Non-Coding RNA Search

Ss1.1-Pig4-TMW8058I17.5

Sequence:


               
               GGCACATGGGGTGGCATATGATAAATGCTGTTTCATTCACTACTATATTCCAAAACATTT
GCTCTTCTAATTCTTTCATTGAAAAAGAAAAAAAGCAGTAAATGAGCTTGGAGAGAACAG
TACATTAAATGTTCTACATCTCTCTGTGTTTTGTAAACTTAGGTTTAAAGCAGAAGTCTA
CGTTAAATCACTTTAGAGATGGCTTGTACAGTGCTACTTTTTTTGTATGCCAGAGAGAAA
GTAACCAGGAATAGAAAAACTCAATTTTTCCAAATGAAGTGATAGAGCAGTTTTCACCAT
CAGAATTGAGTATGGATCTCTGAACTCTAGGGGGCTGTTTCCTACTTTCAGGCATTACTC
ATGAGATAATAATTGAAAAAACAATCCCACAATGTACTTTATTACCTCCAGAAACAGTGG
GGTGCATCCAGCCTTCACCTATCCCAATGGACCCACATGACCTGTAAGTAGAGTTGTTTT
TTGTAAGGAAGAATCATTCTCCTTTTATCTAACTGATACTGTGACGCAATGTTTAATCCT
GTGAGAGATCAGCTGGGTGACATTCTAGAGGAGAATTATCTTTGAGTTGGAAAGATTTAC
GACTCCAGCTTGCAAAAGTGGCAGAAAGCTTGGCAAGGGGAGAAGGAAATCATCTGTGAA
AGTTGTATTTGGCCATGTTAGATTCATTCAGGTAAGATTAAATACTGAATATATTTCACG
GAGTCTTCCAGATGAGAAATTTAACAAAGCGAAGAGACCACCCAGGCAGGAAATCGCCAA
CATTTACCTTTTAAAAATTGATTTATTTTGTTGTTGTTATCACTAAATTTGGAAGGGAGT
TGTTATTAAGTCAGAGCTTGATTAACAAAACCAGTATTTGCTGCTGATACTTCAAAGATG
TTCAACTGATCATTTATAGTCTTTTCTTGAAGTGTCACTTTACTTTTTAAGAATGTTACT
TCAAAATGTATCATTTTTAGTGATTTTTCCTTTAAGTTGTTCAGTCTATAGAATCAGAAT
AACCAAAGAGATATCTAAATAATCTTTGATTTCACACATGGGGAAACTAAGGCATGCACA
GTGCTTTCGTTTTATCTTAAGTCTTAAAAAAGCAAAATCGATTTACTGATGTTATAATTA
AAGACAAACTACCATAATTTTACCTTTCAAATAATTTATTTTTGTAGTTTTTTCCACATT
AATATTTAGTTTCATATAATTGTGTTTAGGAGTTCCCTCATGGCCTAGCTATTAAGGATT
TGGCATTGTCCCTGCTGGGTTTGATCTCTGGCCTGGGAACTTCTGCATGCCACTGGCACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCACATGGGGTGGCATATGATAAATGCTGTTTCATTCACTACTATATTCCAAAACATTT
GCTCTTCTAATTCTTTCATTGAAAAAGAAAAAAAGCAGTAAATGAGCTTGGAGAGAACAG
TACATTAAATGTTCTACATCTCTCTGTGTTTTGTAAACTTAGGTTTAAAGCAGAAGTCTA
CGTTAAATCACTTTAGAGATGGCTTGTACAGTGCTACTTTTTTTGTATGCCAGAGAGAAA
GTAACCAGGAATAGAAAAACTCAATTTTTCCAAATGAAGTGATAGAGCAGTTTTCACCAT
CAGAATTGAGTATGGATCTCTGAACTCTAGGGGGCTGTTTCCTACTTTCAGGCATTACTC
ATGAGATAATAATTGAAAAAACAATCCCACAATGTACTTTATTACCTCCAGAAACAGTGG
GGTGCATCCAGCCTTCACCTATCCCAATGGACCCACATGACCTGTAAGTAGAGTTGTTTT
TTGTAAGGAAGAATCATTCTCCTTTTATCTAACTGATACTGTGACGCAATGTTTAATCCT
GTGAGAGATCAGCTGGGTGACATTCTAGAGGAGAATTATCTTTGAGTTGGAAAGATTTAC
GACTCCAGCTTGCAAAAGTGGCAGAAAGCTTGGCAAGGGGAGAAGGAAATCATCTGTGAA
AGTTGTATTTGGCCATGTTAGATTCATTCAGGTAAGATTAAATACTGAATATATTTCACG
GAGTCTTCCAGATGAGAAATTTAACAAAGCGAAGAGACCACCCAGGCAGGAAATCGCCAA
CATTTACCTTTTAAAAATTGATTTATTTTGTTGTTGTTATCACTAAATTTGGAAGGGAGT
TGTTATTAAGTCAGAGCTTGATTAACAAAACCAGTATTTGCTGCTGATACTTCAAAGATG
TTCAACTGATCATTTATAGTCTTTTCTTGAAGTGTCACTTTACTTTTTAAGAATGTTACT
TCAAAATGTATCATTTTTAGTGATTTTTCCTTTAAGTTGTTCAGTCTATAGAATCAGAAT
AACCAAAGAGATATCTAAATAATCTTTGATTTCACACATGGGGAAACTAAGGCATGCACA
GTGCTTTCGTTTTATCTTAAGTCTTAAAAAAGCAAAATCGATTTACTGATGTTATAATTA
AAGACAAACTACCATAATTTTACCTTTCAAATAATTTATTTTTGTAGTTTTTTCCACATT
AATATTTAGTTTCATATAATTGTGTTTAGGAGTTCCCTCATGGCCTAGCTATTAAGGATT
TGGCATTGTCCCTGCTGGGTTTGATCTCTGGCCTGGGAACTTCTGCATGCCACTGGCACA

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

Help | Less info


               
               107-336, gnl|bosTau2|chr28 (34128386-34128156)
               

               
               107-336, gnl|Hg17|chr10 (50715570-50715328)
               


               
               357-1233, gnl|bosTau2|chr28 (34127775-34126868)
               

               
               357-1233, gnl|Hg17|chr10 (50715306-50714494)

Aligned organism(s): 4 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               107-336, gnl|bosTau2|chr28 (34128386-34128156)
               

               
               107-336, gnl|Hg17|chr10 (50715570-50715328)
               


               
               357-1233, gnl|bosTau2|chr28 (34127775-34126868)
               

               
               357-1233, gnl|Hg17|chr10 (50715306-50714494)

	107-336, gnl\|bosTau2\|chr28 (34128386-34128156)
	107-336, gnl\|Hg17\|chr10 (50715570-50715328)

	357-1233, gnl\|bosTau2\|chr28 (34127775-34126868)
	357-1233, gnl\|Hg17\|chr10 (50715306-50714494)