Non-Coding RNA Search

Ss1.1-Pig4-TMW8060B18.5

Sequence:


               
               GTTTTCTCCCCATTTTATGTTACATGTATTGGGTCTTTTGTTTGTTTTTCCTTTTTGGCT
ACCCTGTGGCGTATGGAGTTCTCAGGCCAGAGATCAGATCCAAGCCACTATTGCAACCTA
AGTCACAGCTGTGGCAACACCAGATCCTTAACCCACTGTGCTGGGCTGGGGATCAAACCT
GTGTCCTAGTGCTCCCAAGACACCATTGAGTCCCGTTCTGCCGCAGCGCGGAACTCTTAT
ATGTATTGTTTTGAGCACAATTTAAAAAAAATAAATAAATCAAGGTGGGGGAGAAACTAG
TGACTAAGAAATTTGTGAGTGAAAATTAGGACTGGTTGTAGGGGTTGGTTGTGCAAAGAA
GGTGGTGAGGAGCGTGGTGCAGCGTTTCTGACCAGGTGTATCAGTTTCCCACGGCTAGGG
GTTGAATCGGAGCTGCACCCGACGGCCTACATTCCAAACATCACATCGGCATGATCATCA
GCCCGCATCTTGAGTTGAGGAAAAGAATTGCTTCCTCAACTACAAGGTGTCCTGTATCCT
GACCATGCCGCAGTACATGAGACAGGGCTATGGCAAGATGCTCATTGATTTCAGTAAGTG
AAACAGCCAGGTCCTAAGTTCCAC------------TGCGAATATGGTTGATTGCATGTT
TGTCCTGAGCTCATGACAGAACCTGCCATGTACCGGAATTACACTGGTAATAAGTGAATG
AGTAAGTAGAGAAATCTGAATGTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTTCTCCCCATTTTATGTTACATGTATTGGGTCTTTTGTTTGTTTTTCCTTTTTGGCT
ACCCTGTGGCGTATGGAGTTCTCAGGCCAGAGATCAGATCCAAGCCACTATTGCAACCTA
AGTCACAGCTGTGGCAACACCAGATCCTTAACCCACTGTGCTGGGCTGGGGATCAAACCT
GTGTCCTAGTGCTCCCAAGACACCATTGAGTCCCGTTCTGCCGCAGCGCGGAACTCTTAT
ATGTATTGTTTTGAGCACAATTTAAAAAAAATAAATAAATCAAGGTGGGGGAGAAACTAG
TGACTAAGAAATTTGTGAGTGAAAATTAGGACTGGTTGTAGGGGTTGGTTGTGCAAAGAA
GGTGGTGAGGAGCGTGGTGCAGCGTTTCTGACCAGGTGTATCAGTTTCCCACGGCTAGGG
GTTGAATCGGAGCTGCACCCGACGGCCTACATTCCAAACATCACATCGGCATGATCATCA
GCCCGCATCTTGAGTTGAGGAAAAGAATTGCTTCCTCAACTACAAGGTGTCCTGTATCCT
GACCATGCCGCAGTACATGAGACAGGGCTATGGCAAGATGCTCATTGATTTCAGTAAGTG
AAACAGCCAGGTCCTAAGTTCCAC------------TGCGAATATGGTTGATTGCATGTT
TGTCCTGAGCTCATGACAGAACCTGCCATGTACCGGAATTACACTGGTAATAAGTGAATG
AGTAAGTAGAGAAATCTGAATGTT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|47179432|emb|CAG13470.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|47179432|emb|CAG13470.1|

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               244-415, gnl|bosTau2|chr17 (22454592-22454422)
               


               
               475-728, gnl|bosTau2|chr19 (29558354-29558095)
               

               
               475-728, gnl|Hg17|chr17 (45255539-45255806)
               

               
               475-728, gnl|Mm7|chr11 (95389552-95389297)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               244-415, gnl|bosTau2|chr17 (22454592-22454422)
               


               
               475-728, gnl|bosTau2|chr19 (29558354-29558095)
               

               
               475-728, gnl|Hg17|chr17 (45255539-45255806)
               

               
               475-728, gnl|Mm7|chr11 (95389552-95389297)

	244-415, gnl\|bosTau2\|chr17 (22454592-22454422)

	475-728, gnl\|bosTau2\|chr19 (29558354-29558095)
	475-728, gnl\|Hg17\|chr17 (45255539-45255806)
	475-728, gnl\|Mm7\|chr11 (95389552-95389297)