Non-Coding RNA Search

Ss1.1-Pig4-TMW8054M06.3

Sequence:


               
               GGTCGCGGGCGCTCGCTGCCGGCCGCCGCTCAGCCGCCGCCGCCGAGGCCGTCGGCCCGA
GCCTCCGCCATGGACTTCGAGGACGATTATACACACTCTGCTTGCAGAAATACTTATCAG
AGCTTTAACGGAATGGATCGTGATTACGGCCCTGGATCTTATGGAGGGATGGATCGTGAC
TATGGCCATGGATCCTATGGGGGTCAGAGATCCATGGACTCCTACCTAAACCAGTCATAT
GGCATGGACAGTCACAGTGGTGGTGGTGGGGGTAGCAGGTTTGGACCTTATGAGTCTTAC
GACTCCAGGTCTTCTCTGGGTGGGCGAGATCTGTACAGATCTGGCTATGGTTTTAATGAA
CCCGAACAAAGCCGCTTCGGAGGTAGTTATGGTGGTCGATTTGAGAGCTCCTACCGGAAT
AGCCTTGACTCTTTCGGAGGTAGAAGCCAGGGCGGGTCTAGCTGGGAAGCACCTTACTCC
CGTTCAAAATTGAGGCCTGGGTTTATGGAGGACAGAGGAAGAGAGGGTTGCTCTTCCTAC
AGCAGTTTTTCTTCACCCCATATGAAGCCTGCACCTGTAGGCTCTCGGGGGAGAGGAACG
CCTGCTTATCCTGAAAGTGCGTTTGGAAGCAGAAACTATGATGCTTTTGGAGGACCATCA
ACAGGCAGAGGCCGAGGCCGAGGACATATGAGTGATTTTGGAAGCATTCATAGACCTGGA
ATTGTTGTTGACTATCAAAACAAACCCACCAGTGTGACAGTTGCTGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTCGCGGGCGCTCGCTGCCGGCCGCCGCTCAGCCGCCGCCGCCGAGGCCGTCGGCCCGA
GCCTCCGCCATGGACTTCGAGGACGATTATACACACTCTGCTTGCAGAAATACTTATCAG
AGCTTTAACGGAATGGATCGTGATTACGGCCCTGGATCTTATGGAGGGATGGATCGTGAC
TATGGCCATGGATCCTATGGGGGTCAGAGATCCATGGACTCCTACCTAAACCAGTCATAT
GGCATGGACAGTCACAGTGGTGGTGGTGGGGGTAGCAGGTTTGGACCTTATGAGTCTTAC
GACTCCAGGTCTTCTCTGGGTGGGCGAGATCTGTACAGATCTGGCTATGGTTTTAATGAA
CCCGAACAAAGCCGCTTCGGAGGTAGTTATGGTGGTCGATTTGAGAGCTCCTACCGGAAT
AGCCTTGACTCTTTCGGAGGTAGAAGCCAGGGCGGGTCTAGCTGGGAAGCACCTTACTCC
CGTTCAAAATTGAGGCCTGGGTTTATGGAGGACAGAGGAAGAGAGGGTTGCTCTTCCTAC
AGCAGTTTTTCTTCACCCCATATGAAGCCTGCACCTGTAGGCTCTCGGGGGAGAGGAACG
CCTGCTTATCCTGAAAGTGCGTTTGGAAGCAGAAACTATGATGCTTTTGGAGGACCATCA
ACAGGCAGAGGCCGAGGCCGAGGACATATGAGTGATTTTGGAAGCATTCATAGACCTGGA
ATTGTTGTTGACTATCAAAACAAACCCACCAGTGTGACAGTTGCTGCC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q7Z6C2_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q7Z6C2_HUMAN

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               158-278, + strand, RNAz p=0.990581

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               158-278, + strand, RNAz p=0.990581

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               1-278, gnl|bosTau2|chr11 (24156442-24156724)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-278, gnl|bosTau2|chr11 (24156442-24156724)