Ss1.1-Pig4-TMW8058E08.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTATTGCCATGTATACTTACGAGAGCTCTGAGCAAGGCGATTTAACCTTTCAGCAAGGGG ATGTGATTTTGGTTACCAAGAAAGACGGTGACTGGTGGACAGGAACAGTGGGCGACAAGT CCGGAGTCTTCCCTTCTAACTATGTGAGGCTTAAAGATGCCGAGGGCTCTGGAACTGCTG GGAAAACAGGGAGTTTAGGAAAAAAACCTGAAATCGCCCAGGTTATTGCCTCCTACACGG CCACCGGTCCTGAGCAGCTCACCCTGGCCCCTGGTCAGCTGATTTTGATCCGCAAAAAGA ACCCGGGTGGATGGTGGGAAGGAGAGCTGCAAGCACGTGGGAAAAAGCGCCAGATCGGCT GGTTCCCTGCTAATTACGTCAAACTTTTAAGCCCGGGGACGAGCAAAATCACTCCAACAG AGCCCCCCAAGCCGACGGCATTCCCAGCAGTGTGCCAGGTGATCGGGATGTACGACTACA CCGCGCAGAACGACGACGAGCTGGCCTTCAACAAGGGCCAGGTCATCAACGTCCTCAACA AGGAAGACCCCGACTGGTGGAAGGGAGAAGTCCACGGCCAAGTGGGGCTCTTCCCGTCCA ACTACGTGAAGCTGACCACAGACATGGACCCCAGCCAGCAATGAATCATATGTTGTCCAT CCCCCCCTCAGGCTTGAAAGTCCTCAAAGAGACCCACTATCCCATATCACTGCCCAGAGG GATGATGGGAGATGCAGCCTTGATCATGTGACTTCCAGCATGATCACCTACTGCCTTCTG AGTAGAAGAACTCACTGCAGAGCAGTTTACCTCATTTTACCTTAGTTGCATGTGATAGCA ATGTTGAGTTATTACTTGCAGAGAAAGAAGCAAAAAAATTGCAAAAAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTATTGCCATGTATACTTACGAGAGCTCTGAGCAAGGCGATTTAACCTTTCAGCAAGGGG ATGTGATTTTGGTTACCAAGAAAGACGGTGACTGGTGGACAGGAACAGTGGGCGACAAGT CCGGAGTCTTCCCTTCTAACTATGTGAGGCTTAAAGATGCCGAGGGCTCTGGAACTGCTG GGAAAACAGGGAGTTTAGGAAAAAAACCTGAAATCGCCCAGGTTATTGCCTCCTACACGG CCACCGGTCCTGAGCAGCTCACCCTGGCCCCTGGTCAGCTGATTTTGATCCGCAAAAAGA ACCCGGGTGGATGGTGGGAAGGAGAGCTGCAAGCACGTGGGAAAAAGCGCCAGATCGGCT GGTTCCCTGCTAATTACGTCAAACTTTTAAGCCCGGGGACGAGCAAAATCACTCCAACAG AGCCCCCCAAGCCGACGGCATTCCCAGCAGTGTGCCAGGTGATCGGGATGTACGACTACA CCGCGCAGAACGACGACGAGCTGGCCTTCAACAAGGGCCAGGTCATCAACGTCCTCAACA AGGAAGACCCCGACTGGTGGAAGGGAGAAGTCCACGGCCAAGTGGGGCTCTTCCCGTCCA ACTACGTGAAGCTGACCACAGACATGGACCCCAGCCAGCAATGAATCATATGTTGTCCAT CCCCCCCTCAGGCTTGAAAGTCCTCAAAGAGACCCACTATCCCATATCACTGCCCAGAGG GATGATGGGAGATGCAGCCTTGATCATGTGACTTCCAGCATGATCACCTACTGCCTTCTG AGTAGAAGAACTCACTGCAGAGCAGTTTACCTCATTTTACCTTAGTTGCATGTGATAGCA ATGTTGAGTTATTACTTGCAGAGAAAGAAGCAAAAAAATTGCAAAAAT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 57 entry(ies) | More info |
| Aligned organism(s): 57 entry(ies) | Help | Less info |
| 1-165, gnl|bosTau2|chr1 (1616466-1616630) | |
| 1-165, gnl|Hg17|chr21 (34117664-34117828) | |
| 1-165, gnl|Mm7|chr16 (91908558-91908722) | |
| 207-331, gnl|bosTau2|chr1 (1622898-1623022) | |
| 207-331, gnl|canFam2|chr31 (31421523-31421697) | |
| 207-331, gnl|canFam2|chr31 (31421669-31421548) | |
| 207-331, gnl|danRer3|chr1 (48353850-48353712) | |
| 207-331, gnl|danRer3|chr1 (48353715-48353837) | |
| 207-331, gnl|dasNov1|scaffold_6927 (40538-40363) | |
| 207-331, gnl|dasNov1|scaffold_6927 (40392-40513) | |
| 207-331, gnl|echTel1|scaffold_293599 (87329-87504) | |
| 207-331, gnl|echTel1|scaffold_293599 (87475-87353) | |
| 207-331, gnl|fr1|chrUn (195210364-195210207) | |
| 207-331, gnl|fr1|chrUn (195210225-195210347) | |
| 207-331, gnl|galGal2|chr1 (99278841-99279011) | |
| 207-331, gnl|galGal2|chr1 (99278983-99278862) | |
| 207-331, gnl|hg17|chr21 (34123774-34123949) | |
| 207-331, gnl|Hg17|chr21 (34123794-34123918) | |
| 207-331, gnl|hg17|chr5 (10717913-10718035) | |
| 207-331, gnl|loxAfr1|scaffold_160 (38339-38163) | |
| 207-331, gnl|loxAfr1|scaffold_160 (38193-38314) | |
| 207-331, gnl|mm7|chr16 (91913579-91913753) | |
| 207-331, gnl|mm7|chr16 (91913725-91913603) | |
| 207-331, gnl|Mm7|chr16 (91913599-91913723) | |
| 207-331, gnl|monDom2|scaffold_29 (13893622-13893452) | |
| 207-331, gnl|monDom2|scaffold_29 (13893480-13893601) | |
| 207-331, gnl|oryCun1|scaffold_208433 (44135-43967) | |
| 207-331, gnl|oryCun1|scaffold_208433 (43993-44113) | |
| 207-331, gnl|panTro1|chr22 (34111929-34112104) | |
| 207-331, gnl|panTro1|chr4 (11120930-11121052) | |
| 207-331, gnl|rheMac2|chr3 (12738143-12737968) | |
| 207-331, gnl|rheMac2|chr3 (12738000-12738118) | |
| 207-331, gnl|rn3|chr11 (31896002-31896174) | |
| 207-331, gnl|rn3|chr11 (31896148-31896027) | |
| 207-331, gnl|tetNig1|chr17 (8596193-8596067) | |
| 207-331, gnl|tetNig1|chr17 (8596069-8596190) | |
| 207-331, gnl|xenTro1|scaffold_497 (944611-944775) | |
| 207-331, gnl|xenTro1|scaffold_497 (944757-944635) | |
| 440-643, gnl|bosTau2|chr11 (56231136-56231341) | |
| 440-643, gnl|canFam2|chr17 (21649199-21649407) | |
| 440-643, gnl|danRer3|chr20 (27341520-27341312) | |
| 440-643, gnl|dasNov1|scaffold_4542 (63585-63377) | |
| 440-643, gnl|echTel1|scaffold_310207 (83353-83145) | |
| 440-643, gnl|fr1|chrUn (195209458-195209666) | |
| 440-643, gnl|galGal2|chr3 (102450332-102450546) | |
| 440-643, gnl|hg17|chr2 (24380635-24380843) | |
| 440-643, gnl|Hg17|chr2 (24380853-24380648) | |
| 440-643, gnl|loxAfr1|scaffold_13549 (33105-33313) | |
| 440-643, gnl|mm7|chr12 (4606019-4605811) | |
| 440-643, gnl|Mm7|chr12 (4605799-4606004) | |
| 440-643, gnl|monDom2|scaffold_29 (13880402-13880608) | |
| 440-643, gnl|oryCun1|scaffold_200093 (97648-97856) | |
| 440-643, gnl|panTro1|chr12 (25259139-25259347) | |
| 440-643, gnl|rheMac2|chr13 (24162349-24162557) | |
| 440-643, gnl|rn3|chrUn (42880371-42880579) | |
| 440-643, gnl|tetNig1|chr14 (6086503-6086304) | |
| 440-643, gnl|xenTro1|scaffold_226 (429832-429630) |
| Aligned organism(s): 57 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-165, gnl|bosTau2|chr1 (1616466-1616630) | |
| 1-165, gnl|Hg17|chr21 (34117664-34117828) | |
| 1-165, gnl|Mm7|chr16 (91908558-91908722) | |
| 207-331, gnl|bosTau2|chr1 (1622898-1623022) | |
| 207-331, gnl|canFam2|chr31 (31421523-31421697) | |
| 207-331, gnl|canFam2|chr31 (31421669-31421548) | |
| 207-331, gnl|danRer3|chr1 (48353850-48353712) | |
| 207-331, gnl|danRer3|chr1 (48353715-48353837) | |
| 207-331, gnl|dasNov1|scaffold_6927 (40538-40363) | |
| 207-331, gnl|dasNov1|scaffold_6927 (40392-40513) | |
| 207-331, gnl|echTel1|scaffold_293599 (87329-87504) | |
| 207-331, gnl|echTel1|scaffold_293599 (87475-87353) | |
| 207-331, gnl|fr1|chrUn (195210364-195210207) | |
| 207-331, gnl|fr1|chrUn (195210225-195210347) | |
| 207-331, gnl|galGal2|chr1 (99278841-99279011) | |
| 207-331, gnl|galGal2|chr1 (99278983-99278862) | |
| 207-331, gnl|hg17|chr21 (34123774-34123949) | |
| 207-331, gnl|Hg17|chr21 (34123794-34123918) | |
| 207-331, gnl|hg17|chr5 (10717913-10718035) | |
| 207-331, gnl|loxAfr1|scaffold_160 (38339-38163) | |
| 207-331, gnl|loxAfr1|scaffold_160 (38193-38314) | |
| 207-331, gnl|mm7|chr16 (91913579-91913753) | |
| 207-331, gnl|mm7|chr16 (91913725-91913603) | |
| 207-331, gnl|Mm7|chr16 (91913599-91913723) | |
| 207-331, gnl|monDom2|scaffold_29 (13893622-13893452) | |
| 207-331, gnl|monDom2|scaffold_29 (13893480-13893601) | |
| 207-331, gnl|oryCun1|scaffold_208433 (44135-43967) | |
| 207-331, gnl|oryCun1|scaffold_208433 (43993-44113) | |
| 207-331, gnl|panTro1|chr22 (34111929-34112104) | |
| 207-331, gnl|panTro1|chr4 (11120930-11121052) | |
| 207-331, gnl|rheMac2|chr3 (12738143-12737968) | |
| 207-331, gnl|rheMac2|chr3 (12738000-12738118) | |
| 207-331, gnl|rn3|chr11 (31896002-31896174) | |
| 207-331, gnl|rn3|chr11 (31896148-31896027) | |
| 207-331, gnl|tetNig1|chr17 (8596193-8596067) | |
| 207-331, gnl|tetNig1|chr17 (8596069-8596190) | |
| 207-331, gnl|xenTro1|scaffold_497 (944611-944775) | |
| 207-331, gnl|xenTro1|scaffold_497 (944757-944635) | |
| 440-643, gnl|bosTau2|chr11 (56231136-56231341) | |
| 440-643, gnl|canFam2|chr17 (21649199-21649407) | |
| 440-643, gnl|danRer3|chr20 (27341520-27341312) | |
| 440-643, gnl|dasNov1|scaffold_4542 (63585-63377) | |
| 440-643, gnl|echTel1|scaffold_310207 (83353-83145) | |
| 440-643, gnl|fr1|chrUn (195209458-195209666) | |
| 440-643, gnl|galGal2|chr3 (102450332-102450546) | |
| 440-643, gnl|hg17|chr2 (24380635-24380843) | |
| 440-643, gnl|Hg17|chr2 (24380853-24380648) | |
| 440-643, gnl|loxAfr1|scaffold_13549 (33105-33313) | |
| 440-643, gnl|mm7|chr12 (4606019-4605811) | |
| 440-643, gnl|Mm7|chr12 (4605799-4606004) | |
| 440-643, gnl|monDom2|scaffold_29 (13880402-13880608) | |
| 440-643, gnl|oryCun1|scaffold_200093 (97648-97856) | |
| 440-643, gnl|panTro1|chr12 (25259139-25259347) | |
| 440-643, gnl|rheMac2|chr13 (24162349-24162557) | |
| 440-643, gnl|rn3|chrUn (42880371-42880579) | |
| 440-643, gnl|tetNig1|chr14 (6086503-6086304) | |
| 440-643, gnl|xenTro1|scaffold_226 (429832-429630) |