Ss1.1-Pig4-TMW8055P23.5
|
GTGCCCTTGGCCACAGCACCAGGCCTGGGCCCTCGACTCATAACTTCAGGACCTGGTGCC
AAGAAAATAAGGATTTAGGCAAGAAGGAGGCGAAAGGAAATTTGTGGAGAGAGGTTGCCA
AACCCCAGCGACCCCAAGGAGGCCCTGGTCCTCCAGGGATGGAATTGTCCCTGCCTCAGG
CTGGGGCCAAGAGTGGGCTGCAGACACTGGATCCAAGAATGGCCCAGCTGGTAGGGTCCA
TGCTTCCCCATCTGTTGGGCCAGATAATCTGGAGCACCCAGAGAGGGCCAGTTTCTTATC
CACACTCACACAGCACATGCACGACAGTTCTGACCAAGAACCTGCCATCCGCAGGCTGCC
TGTCCCTCCTTCCAAGACTCTGTCGGTCCCAGCAGGCATGCTGCTCCCACCCCTCTCTGG
CCTCCGCGCCCTGGTTTCCGCAGAAGAGAGAGGGCAGGCTGGTCAGCAACTGCCTTTTCC
CGGCTCCATGGCGAAGACAGTTCTGGATTCTGCCCTCCCTCCCACCTCCCCACGCTTTCT
GTCAGTCCCAGGAACACACCCATGTACACACATCACAGCCTCTTTTTTCACACCGCCCCC
CCTCCCTGTTCTCCACTAACTCCCCGGCTCCCAGGACTGGAAGGAACCCCCAAGGTCATC
TGGTTCTCCTCTCCCCACTCAGAATTGCAGCATGGATGTCTTCCGCAAGATCCCCGCCAA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GTGCCCTTGGCCACAGCACCAGGCCTGGGCCCTCGACTCATAACTTCAGGACCTGGTGCC
AAGAAAATAAGGATTTAGGCAAGAAGGAGGCGAAAGGAAATTTGTGGAGAGAGGTTGCCA
AACCCCAGCGACCCCAAGGAGGCCCTGGTCCTCCAGGGATGGAATTGTCCCTGCCTCAGG
CTGGGGCCAAGAGTGGGCTGCAGACACTGGATCCAAGAATGGCCCAGCTGGTAGGGTCCA
TGCTTCCCCATCTGTTGGGCCAGATAATCTGGAGCACCCAGAGAGGGCCAGTTTCTTATC
CACACTCACACAGCACATGCACGACAGTTCTGACCAAGAACCTGCCATCCGCAGGCTGCC
TGTCCCTCCTTCCAAGACTCTGTCGGTCCCAGCAGGCATGCTGCTCCCACCCCTCTCTGG
CCTCCGCGCCCTGGTTTCCGCAGAAGAGAGAGGGCAGGCTGGTCAGCAACTGCCTTTTCC
CGGCTCCATGGCGAAGACAGTTCTGGATTCTGCCCTCCCTCCCACCTCCCCACGCTTTCT
GTCAGTCCCAGGAACACACCCATGTACACACATCACAGCCTCTTTTTTCACACCGCCCCC
CCTCCCTGTTCTCCACTAACTCCCCGGCTCCCAGGACTGGAAGGAACCCCCAAGGTCATC
TGGTTCTCCTCTCCCCACTCAGAATTGCAGCATGGATGTCTTCCGCAAGATCCCCGCCAA |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
138-550, gnl|bosTau2|chr15 (46735358-46735771) |
|
138-550, gnl|canFam2|chr18 (47425451-47424473) |
|
138-550, gnl|echTel1|scaffold_231082 (10875-10016) |
|
138-550, gnl|hg17|chr11 (44907656-44908617) |
|
138-550, gnl|Hg17|chr11 (44907783-44908179) |
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138-550, gnl|mm7|chr2 (93054763-93054083) |
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138-550, gnl|panTro1|chr9 (45412523-45413484) |
|
138-550, gnl|rheMac2|chr14 (27179410-27178463) |
|
138-550, gnl|rn3|chr3 (77501288-77500556) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
138-550, gnl|bosTau2|chr15 (46735358-46735771) |
|
138-550, gnl|canFam2|chr18 (47425451-47424473) |
|
138-550, gnl|echTel1|scaffold_231082 (10875-10016) |
|
138-550, gnl|hg17|chr11 (44907656-44908617) |
|
138-550, gnl|Hg17|chr11 (44907783-44908179) |
|
138-550, gnl|mm7|chr2 (93054763-93054083) |
|
138-550, gnl|panTro1|chr9 (45412523-45413484) |
|
138-550, gnl|rheMac2|chr14 (27179410-27178463) |
|
138-550, gnl|rn3|chr3 (77501288-77500556) |
