Ss1.1-Pig4-TMW8055O09.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TAATGTTTGAAATCATGAAAACTTACGGCCATACTTATGAAAAACATTGGTGGCAGGATT TATTTAGAATTGTTTTCAGAATCTTTGATAACATGAAATTGCCAGAACAGCAGACAGAGA AAGCTGAGTGGATGACAACGACTTGCAATCATGCTCTCTATGCCATCTGTGATGTGTTCA CCCAGTATTTGGAAGTGCTCAGCGATGTGCTTCTGGATGACATTTTTGCCCAGCTCTACT GGTGTGCAGCAAGACAATGAACAGTTAGCACGATCTGGTACAAACTGCTTAGAGAACGTT GTTATTCTGAACGGTGAAAAATTTACCCTAGAAATCTGGGATAAAACTTGTAACTGCACA CTGGATATCTTCAAAACCACAATCCCACATGCGCTCTTGACCTGGCGCCCCGCTTCTGGA GAAACTGCTCCCCCACCTCTGTCTCCTGTGAATGAAAAACAGTTGGATACGGTTTCACAG AAATCTGTAGATATTCATGATTCTATTCAGCCAAGATCTGCAGATAATAGACAGCAAGCT CCATTGGCTTCTGTCTCTACTGTGAATGAGGAAGCCAGCAAAATTAAATCCATAGCAAAA TTTCCAGAACAAAAATTGTTTGCCGCCCTGTTGATTAAATGTGTTGTGCAGCTGGAACTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TAATGTTTGAAATCATGAAAACTTACGGCCATACTTATGAAAAACATTGGTGGCAGGATT TATTTAGAATTGTTTTCAGAATCTTTGATAACATGAAATTGCCAGAACAGCAGACAGAGA AAGCTGAGTGGATGACAACGACTTGCAATCATGCTCTCTATGCCATCTGTGATGTGTTCA CCCAGTATTTGGAAGTGCTCAGCGATGTGCTTCTGGATGACATTTTTGCCCAGCTCTACT GGTGTGCAGCAAGACAATGAACAGTTAGCACGATCTGGTACAAACTGCTTAGAGAACGTT GTTATTCTGAACGGTGAAAAATTTACCCTAGAAATCTGGGATAAAACTTGTAACTGCACA CTGGATATCTTCAAAACCACAATCCCACATGCGCTCTTGACCTGGCGCCCCGCTTCTGGA GAAACTGCTCCCCCACCTCTGTCTCCTGTGAATGAAAAACAGTTGGATACGGTTTCACAG AAATCTGTAGATATTCATGATTCTATTCAGCCAAGATCTGCAGATAATAGACAGCAAGCT CCATTGGCTTCTGTCTCTACTGTGAATGAGGAAGCCAGCAAAATTAAATCCATAGCAAAA TTTCCAGAACAAAAATTGTTTGCCGCCCTGTTGATTAAATGTGTTGTGCAGCTGGAACTC |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 465-598, + strand, RNAz p=0.972741 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 465-598, + strand, RNAz p=0.972741 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 252-393, gnl|bosTau2|chr14 (17901484-17901625) | |
| 252-393, gnl|canFam2|chr29 (19735075-19735248) | |
| 252-393, gnl|danRer3|chr11 (11439664-11439501) | |
| 252-393, gnl|dasNov1|scaffold_904 (129310-129471) | |
| 252-393, gnl|echTel1|scaffold_217701 (9939-10112) | |
| 252-393, gnl|fr1|chrUn (87685339-87685165) | |
| 252-393, gnl|galGal2|chr2 (114860337-114860512) | |
| 252-393, gnl|hg17|chr8 (68292567-68292740) | |
| 252-393, gnl|Hg17|chr8 (68292711-68292570) | |
| 252-393, gnl|loxAfr1|scaffold_32580 (21438-21265) | |
| 252-393, gnl|mm7|chr1 (10295995-10296168) | |
| 252-393, gnl|Mm7|chr1 (10296139-10295998) | |
| 252-393, gnl|monDom2|scaffold_4 (94267229-94267056) | |
| 252-393, gnl|oryCun1|scaffold_173755 (80520-80369) | |
| 252-393, gnl|panTro1|chr7 (70318330-70318503) | |
| 252-393, gnl|rheMac2|chr8 (69844594-69844767) | |
| 252-393, gnl|rn3|chr5 (8577237-8577064) | |
| 252-393, gnl|tetNig1|chr6 (2459312-2459138) | |
| 252-393, gnl|xenTro1|scaffold_109 (431221-431393) | |
| 465-598, gnl|bosTau2|chr14 (17904080-17904213) | |
| 465-598, gnl|Hg17|chr8 (68286405-68286272) | |
| 465-598, gnl|Mm7|chr1 (10290149-10290016) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 252-393, gnl|bosTau2|chr14 (17901484-17901625) | |
| 252-393, gnl|canFam2|chr29 (19735075-19735248) | |
| 252-393, gnl|danRer3|chr11 (11439664-11439501) | |
| 252-393, gnl|dasNov1|scaffold_904 (129310-129471) | |
| 252-393, gnl|echTel1|scaffold_217701 (9939-10112) | |
| 252-393, gnl|fr1|chrUn (87685339-87685165) | |
| 252-393, gnl|galGal2|chr2 (114860337-114860512) | |
| 252-393, gnl|hg17|chr8 (68292567-68292740) | |
| 252-393, gnl|Hg17|chr8 (68292711-68292570) | |
| 252-393, gnl|loxAfr1|scaffold_32580 (21438-21265) | |
| 252-393, gnl|mm7|chr1 (10295995-10296168) | |
| 252-393, gnl|Mm7|chr1 (10296139-10295998) | |
| 252-393, gnl|monDom2|scaffold_4 (94267229-94267056) | |
| 252-393, gnl|oryCun1|scaffold_173755 (80520-80369) | |
| 252-393, gnl|panTro1|chr7 (70318330-70318503) | |
| 252-393, gnl|rheMac2|chr8 (69844594-69844767) | |
| 252-393, gnl|rn3|chr5 (8577237-8577064) | |
| 252-393, gnl|tetNig1|chr6 (2459312-2459138) | |
| 252-393, gnl|xenTro1|scaffold_109 (431221-431393) | |
| 465-598, gnl|bosTau2|chr14 (17904080-17904213) | |
| 465-598, gnl|Hg17|chr8 (68286405-68286272) | |
| 465-598, gnl|Mm7|chr1 (10290149-10290016) |