Ss1.1-Pig4-TMW8059J23.3
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CTTTCTCCCTTCCGTACAGTACCCAGATGCCCTGCACCATCATGAAGTGTTCACTTAGTA
CCTGCGTTGTGTTGGGGATACTGATGGGACCATTTGGCCTTGTCCTCCAGGAATTTATAT
AGTAAAGCTTCCATCAAACAGCCCTGGTTCTGTCCTTGAGTAGTTTCTCCTACCTCACAT
CAGTGCTTACCAACTTTTAGCAACAGCAGGCTCCAAATGTATCCTCACATCTATTACACT
ACACACAGGCAGTTCTCGTCTTAGGGACCTTGAATGACAGGATTAGGGTGATGACACGAA
ATTACTATCTAACATCATATATTTTATTTTGCTTACTGTGACCCCTCCTCCCTTCTTAGA
ATGTAAGCTCCAGGAGTTCAGGAATTGCCTCTTGTTTGTTGCTGTAGCCTTAACTCCTAA
AACAGTGCTTGGTGCATGGCTAGCACAAATATACATTTGTTGGATGATGATGGCATTACT
GAATTCTTTTTCCCACTATGTCCAGCAGCATTAATTTGCGTGGCTCTATGAAGGATTGTT
TTCACTCATTTATTATTTTTTTTCAAGGAACATGTTGGTCTCTCACCACATGCCAATCCT
TAAGTGCCGTTGGTGAAGAGTATACCTTAGAGAAATGATGTTACAGGGTTTATGATCTAG
TCTATGCCAAGAAGAAAAATGAAGTTGAATCTTTTGTAGGTTAAGTTCCAAACCAAATAG
ATGAACAAGTAAGATAGAGTTCACCTGGGTTTTGTTTTGTTTTTGCTGAGACTTCCTAGA
GAACCTGTCCCAGAGCAGGGGTGAGAGTGCTAGCAGGATGGCACAGGACATAGGCAGCCT
CCAGGTGCTGAAGGGAGGGGGACACTGCCAGGCCCTTGCCTCAGGTGGAGGAGTTGGTTG
GGTTTGTCACCTCCCTTCCAAGGCAGTATCACAGTGGTGAGAGCACTTGGACACTTTAGC
CAGATTGTTTGGGCTCAGGTCCCTCCCCAGCTATGTGACCTTGGGCAAGATCTTTAATCT
CTGTGTTAATCTCGGTTTTCTCTCTGTGAAATAGGGATAGCTGTATTACCTCCTTTATTG
TGGGCCTTAAATGAGTTATCACGTGTGAGACTCTTTGAATAGTACCTGGGACTGAGATAG
CTATTTGCTGCTATAAACTTTACTGCTAGCATTTTTATCTCATGTGGT
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Blue-coloured subsequences are predicted RNA structures by RNAz
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CTTTCTCCCTTCCGTACAGTACCCAGATGCCCTGCACCATCATGAAGTGTTCACTTAGTA
CCTGCGTTGTGTTGGGGATACTGATGGGACCATTTGGCCTTGTCCTCCAGGAATTTATAT
AGTAAAGCTTCCATCAAACAGCCCTGGTTCTGTCCTTGAGTAGTTTCTCCTACCTCACAT
CAGTGCTTACCAACTTTTAGCAACAGCAGGCTCCAAATGTATCCTCACATCTATTACACT
ACACACAGGCAGTTCTCGTCTTAGGGACCTTGAATGACAGGATTAGGGTGATGACACGAA
ATTACTATCTAACATCATATATTTTATTTTGCTTACTGTGACCCCTCCTCCCTTCTTAGA
ATGTAAGCTCCAGGAGTTCAGGAATTGCCTCTTGTTTGTTGCTGTAGCCTTAACTCCTAA
AACAGTGCTTGGTGCATGGCTAGCACAAATATACATTTGTTGGATGATGATGGCATTACT
GAATTCTTTTTCCCACTATGTCCAGCAGCATTAATTTGCGTGGCTCTATGAAGGATTGTT
TTCACTCATTTATTATTTTTTTTCAAGGAACATGTTGGTCTCTCACCACATGCCAATCCT
TAAGTGCCGTTGGTGAAGAGTATACCTTAGAGAAATGATGTTACAGGGTTTATGATCTAG
TCTATGCCAAGAAGAAAAATGAAGTTGAATCTTTTGTAGGTTAAGTTCCAAACCAAATAG
ATGAACAAGTAAGATAGAGTTCACCTGGGTTTTGTTTTGTTTTTGCTGAGACTTCCTAGA
GAACCTGTCCCAGAGCAGGGGTGAGAGTGCTAGCAGGATGGCACAGGACATAGGCAGCCT
CCAGGTGCTGAAGGGAGGGGGACACTGCCAGGCCCTTGCCTCAGGTGGAGGAGTTGGTTG
GGTTTGTCACCTCCCTTCCAAGGCAGTATCACAGTGGTGAGAGCACTTGGACACTTTAGC
CAGATTGTTTGGGCTCAGGTCCCTCCCCAGCTATGTGACCTTGGGCAAGATCTTTAATCT
CTGTGTTAATCTCGGTTTTCTCTCTGTGAAATAGGGATAGCTGTATTACCTCCTTTATTG
TGGGCCTTAAATGAGTTATCACGTGTGAGACTCTTTGAATAGTACCTGGGACTGAGATAG
CTATTTGCTGCTATAAACTTTACTGCTAGCATTTTTATCTCATGTGGT
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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4-950, gnl|bosTau2|chr13 (45138327-45139267) |
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962-1167, gnl|bosTau2|chr13 (45139257-45139465) |
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962-1167, gnl|canFam2|chr24 (27280244-27280477) |
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962-1167, gnl|hg17|chr20 (33379555-33379845) |
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962-1167, gnl|Hg17|chr20 (33379848-33379609) |
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962-1167, gnl|loxAfr1|scaffold_24890 (41065-40814) |
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962-1167, gnl|mm7|chr2 (155610474-155610673) |
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962-1167, gnl|Mm7|chr2 (155610660-155610456) |
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962-1167, gnl|panTro1|chr21_random (10164899-10164609) |
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962-1167, gnl|rheMac2|chr10 (29216831-29216563) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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4-950, gnl|bosTau2|chr13 (45138327-45139267) |
| |
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962-1167, gnl|bosTau2|chr13 (45139257-45139465) |
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962-1167, gnl|canFam2|chr24 (27280244-27280477) |
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962-1167, gnl|hg17|chr20 (33379555-33379845) |
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962-1167, gnl|Hg17|chr20 (33379848-33379609) |
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962-1167, gnl|loxAfr1|scaffold_24890 (41065-40814) |
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962-1167, gnl|mm7|chr2 (155610474-155610673) |
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962-1167, gnl|Mm7|chr2 (155610660-155610456) |
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962-1167, gnl|panTro1|chr21_random (10164899-10164609) |
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962-1167, gnl|rheMac2|chr10 (29216831-29216563) |
