Non-Coding RNA Search

Ss1.1-Pig4-TMW8054M19.5

Sequence:


               
               TTGGGCAGGGCAGAAAGTTTGGGTCAGAAGCCATATGACCCGGGCATGTTTTATTTAGAA
AACATAATGTTCAAAAATTTTTAGAATAAGTTACTATCATTCACAAATCTTGTTTTTGGT
CTCTTATTTAAAAAAAAAATCTGGATTTCCCTTGTGGCACAGCAGGTGAAGGATCCAGTG
------------------------CAGGCTTGATCCCTGGCCCAGGAAATTCTGCATGCC
ATGGGCGCTGCCAAAAAAAAAAGGCAACATTAACACACAACCATTCAAAATCTATGAGAG
GCCACAAAAGCAGTGCTTAGAGTTCATAGCAATACAGGCCTTGCCCCAAAAAAAGAAAAA
AAAAATTTAACAACTTTACCCGCCACCTAGAAGATTTAGAAAAAGAAGAATAAAACCTAA
AGTCAGCAGAAGGAAGGAAATCATAAAGATCAGAGAGGAAATCAATAAAACAGAGACTCA
AAAAACAATAGGAAAAAAATCAATAAAAAAACAAGAGCTGGTTCTTTGAAAGGATAAACA
AAATTGACAAACGTCTGGCCAGACTCCTCAAGAAGAGAAAAAGAACTCAAACTAAGAAGT
GAAAAAGGAGAAATCCCAACAGATACTGCAAAATAACAAAATATCATTAAGAGAATACTA
TGAACAATTATATACCAACAAATTTGACAAGCTAGAAGAATGGACAATTTTCTAGAGACT
TACAGCCCACCAAAACTGAATCAAGAATAAATAGATCAACTGAACAGACCAATCACTAGA
AAGGAAGTTGATGATGTCATAAAAACACTCCCGACAAAGAAAAGTCCAGGACCGGATGGC
TTCATGCGCAAA------------------------------------------------
------------------------------------------------------------
------------------------------------------------AGCCGCGGCGCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGGGCAGGGCAGAAAGTTTGGGTCAGAAGCCATATGACCCGGGCATGTTTTATTTAGAA
AACATAATGTTCAAAAATTTTTAGAATAAGTTACTATCATTCACAAATCTTGTTTTTGGT
CTCTTATTTAAAAAAAAAATCTGGATTTCCCTTGTGGCACAGCAGGTGAAGGATCCAGTG
------------------------CAGGCTTGATCCCTGGCCCAGGAAATTCTGCATGCC
ATGGGCGCTGCCAAAAAAAAAAGGCAACATTAACACACAACCATTCAAAATCTATGAGAG
GCCACAAAAGCAGTGCTTAGAGTTCATAGCAATACAGGCCTTGCCCCAAAAAAAGAAAAA
AAAAATTTAACAACTTTACCCGCCACCTAGAAGATTTAGAAAAAGAAGAATAAAACCTAA
AGTCAGCAGAAGGAAGGAAATCATAAAGATCAGAGAGGAAATCAATAAAACAGAGACTCA
AAAAACAATAGGAAAAAAATCAATAAAAAAACAAGAGCTGGTTCTTTGAAAGGATAAACA
AAATTGACAAACGTCTGGCCAGACTCCTCAAGAAGAGAAAAAGAACTCAAACTAAGAAGT
GAAAAAGGAGAAATCCCAACAGATACTGCAAAATAACAAAATATCATTAAGAGAATACTA
TGAACAATTATATACCAACAAATTTGACAAGCTAGAAGAATGGACAATTTTCTAGAGACT
TACAGCCCACCAAAACTGAATCAAGAATAAATAGATCAACTGAACAGACCAATCACTAGA
AAGGAAGTTGATGATGTCATAAAAACACTCCCGACAAAGAAAAGTCCAGGACCGGATGGC
TTCATGCGCAAA------------------------------------------------
------------------------------------------------------------
------------------------------------------------AGCCGCGGCGCG

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

Help | Less info


               
               220-804, gnl|bosTau2|chr1 (38417298-38417879)

Aligned organism(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               220-804, gnl|bosTau2|chr1 (38417298-38417879)