGTCACCCAGTCAAGCACAGACTCAGAAT GGAGACCTGTCTGTTATTTCTATCAACGGCCAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 362-520, - strand, RNAz p=0.877885 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 362-520, - strand, RNAz p=0.877885 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-184, gnl|bosTau2|chr8 (22640288-22640105) | |
| 1-184, gnl|canFam2|chr1 (89072465-89072328) | |
| 1-184, gnl|danRer3|chr5 (13305829-13305964) | |
| 1-184, gnl|dasNov1|scaffold_5492 (39021-38884) | |
| 1-184, gnl|echTel1|scaffold_219567 (4145-4008) | |
| 1-184, gnl|fr1|chrUn (320686763-320686625) | |
| 1-184, gnl|galGal2|chrZ (16348984-16349118) | |
| 1-184, gnl|hg17|chr9 (71549055-71549192) | |
| 1-184, gnl|Hg17|chr9 (71549243-71549060) | |
| 1-184, gnl|loxAfr1|scaffold_28999 (15933-16071) | |
| 1-184, gnl|mm7|chr19 (21533776-21533634) | |
| 1-184, gnl|Mm7|chr19 (21533581-21533769) | |
| 1-184, gnl|monDom2|scaffold_17 (17817892-17817755) | |
| 1-184, gnl|oryCun1|scaffold_183484 (37681-37544) | |
| 1-184, gnl|panTro1|chr11 (55367737-55367874) | |
| 1-184, gnl|rheMac2|chr15 (80483363-80483500) | |
| 1-184, gnl|rn3|chr1 (225241738-225241600) | |
| 1-184, gnl|tetNig1|chr12 (916338-916200) | |
| 1-184, gnl|xenTro1|scaffold_130 (520342-520489) | |
| 362-584, gnl|bosTau2|chr8 (22633932-22633710) | |
| 362-584, gnl|Hg17|chr9 (71542675-71542453) | |
| 362-584, gnl|Mm7|chr19 (21542752-21542974) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-184, gnl|bosTau2|chr8 (22640288-22640105) | |
| 1-184, gnl|canFam2|chr1 (89072465-89072328) | |
| 1-184, gnl|danRer3|chr5 (13305829-13305964) | |
| 1-184, gnl|dasNov1|scaffold_5492 (39021-38884) | |
| 1-184, gnl|echTel1|scaffold_219567 (4145-4008) | |
| 1-184, gnl|fr1|chrUn (320686763-320686625) | |
| 1-184, gnl|galGal2|chrZ (16348984-16349118) | |
| 1-184, gnl|hg17|chr9 (71549055-71549192) | |
| 1-184, gnl|Hg17|chr9 (71549243-71549060) | |
| 1-184, gnl|loxAfr1|scaffold_28999 (15933-16071) | |
| 1-184, gnl|mm7|chr19 (21533776-21533634) | |
| 1-184, gnl|Mm7|chr19 (21533581-21533769) | |
| 1-184, gnl|monDom2|scaffold_17 (17817892-17817755) | |
| 1-184, gnl|oryCun1|scaffold_183484 (37681-37544) | |
| 1-184, gnl|panTro1|chr11 (55367737-55367874) | |
| 1-184, gnl|rheMac2|chr15 (80483363-80483500) | |
| 1-184, gnl|rn3|chr1 (225241738-225241600) | |
| 1-184, gnl|tetNig1|chr12 (916338-916200) | |
| 1-184, gnl|xenTro1|scaffold_130 (520342-520489) | |
| 362-584, gnl|bosTau2|chr8 (22633932-22633710) | |
| 362-584, gnl|Hg17|chr9 (71542675-71542453) | |
| 362-584, gnl|Mm7|chr19 (21542752-21542974) |