Non-Coding RNA Search

Ss1.1-Pig4-TMW8059H10.3

Sequence:


               
               CGTCAGTCAAATTATTTCTTAAATTGCTTTTCTCTTAAATTAAGCATTTTATTGGTTGTG
TTGGGTATCAAAGGAAATTGCTCTGTTTAATGCTGCATTATTAAAGAGAGCAAGTTGTTA
ATTTGTGGAGTGGGGGAAAGGTTCTGCAAGTTGCCATTGTACAAATCCATTTTTACAAAT
GTTTGCAGCAGATTCCACAGAACAAAGGGCCCATTCATCGGCCGAGAGCCCTGCAGAATC
TCTGAGCCAAGTGGCCGTGTGTTCCGAGCCGGAGCCTGACCTGTAGACCGCCTTTAATGT
CTTCTGCACCCAGTCCTTTTATGACATGGGCTTTTTTTAAACAGGGTAAAGTGACTGTGT
TGCGTCGCAAACTCAGGTATTATGAGAGGAAGGTAGGAGTATAGCTAGCAGTGTGGAGAC
ATTAGGTCAGCCACTAGATGTATTTGTGAATTCAGTTTGAAGGACACAGAGAAAGGTTGG
AGGGGGGAGGTTTGGTGTGTTTGTTTTCTGCCTTTCTTCCCATAATGTTTGGTTAACAGG
TAGCCTTTTTGCTAGTGGGAAAGAAAAAAGTTGTGCATGTTGTCTCTAATCCCCCTCTCT
TCTGTCCTCTCTCTGTCACCAACAGCACCCACTTTGAGAATTTTTCCACCATAAAAACAA
GACCCTGAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGTCAGTCAAATTATTTCTTAAATTGCTTTTCTCTTAAATTAAGCATTTTATTGGTTGTG
TTGGGTATCAAAGGAAATTGCTCTGTTTAATGCTGCATTATTAAAGAGAGCAAGTTGTTA
ATTTGTGGAGTGGGGGAAAGGTTCTGCAAGTTGCCATTGTACAAATCCATTTTTACAAAT
GTTTGCAGCAGATTCCACAGAACAAAGGGCCCATTCATCGGCCGAGAGCCCTGCAGAATC
TCTGAGCCAAGTGGCCGTGTGTTCCGAGCCGGAGCCTGACCTGTAGACCGCCTTTAATGT
CTTCTGCACCCAGTCCTTTTATGACATGGGCTTTTTTTAAACAGGGTAAAGTGACTGTGT
TGCGTCGCAAACTCAGGTATTATGAGAGGAAGGTAGGAGTATAGCTAGCAGTGTGGAGAC
ATTAGGTCAGCCACTAGATGTATTTGTGAATTCAGTTTGAAGGACACAGAGAAAGGTTGG
AGGGGGGAGGTTTGGTGTGTTTGTTTTCTGCCTTTCTTCCCATAATGTTTGGTTAACAGG
TAGCCTTTTTGCTAGTGGGAAAGAAAAAAGTTGTGCATGTTGTCTCTAATCCCCCTCTCT
TCTGTCCTCTCTCTGTCACCAACAGCACCCACTTTGAGAATTTTTCCACCATAAAAACAA
GACCCTGAAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               352-590, + strand, RNAz p=0.750128

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               352-590, + strand, RNAz p=0.750128

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               72-670, gnl|bosTau2|chr11 (72847074-72846469)
               

               
               72-670, gnl|Hg17|chr9 (124362337-124361413)
               

               
               72-670, gnl|Mm7|chr2 (38733116-38732503)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               72-670, gnl|bosTau2|chr11 (72847074-72846469)
               

               
               72-670, gnl|Hg17|chr9 (124362337-124361413)
               

               
               72-670, gnl|Mm7|chr2 (38733116-38732503)

	72-670, gnl\|bosTau2\|chr11 (72847074-72846469)
	72-670, gnl\|Hg17\|chr9 (124362337-124361413)
	72-670, gnl\|Mm7\|chr2 (38733116-38732503)