Ss1.1-Pig4-TMW8056B01.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTGCTCCCTCCGGGCCGAGTGCTGGTTCTCAGGCGCTGCTTACCGCTCACGCCGGCTCTC GGGGCCGCCCGCTCCTCTCGGCCCTCCTTCTCCCTGCCTCGCCAACGCCGCCGCCGGAGG AGGATTGATGTCCCTTCAGCATCATGCAGCCGCCGCCGAGGAAGGTGAAAGTTACACAAG AACTGAAAAACATTCAAGTTGAGCAGATGACAAAACTTCAAGCCAAACATCAAGCAGAAT GTGATTTGCTTGAAGATATGAGGACATTCAGTCAGAAGAAGGCTGCTATTGAAAGAGAGT ATGCACAGGGTATCCAGAAGTTGGCTAGTCAGTATCTGAAGAGAGATTGGCCCGGAATAA AAACTGATGATCGGAGTGATTACAGGAGCATGTATCCTGTTTGGAAATCTTTTCTCGAGG GAACAATGCAGGTAGCCCAGTCTCGGATCAATATATGTGAAAACTATAAAAACTTCATTT CTGAGCCTGCAAGGACAGTGAGAAGCTTAAAAGAACAGCAACTAAAAAGGTGTGTGGACC AGTTGACAAAGATCCAGACTGAATTACAAGAGACAGTGAAAGATTTAGCTAAAGGCAAAA AGAAGTACTTTGAGACCGAACAGATGGCTCATGCAGTACGAGAGAAAGCTGACATCGAGG CAAAATCTAAACTTAGTCTTTTTCAATCAAGAATCAGTTTACAGAAGGCAAGTGTAAAGT TAAAAGCCCGGCGATCTGAGTGTAATTCCAAAGCTACCCACGCGAGGAATGATTATCTTC TTACACTGGCAGCAGCAAATGCACACCAGGATCGCTACTATCAGACAGACTTAGTTAACA TTATGAAGGCTCTTGATGGAAATGTGTATGACCACCTCAAGGATTATTTAATAGCCTTCA GCCGGACCGAGCTAGAGACATGCCAAGCTGTGCAGAACACATTCCAGTTTTTATTAGAAA CCTCCAGCAAGGTGGTACGAGACTATAATCTTCAGCTGTTTTTACGAGAGAATGCTGTAT TCCACAAACCCCAGCCCTTCCAGTTCCAGCCTTGTGACAGTGACACTAGCCGACAGTTGG AATCGGAAACTGGGACCACCGAGGAGCACAGTCTAAACAAGGAGGCTCGGAAATGGGCCA CCCGTGTGGCACGAGAGCACAAAAATATTGTTCACCAGCAACGGGTTCTAGATGATCTGG AATGTCATGGAGTTGCAGCGTCAGAACAAAGCCGAACAGAGTTGGAACAGAAAATAGATG AAGCTAGAGAGAATATTCGTAAAGCAGAGATAATTAAGTTGAAAGCTGAAGCCCGGCTGG ACTTGCTCAAGCAGATTGGCGTTTCTGTGGACACGTGGCTGAAGAGTGCCATGAACCAAG TGATGGAGGAACTGGAAAACGAGCGATGGGCCCGCCTTCCCGCAGGGACCAGTAATGGAG CCTTACATTCACTTAATACAGATACTGAAAAAGAAGAAGGAGAAGAGTTTGAAGACAATA TGGATGTTTTTGATGACAGCAGTTCCAGCCCTTCTGGCACCTTAAGAAATTATCCACTCA CCTGCAAAGTTGTTTATTCTTACAAGGCTTCTCAACCAGATGAGTTGACCATTGAGGAGC ATGAGGTGTTAGAAGTGATTGAAGATGGAGATATGGAAGACTGGGTAAAGGCTCGAAATA AAGTTGGCCAAGTGGGTTACGTGCCGGAGAAGTACCTCCAGTTCCCCACCTCCAGCAGTC TGCTGAGCATGCTGCAGTCCCTGGCCGCCCTGGACAGCCGCTCCCACACGTCCAGCAATT CCACGGAGGCCGAACTCGTTTCCGGCAGCCTCAACGGAGATGCCAGTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTGCTCCCTCCGGGCCGAGTGCTGGTTCTCAGGCGCTGCTTACCGCTCACGCCGGCTCTC GGGGCCGCCCGCTCCTCTCGGCCCTCCTTCTCCCTGCCTCGCCAACGCCGCCGCCGGAGG AGGATTGATGTCCCTTCAGCATCATGCAGCCGCCGCCGAGGAAGGTGAAAGTTACACAAG AACTGAAAAACATTCAAGTTGAGCAGATGACAAAACTTCAAGCCAAACATCAAGCAGAAT GTGATTTGCTTGAAGATATGAGGACATTCAGTCAGAAGAAGGCTGCTATTGAAAGAGAGT ATGCACAGGGTATCCAGAAGTTGGCTAGTCAGTATCTGAAGAGAGATTGGCCCGGAATAA AAACTGATGATCGGAGTGATTACAGGAGCATGTATCCTGTTTGGAAATCTTTTCTCGAGG GAACAATGCAGGTAGCCCAGTCTCGGATCAATATATGTGAAAACTATAAAAACTTCATTT CTGAGCCTGCAAGGACAGTGAGAAGCTTAAAAGAACAGCAACTAAAAAGGTGTGTGGACC AGTTGACAAAGATCCAGACTGAATTACAAGAGACAGTGAAAGATTTAGCTAAAGGCAAAA AGAAGTACTTTGAGACCGAACAGATGGCTCATGCAGTACGAGAGAAAGCTGACATCGAGG CAAAATCTAAACTTAGTCTTTTTCAATCAAGAATCAGTTTACAGAAGGCAAGTGTAAAGT TAAAAGCCCGGCGATCTGAGTGTAATTCCAAAGCTACCCACGCGAGGAATGATTATCTTC TTACACTGGCAGCAGCAAATGCACACCAGGATCGCTACTATCAGACAGACTTAGTTAACA TTATGAAGGCTCTTGATGGAAATGTGTATGACCACCTCAAGGATTATTTAATAGCCTTCA GCCGGACCGAGCTAGAGACATGCCAAGCTGTGCAGAACACATTCCAGTTTTTATTAGAAA CCTCCAGCAAGGTGGTACGAGACTATAATCTTCAGCTGTTTTTACGAGAGAATGCTGTAT TCCACAAACCCCAGCCCTTCCAGTTCCAGCCTTGTGACAGTGACACTAGCCGACAGTTGG AATCGGAAACTGGGACCACCGAGGAGCACAGTCTAAACAAGGAGGCTCGGAAATGGGCCA CCCGTGTGGCACGAGAGCACAAAAATATTGTTCACCAGCAACGGGTTCTAGATGATCTGG AATGTCATGGAGTTGCAGCGTCAGAACAAAGCCGAACAGAGTTGGAACAGAAAATAGATG AAGCTAGAGAGAATATTCGTAAAGCAGAGATAATTAAGTTGAAAGCTGAAGCCCGGCTGG ACTTGCTCAAGCAGATTGGCGTTTCTGTGGACACGTGGCTGAAGAGTGCCATGAACCAAG TGATGGAGGAACTGGAAAACGAGCGATGGGCCCGCCTTCCCGCAGGGACCAGTAATGGAG CCTTACATTCACTTAATACAGATACTGAAAAAGAAGAAGGAGAAGAGTTTGAAGACAATA TGGATGTTTTTGATGACAGCAGTTCCAGCCCTTCTGGCACCTTAAGAAATTATCCACTCA CCTGCAAAGTTGTTTATTCTTACAAGGCTTCTCAACCAGATGAGTTGACCATTGAGGAGC ATGAGGTGTTAGAAGTGATTGAAGATGGAGATATGGAAGACTGGGTAAAGGCTCGAAATA AAGTTGGCCAAGTGGGTTACGTGCCGGAGAAGTACCTCCAGTTCCCCACCTCCAGCAGTC TGCTGAGCATGCTGCAGTCCCTGGCCGCCCTGGACAGCCGCTCCCACACGTCCAGCAATT CCACGGAGGCCGAACTCGTTTCCGGCAGCCTCAACGGAGATGCCAGTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 91 entry(ies) | More info |
| Aligned organism(s): 91 entry(ies) | Help | Less info |
| 163-263, gnl|bosTau2|chr15 (33550020-33550120) | |
| 163-263, gnl|canFam2|chr21 (28087977-28087857) | |
| 163-263, gnl|danRer3|chr18 (1469729-1469606) | |
| 163-263, gnl|dasNov1|scaffold_19649 (21464-21343) | |
| 163-263, gnl|echTel1|scaffold_285061 (7953-7832) | |
| 163-263, gnl|galGal2|chr1 (187511618-187511497) | |
| 163-263, gnl|hg17|chr11 (72528722-72528843) | |
| 163-263, gnl|Hg17|chr11 (72528823-72528723) | |
| 163-263, gnl|loxAfr1|scaffold_59803 (7408-7529) | |
| 163-263, gnl|mm7|chr7 (97157086-97156965) | |
| 163-263, gnl|Mm7|chr7 (97156983-97157083) | |
| 163-263, gnl|monDom2|scaffold_74 (4827901-4827780) | |
| 163-263, gnl|oryCun1|scaffold_194973 (6243-6364) | |
| 163-263, gnl|panTro1|chr9 (73805088-73805209) | |
| 163-263, gnl|rheMac2|chr14 (71255695-71255816) | |
| 163-263, gnl|rn3|chr1 (158627948-158627827) | |
| 163-263, gnl|tetNig1|chr10 (9540891-9540785) | |
| 163-263, gnl|xenTro1|scaffold_262 (1418452-1418558) | |
| 377-530, gnl|bosTau2|chr15 (33673954-33674107) | |
| 377-530, gnl|Hg17|chr11 (72389836-72389683) | |
| 377-530, gnl|Mm7|chr7 (97232625-97232778) | |
| 831-972, gnl|bosTau2|chr15 (33742613-33742755) | |
| 831-972, gnl|canFam2|chr21 (28316608-28316463) | |
| 831-972, gnl|danRer3|chrUn (95906106-95906251) | |
| 831-972, gnl|dasNov1|scaffold_74853 (39851-40002) | |
| 831-972, gnl|echTel1|scaffold_177081 (4333-4183) | |
| 831-972, gnl|fr1|chrUn (202669210-202669361) | |
| 831-972, gnl|hg17|chr11 (72310517-72310669) | |
| 831-972, gnl|Hg17|chr11 (72310665-72310520) | |
| 831-972, gnl|loxAfr1|scaffold_1390 (51387-51235) | |
| 831-972, gnl|mm7|chr7 (97280246-97280094) | |
| 831-972, gnl|Mm7|chr7 (97280095-97280241) | |
| 831-972, gnl|monDom2|scaffold_74 (5062198-5062044) | |
| 831-972, gnl|oryCun1|scaffold_210920 (87780-87931) | |
| 831-972, gnl|panTro1|chr9 (73586480-73586632) | |
| 831-972, gnl|rheMac2|chr14 (71011823-71011973) | |
| 831-972, gnl|rn3|chr1 (158800629-158800481) | |
| 831-972, gnl|xenTro1|scaffold_262 (1371009-1371164) | |
| 1068-1186, gnl|bosTau2|chr15 (33770085-33770203) | |
| 1068-1186, gnl|canFam2|chr21 (28347835-28347681) | |
| 1068-1186, gnl|danRer3|chr10 (33037624-33037766) | |
| 1068-1186, gnl|dasNov1|scaffold_74853 (1982-2137) | |
| 1068-1186, gnl|fr1|chrUn (202666674-202666815) | |
| 1068-1186, gnl|hg17|chr11 (72278504-72278659) | |
| 1068-1186, gnl|Hg17|chr11 (72278638-72278520) | |
| 1068-1186, gnl|loxAfr1|scaffold_72043 (4854-4699) | |
| 1068-1186, gnl|mm7|chr7 (97296827-97296672) | |
| 1068-1186, gnl|Mm7|chr7 (97296691-97296809) | |
| 1068-1186, gnl|panTro1|chr9 (73554511-73554666) | |
| 1068-1186, gnl|rheMac2|chr14 (70979964-70980119) | |
| 1068-1186, gnl|rn3|chr1 (158816834-158816679) | |
| 1068-1186, gnl|tetNig1|chrUn_random (143646549-143646695) | |
| 1068-1186, gnl|xenTro1|scaffold_262 (1359823-1359965) | |
| 1288-1450, gnl|bosTau2|chr15 (33786773-33786935) | |
| 1288-1450, gnl|Hg17|chr11 (72256721-72256559) | |
| 1288-1450, gnl|Mm7|chr7 (97305856-97306018) | |
| 1452-1590, gnl|bosTau2|chr15 (33801951-33802089) | |
| 1452-1590, gnl|canFam2|chr21 (28389625-28389488) | |
| 1452-1590, gnl|danRer3|chr10 (33033470-33033589) | |
| 1452-1590, gnl|echTel1|scaffold_219245 (3253-3116) | |
| 1452-1590, gnl|fr1|chrUn (202662042-202662157) | |
| 1452-1590, gnl|galGal2|chr1 (187592819-187592676) | |
| 1452-1590, gnl|hg17|chr11 (72238441-72238578) | |
| 1452-1590, gnl|Hg17|chr11 (72238582-72238444) | |
| 1452-1590, gnl|loxAfr1|scaffold_1390 (96887-96750) | |
| 1452-1590, gnl|mm7|chr7 (97317959-97317822) | |
| 1452-1590, gnl|Mm7|chr7 (97317816-97317954) | |
| 1452-1590, gnl|monDom2|scaffold_74 (5160668-5160531) | |
| 1452-1590, gnl|oryCun1|scaffold_211550 (37111-36974) | |
| 1452-1590, gnl|panTro1|chr9 (73514402-73514539) | |
| 1452-1590, gnl|rheMac2|chr14 (70938213-70938350) | |
| 1452-1590, gnl|rn3|chr1 (158844329-158844192) | |
| 1452-1590, gnl|tetNig1|chr10 (9560899-9560768) | |
| 1452-1590, gnl|xenTro1|scaffold_262 (1354215-1354352) | |
| 1669-1848, gnl|bosTau2|chr15 (33807560-33807739) | |
| 1669-1848, gnl|canFam2|chr21 (28395756-28395638) | |
| 1669-1848, gnl|danRer3|chr10 (33030941-33031074) | |
| 1669-1848, gnl|echTel1|scaffold_71738 (1712-1594) | |
| 1669-1848, gnl|fr1|chrUn (202661604-202661722) | |
| 1669-1848, gnl|galGal2|chr1 (187593659-187593541) | |
| 1669-1848, gnl|hg17|chr11 (72231841-72231959) | |
| 1669-1848, gnl|Hg17|chr11 (72232023-72231844) | |
| 1669-1848, gnl|mm7|chr7 (97323254-97323136) | |
| 1669-1848, gnl|Mm7|chr7 (97323070-97323249) | |
| 1669-1848, gnl|monDom2|scaffold_74 (5163144-5163026) | |
| 1669-1848, gnl|oryCun1|scaffold_211550 (40994-40876) | |
| 1669-1848, gnl|panTro1|chr9 (73507770-73507888) | |
| 1669-1848, gnl|rheMac2|chr14 (70930550-70930668) | |
| 1669-1848, gnl|rn3|chr1 (158849740-158849622) | |
| 1669-1848, gnl|tetNig1|chr10 (9561559-9561441) | |
| 1669-1848, gnl|xenTro1|scaffold_262 (1352831-1352949) |
| Aligned organism(s): 91 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 163-263, gnl|bosTau2|chr15 (33550020-33550120) | |
| 163-263, gnl|canFam2|chr21 (28087977-28087857) | |
| 163-263, gnl|danRer3|chr18 (1469729-1469606) | |
| 163-263, gnl|dasNov1|scaffold_19649 (21464-21343) | |
| 163-263, gnl|echTel1|scaffold_285061 (7953-7832) | |
| 163-263, gnl|galGal2|chr1 (187511618-187511497) | |
| 163-263, gnl|hg17|chr11 (72528722-72528843) | |
| 163-263, gnl|Hg17|chr11 (72528823-72528723) | |
| 163-263, gnl|loxAfr1|scaffold_59803 (7408-7529) | |
| 163-263, gnl|mm7|chr7 (97157086-97156965) | |
| 163-263, gnl|Mm7|chr7 (97156983-97157083) | |
| 163-263, gnl|monDom2|scaffold_74 (4827901-4827780) | |
| 163-263, gnl|oryCun1|scaffold_194973 (6243-6364) | |
| 163-263, gnl|panTro1|chr9 (73805088-73805209) | |
| 163-263, gnl|rheMac2|chr14 (71255695-71255816) | |
| 163-263, gnl|rn3|chr1 (158627948-158627827) | |
| 163-263, gnl|tetNig1|chr10 (9540891-9540785) | |
| 163-263, gnl|xenTro1|scaffold_262 (1418452-1418558) | |
| 377-530, gnl|bosTau2|chr15 (33673954-33674107) | |
| 377-530, gnl|Hg17|chr11 (72389836-72389683) | |
| 377-530, gnl|Mm7|chr7 (97232625-97232778) | |
| 831-972, gnl|bosTau2|chr15 (33742613-33742755) | |
| 831-972, gnl|canFam2|chr21 (28316608-28316463) | |
| 831-972, gnl|danRer3|chrUn (95906106-95906251) | |
| 831-972, gnl|dasNov1|scaffold_74853 (39851-40002) | |
| 831-972, gnl|echTel1|scaffold_177081 (4333-4183) | |
| 831-972, gnl|fr1|chrUn (202669210-202669361) | |
| 831-972, gnl|hg17|chr11 (72310517-72310669) | |
| 831-972, gnl|Hg17|chr11 (72310665-72310520) | |
| 831-972, gnl|loxAfr1|scaffold_1390 (51387-51235) | |
| 831-972, gnl|mm7|chr7 (97280246-97280094) | |
| 831-972, gnl|Mm7|chr7 (97280095-97280241) | |
| 831-972, gnl|monDom2|scaffold_74 (5062198-5062044) | |
| 831-972, gnl|oryCun1|scaffold_210920 (87780-87931) | |
| 831-972, gnl|panTro1|chr9 (73586480-73586632) | |
| 831-972, gnl|rheMac2|chr14 (71011823-71011973) | |
| 831-972, gnl|rn3|chr1 (158800629-158800481) | |
| 831-972, gnl|xenTro1|scaffold_262 (1371009-1371164) | |
| 1068-1186, gnl|bosTau2|chr15 (33770085-33770203) | |
| 1068-1186, gnl|canFam2|chr21 (28347835-28347681) | |
| 1068-1186, gnl|danRer3|chr10 (33037624-33037766) | |
| 1068-1186, gnl|dasNov1|scaffold_74853 (1982-2137) | |
| 1068-1186, gnl|fr1|chrUn (202666674-202666815) | |
| 1068-1186, gnl|hg17|chr11 (72278504-72278659) | |
| 1068-1186, gnl|Hg17|chr11 (72278638-72278520) | |
| 1068-1186, gnl|loxAfr1|scaffold_72043 (4854-4699) | |
| 1068-1186, gnl|mm7|chr7 (97296827-97296672) | |
| 1068-1186, gnl|Mm7|chr7 (97296691-97296809) | |
| 1068-1186, gnl|panTro1|chr9 (73554511-73554666) | |
| 1068-1186, gnl|rheMac2|chr14 (70979964-70980119) | |
| 1068-1186, gnl|rn3|chr1 (158816834-158816679) | |
| 1068-1186, gnl|tetNig1|chrUn_random (143646549-143646695) | |
| 1068-1186, gnl|xenTro1|scaffold_262 (1359823-1359965) | |
| 1288-1450, gnl|bosTau2|chr15 (33786773-33786935) | |
| 1288-1450, gnl|Hg17|chr11 (72256721-72256559) | |
| 1288-1450, gnl|Mm7|chr7 (97305856-97306018) | |
| 1452-1590, gnl|bosTau2|chr15 (33801951-33802089) | |
| 1452-1590, gnl|canFam2|chr21 (28389625-28389488) | |
| 1452-1590, gnl|danRer3|chr10 (33033470-33033589) | |
| 1452-1590, gnl|echTel1|scaffold_219245 (3253-3116) | |
| 1452-1590, gnl|fr1|chrUn (202662042-202662157) | |
| 1452-1590, gnl|galGal2|chr1 (187592819-187592676) | |
| 1452-1590, gnl|hg17|chr11 (72238441-72238578) | |
| 1452-1590, gnl|Hg17|chr11 (72238582-72238444) | |
| 1452-1590, gnl|loxAfr1|scaffold_1390 (96887-96750) | |
| 1452-1590, gnl|mm7|chr7 (97317959-97317822) | |
| 1452-1590, gnl|Mm7|chr7 (97317816-97317954) | |
| 1452-1590, gnl|monDom2|scaffold_74 (5160668-5160531) | |
| 1452-1590, gnl|oryCun1|scaffold_211550 (37111-36974) | |
| 1452-1590, gnl|panTro1|chr9 (73514402-73514539) | |
| 1452-1590, gnl|rheMac2|chr14 (70938213-70938350) | |
| 1452-1590, gnl|rn3|chr1 (158844329-158844192) | |
| 1452-1590, gnl|tetNig1|chr10 (9560899-9560768) | |
| 1452-1590, gnl|xenTro1|scaffold_262 (1354215-1354352) | |
| 1669-1848, gnl|bosTau2|chr15 (33807560-33807739) | |
| 1669-1848, gnl|canFam2|chr21 (28395756-28395638) | |
| 1669-1848, gnl|danRer3|chr10 (33030941-33031074) | |
| 1669-1848, gnl|echTel1|scaffold_71738 (1712-1594) | |
| 1669-1848, gnl|fr1|chrUn (202661604-202661722) | |
| 1669-1848, gnl|galGal2|chr1 (187593659-187593541) | |
| 1669-1848, gnl|hg17|chr11 (72231841-72231959) | |
| 1669-1848, gnl|Hg17|chr11 (72232023-72231844) | |
| 1669-1848, gnl|mm7|chr7 (97323254-97323136) | |
| 1669-1848, gnl|Mm7|chr7 (97323070-97323249) | |
| 1669-1848, gnl|monDom2|scaffold_74 (5163144-5163026) | |
| 1669-1848, gnl|oryCun1|scaffold_211550 (40994-40876) | |
| 1669-1848, gnl|panTro1|chr9 (73507770-73507888) | |
| 1669-1848, gnl|rheMac2|chr14 (70930550-70930668) | |
| 1669-1848, gnl|rn3|chr1 (158849740-158849622) | |
| 1669-1848, gnl|tetNig1|chr10 (9561559-9561441) | |
| 1669-1848, gnl|xenTro1|scaffold_262 (1352831-1352949) |