Ss1.1-Pig4-TMW8056J13.5
               |  | CTTTCTTTCAGCCTTGGTTGTGTAGGAGTTCTGTCAATTTCTAGTCGGATTCGTTAACCA
CTGCGCCACGACGGGAACTCCGGCCTTGGCATTCTTTAACTAAAAGTTATAGACGTGAAT
TATATAAGTTGGATCATACGAAGGAGCCTCTATAAGTACAAAATAAAAATAGACAGGGAG
AACCTAGGGTAAATTTAAAAGAGGAAACATTTTACATTTTTCTTCCAGAATGATAGAGAT
GATCAGACAGACTGTGTGAGTTTTAGGGGTCCAATAAATAGCACCCCTTCTTTTACACTT
GGATTTGGAATCAATGGGGAGAGTTAAAAAATGATGTTTGGGGACATGACTTTAGATCTT
CAGTTAAGCAGGCTTGCAAATACTCTGCTCCTGAATTTGAACTTCCCATGTAATCCAGAC
ATAGCTGAGGAATTGCACATCTCTCCATCCAGTTCATACAAGACACATGGCAAAGAGCAG
TCTGGAATGCATGCCCACCCCCTGCAGAAACACTGGCAGGCAGAGTGGAGTGGGGGAGAG
TGAGATATGCCCCAGTTTCTTCTTCCAATATCACCAATAAAATACATTAAATTTTCCTTC
CACATGGAGTGTTGAGTAAGAGGTAGGGAGAGAGGCCAGGTGTGTTTCTCTAGGGACGTC
CTTCCACACTGGAACATGAGGAATGAGGATTCAGAGTTCCCTTCAGGAGACTAAAGAGGA | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | CTTTCTTTCAGCCTTGGTTGTGTAGGAGTTCTGTCAATTTCTAGTCGGATTCGTTAACCA
CTGCGCCACGACGGGAACTCCGGCCTTGGCATTCTTTAACTAAAAGTTATAGACGTGAAT
TATATAAGTTGGATCATACGAAGGAGCCTCTATAAGTACAAAATAAAAATAGACAGGGAG
AACCTAGGGTAAATTTAAAAGAGGAAACATTTTACATTTTTCTTCCAGAATGATAGAGAT
GATCAGACAGACTGTGTGAGTTTTAGGGGTCCAATAAATAGCACCCCTTCTTTTACACTT
GGATTTGGAATCAATGGGGAGAGTTAAAAAATGATGTTTGGGGACATGACTTTAGATCTT
CAGTTAAGCAGGCTTGCAAATACTCTGCTCCTGAATTTGAACTTCCCATGTAATCCAGAC
ATAGCTGAGGAATTGCACATCTCTCCATCCAGTTCATACAAGACACATGGCAAAGAGCAG
TCTGGAATGCATGCCCACCCCCTGCAGAAACACTGGCAGGCAGAGTGGAGTGGGGGAGAG
TGAGATATGCCCCAGTTTCTTCTTCCAATATCACCAATAAAATACATTAAATTTTCCTTC
CACATGGAGTGTTGAGTAAGAGGTAGGGAGAGAGGCCAGGTGTGTTTCTCTAGGGACGTC
CTTCCACACTGGAACATGAGGAATGAGGATTCAGAGTTCCCTTCAGGAGACTAAAGAGGA | 
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map