Ss1.1-Pig4-TMW8061F24.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGCAACAGGTACAACAGCTACAGGTCTTGTTGCTACAAGCCCATGGAGGTACCCTGCCTG GATCTATAAATGTGGAACCATCAGAGAATCTACAATCCTTAATGGAAAAGAATCAGTCCC TGGTAGAGGAGAATGAAAAATTAAGTCGTGGTCTAAGTGAAGCTGCTGGTCAGACAGCCC AGATGCTGGAGAGGATCATTTTGACAGAACAAGCAAATGAAAAAATGAACGCCAAGCTAG AAGAGCTCAGGCAGCATGCAGCCTGCAAAGTGGATCTTCAAAAGCTAGTGGAGACTTTGG AAGACCAGGAATTAAAAGAAAATGTAGAGATAATTCGTAACCTGCAGCAAGTGATTACCC AGCTATCGGATGAAACTGTTGCTTGCATGGCTGCAGCCATCGATATTGCAGTGGAACCAG AAGCTCAAGTGGAAATCAGTCCAGAGAGCAGCAGGTCTTCTGATGCTTTCACCACTCAGC ATGCTCTACGTTAAGCTCAGATGTCTAAGGAGCTGGTTGAGTTGAATAAAGCCCTTGCAC TGAAAGAGGCCCTAGCCAAGAAAATGACTCAGAATGACAGCCAGCTGCAGCCCATCCAGT TCCAGTACCAGGATAACATAAAAAATCTAGAATTGGAAGTCATCAACC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGCAACAGGTACAACAGCTACAGGTCTTGTTGCTACAAGCCCATGGAGGTACCCTGCCTG GATCTATAAATGTGGAACCATCAGAGAATCTACAATCCTTAATGGAAAAGAATCAGTCCC TGGTAGAGGAGAATGAAAAATTAAGTCGTGGTCTAAGTGAAGCTGCTGGTCAGACAGCCC AGATGCTGGAGAGGATCATTTTGACAGAACAAGCAAATGAAAAAATGAACGCCAAGCTAG AAGAGCTCAGGCAGCATGCAGCCTGCAAAGTGGATCTTCAAAAGCTAGTGGAGACTTTGG AAGACCAGGAATTAAAAGAAAATGTAGAGATAATTCGTAACCTGCAGCAAGTGATTACCC AGCTATCGGATGAAACTGTTGCTTGCATGGCTGCAGCCATCGATATTGCAGTGGAACCAG AAGCTCAAGTGGAAATCAGTCCAGAGAGCAGCAGGTCTTCTGATGCTTTCACCACTCAGC ATGCTCTACGTTAAGCTCAGATGTCTAAGGAGCTGGTTGAGTTGAATAAAGCCCTTGCAC TGAAAGAGGCCCTAGCCAAGAAAATGACTCAGAATGACAGCCAGCTGCAGCCCATCCAGT TCCAGTACCAGGATAACATAAAAAATCTAGAATTGGAAGTCATCAACC |
| Aligned organism(s): 100 entry(ies) | More info |
| Aligned organism(s): 100 entry(ies) | Help | Less info |
| 71-203, gnl|bosTau2|chrX (20534308-20534176) | |
| 71-203, gnl|canFam2|chrX (57723789-57723910) | |
| 71-203, gnl|canFam2|chrX (57723800-57723931) | |
| 71-203, gnl|danRer3|chr21 (40120822-40120704) | |
| 71-203, gnl|dasNov1|scaffold_233953 (461-582) | |
| 71-203, gnl|dasNov1|scaffold_74119 (4888-5019) | |
| 71-203, gnl|echTel1|scaffold_270543 (893-772) | |
| 71-203, gnl|echTel1|scaffold_270543 (882-751) | |
| 71-203, gnl|fr1|chrUn (5764104-5763984) | |
| 71-203, gnl|fr1|chrUn (5764094-5763963) | |
| 71-203, gnl|galGal2|chr4 (508584-508472) | |
| 71-203, gnl|galGal2|chr4 (508578-508451) | |
| 71-203, gnl|hg17|chr5 (154374747-154374878) | |
| 71-203, gnl|hg17|chrX (69344660-69344781) | |
| 71-203, gnl|Hg17|chrX (69344670-69344802) | |
| 71-203, gnl|loxAfr1|scaffold_43841 (5023-5144) | |
| 71-203, gnl|loxAfr1|scaffold_43841 (5034-5165) | |
| 71-203, gnl|mm7|chr12 (98642103-98642234) | |
| 71-203, gnl|mm7|chrX (96004632-96004753) | |
| 71-203, gnl|Mm7|chrX (96004642-96004774) | |
| 71-203, gnl|monDom2|scaffold_188 (652512-652631) | |
| 71-203, gnl|monDom2|scaffold_188 (652521-652652) | |
| 71-203, gnl|oryCun1|scaffold_117333 (14625-14507) | |
| 71-203, gnl|panTro1|chr4 (161326301-161326411) | |
| 71-203, gnl|panTro1|chr4 (161326301-161326432) | |
| 71-203, gnl|rheMac2|chr6 (151384061-151384192) | |
| 71-203, gnl|rheMac2|chrX (69323678-69323799) | |
| 71-203, gnl|rn3|chr6 (125421684-125421815) | |
| 71-203, gnl|rn3|chrX (88748141-88748262) | |
| 71-203, gnl|tetNig1|chr7 (6929198-6929319) | |
| 71-203, gnl|tetNig1|chr7 (6929211-6929340) | |
| 71-203, gnl|xenTro1|scaffold_482 (886805-886683) | |
| 71-203, gnl|xenTro1|scaffold_482 (886789-886662) | |
| 263-369, gnl|bosTau2|chrX (20532422-20532316) | |
| 263-369, gnl|canFam2|chrX (57726143-57726266) | |
| 263-369, gnl|canFam2|chrX (57726156-57726216) | |
| 263-369, gnl|danRer3|chr21 (40116910-40116796) | |
| 263-369, gnl|danRer3|chr21 (40116897-40116841) | |
| 263-369, gnl|dasNov1|scaffold_74119 (5080-5184) | |
| 263-369, gnl|dasNov1|scaffold_74119 (5082-5148) | |
| 263-369, gnl|echTel1|scaffold_303950 (44031-43908) | |
| 263-369, gnl|fr1|chrUn (5763694-5763579) | |
| 263-369, gnl|fr1|chrUn (5763682-5763626) | |
| 263-369, gnl|galGal2|chr4 (507690-507567) | |
| 263-369, gnl|galGal2|chr4 (507680-507618) | |
| 263-369, gnl|hg17|chrX (69346740-69346863) | |
| 263-369, gnl|hg17|chrX (78386778-78386844) | |
| 263-369, gnl|Hg17|chrX (69346748-69346854) | |
| 263-369, gnl|loxAfr1|scaffold_43841 (6943-7066) | |
| 263-369, gnl|loxAfr1|scaffold_43841 (6956-7020) | |
| 263-369, gnl|mm7|chr12 (98642297-98642359) | |
| 263-369, gnl|mm7|chrX (96007355-96007479) | |
| 263-369, gnl|Mm7|chrX (96007364-96007470) | |
| 263-369, gnl|monDom2|scaffold_188 (654085-654208) | |
| 263-369, gnl|oryCun1|scaffold_117333 (12139-12016) | |
| 263-369, gnl|oryCun1|scaffold_117333 (12126-12062) | |
| 263-369, gnl|panTro1|chrX (71417759-71417882) | |
| 263-369, gnl|panTro1|chrX (80859005-80859069) | |
| 263-369, gnl|rheMac2|chrX (69325733-69325856) | |
| 263-369, gnl|rheMac2|chrX (78197550-78197610) | |
| 263-369, gnl|rn3|chr6 (125421878-125421940) | |
| 263-369, gnl|rn3|chrX (88750935-88751053) | |
| 263-369, gnl|tetNig1|chr7 (6929649-6929772) | |
| 263-369, gnl|xenTro1|scaffold_1810 (58550-58619) | |
| 263-369, gnl|xenTro1|scaffold_482 (885839-885724) | |
| 426-616, gnl|bosTau2|chrX (20526320-20526130) | |
| 426-616, gnl|canFam2|chrX (57731473-57731692) | |
| 426-616, gnl|canFam2|chrX (57731494-57731677) | |
| 426-616, gnl|danRer3|chr21 (40114322-40114118) | |
| 426-616, gnl|danRer3|chr21 (40114293-40114124) | |
| 426-616, gnl|dasNov1|scaffold_74119 (5243-5434) | |
| 426-616, gnl|dasNov1|scaffold_74119 (5243-5426) | |
| 426-616, gnl|echTel1|scaffold_314543 (79306-79088) | |
| 426-616, gnl|echTel1|scaffold_314543 (79285-79102) | |
| 426-616, gnl|fr1|chrUn (5763343-5763126) | |
| 426-616, gnl|fr1|chrUn (5763294-5763141) | |
| 426-616, gnl|galGal2|chr4 (506527-506310) | |
| 426-616, gnl|galGal2|chr4 (506505-506324) | |
| 426-616, gnl|hg17|chr5 (154375102-154375285) | |
| 426-616, gnl|hg17|chrX (69356472-69356692) | |
| 426-616, gnl|Hg17|chrX (69356493-69356683) | |
| 426-616, gnl|loxAfr1|scaffold_63102 (5293-5512) | |
| 426-616, gnl|loxAfr1|scaffold_63102 (5314-5495) | |
| 426-616, gnl|mm7|chr12 (98642440-98642623) | |
| 426-616, gnl|mm7|chrX (96017851-96018075) | |
| 426-616, gnl|Mm7|chrX (96017869-96018059) | |
| 426-616, gnl|monDom2|scaffold_188 (661809-662033) | |
| 426-616, gnl|monDom2|scaffold_188 (661830-662013) | |
| 426-616, gnl|oryCun1|scaffold_117333 (4101-3882) | |
| 426-616, gnl|oryCun1|scaffold_117333 (4080-3897) | |
| 426-616, gnl|panTro1|chr4 (161326656-161326839) | |
| 426-616, gnl|panTro1|chrX (71427833-71428053) | |
| 426-616, gnl|rheMac2|chr6 (151384416-151384599) | |
| 426-616, gnl|rheMac2|chrX (69333172-69333393) | |
| 426-616, gnl|rn3|chr6 (125422027-125422210) | |
| 426-616, gnl|rn3|chrX (88757850-88758073) | |
| 426-616, gnl|tetNig1|chr7 (6930202-6930404) | |
| 426-616, gnl|tetNig1|chr7 (6930237-6930397) | |
| 426-616, gnl|xenTro1|scaffold_482 (884039-883839) | |
| 426-616, gnl|xenTro1|scaffold_482 (884012-883844) |
| Aligned organism(s): 100 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 71-203, gnl|bosTau2|chrX (20534308-20534176) | |
| 71-203, gnl|canFam2|chrX (57723789-57723910) | |
| 71-203, gnl|canFam2|chrX (57723800-57723931) | |
| 71-203, gnl|danRer3|chr21 (40120822-40120704) | |
| 71-203, gnl|dasNov1|scaffold_233953 (461-582) | |
| 71-203, gnl|dasNov1|scaffold_74119 (4888-5019) | |
| 71-203, gnl|echTel1|scaffold_270543 (893-772) | |
| 71-203, gnl|echTel1|scaffold_270543 (882-751) | |
| 71-203, gnl|fr1|chrUn (5764104-5763984) | |
| 71-203, gnl|fr1|chrUn (5764094-5763963) | |
| 71-203, gnl|galGal2|chr4 (508584-508472) | |
| 71-203, gnl|galGal2|chr4 (508578-508451) | |
| 71-203, gnl|hg17|chr5 (154374747-154374878) | |
| 71-203, gnl|hg17|chrX (69344660-69344781) | |
| 71-203, gnl|Hg17|chrX (69344670-69344802) | |
| 71-203, gnl|loxAfr1|scaffold_43841 (5023-5144) | |
| 71-203, gnl|loxAfr1|scaffold_43841 (5034-5165) | |
| 71-203, gnl|mm7|chr12 (98642103-98642234) | |
| 71-203, gnl|mm7|chrX (96004632-96004753) | |
| 71-203, gnl|Mm7|chrX (96004642-96004774) | |
| 71-203, gnl|monDom2|scaffold_188 (652512-652631) | |
| 71-203, gnl|monDom2|scaffold_188 (652521-652652) | |
| 71-203, gnl|oryCun1|scaffold_117333 (14625-14507) | |
| 71-203, gnl|panTro1|chr4 (161326301-161326411) | |
| 71-203, gnl|panTro1|chr4 (161326301-161326432) | |
| 71-203, gnl|rheMac2|chr6 (151384061-151384192) | |
| 71-203, gnl|rheMac2|chrX (69323678-69323799) | |
| 71-203, gnl|rn3|chr6 (125421684-125421815) | |
| 71-203, gnl|rn3|chrX (88748141-88748262) | |
| 71-203, gnl|tetNig1|chr7 (6929198-6929319) | |
| 71-203, gnl|tetNig1|chr7 (6929211-6929340) | |
| 71-203, gnl|xenTro1|scaffold_482 (886805-886683) | |
| 71-203, gnl|xenTro1|scaffold_482 (886789-886662) | |
| 263-369, gnl|bosTau2|chrX (20532422-20532316) | |
| 263-369, gnl|canFam2|chrX (57726143-57726266) | |
| 263-369, gnl|canFam2|chrX (57726156-57726216) | |
| 263-369, gnl|danRer3|chr21 (40116910-40116796) | |
| 263-369, gnl|danRer3|chr21 (40116897-40116841) | |
| 263-369, gnl|dasNov1|scaffold_74119 (5080-5184) | |
| 263-369, gnl|dasNov1|scaffold_74119 (5082-5148) | |
| 263-369, gnl|echTel1|scaffold_303950 (44031-43908) | |
| 263-369, gnl|fr1|chrUn (5763694-5763579) | |
| 263-369, gnl|fr1|chrUn (5763682-5763626) | |
| 263-369, gnl|galGal2|chr4 (507690-507567) | |
| 263-369, gnl|galGal2|chr4 (507680-507618) | |
| 263-369, gnl|hg17|chrX (69346740-69346863) | |
| 263-369, gnl|hg17|chrX (78386778-78386844) | |
| 263-369, gnl|Hg17|chrX (69346748-69346854) | |
| 263-369, gnl|loxAfr1|scaffold_43841 (6943-7066) | |
| 263-369, gnl|loxAfr1|scaffold_43841 (6956-7020) | |
| 263-369, gnl|mm7|chr12 (98642297-98642359) | |
| 263-369, gnl|mm7|chrX (96007355-96007479) | |
| 263-369, gnl|Mm7|chrX (96007364-96007470) | |
| 263-369, gnl|monDom2|scaffold_188 (654085-654208) | |
| 263-369, gnl|oryCun1|scaffold_117333 (12139-12016) | |
| 263-369, gnl|oryCun1|scaffold_117333 (12126-12062) | |
| 263-369, gnl|panTro1|chrX (71417759-71417882) | |
| 263-369, gnl|panTro1|chrX (80859005-80859069) | |
| 263-369, gnl|rheMac2|chrX (69325733-69325856) | |
| 263-369, gnl|rheMac2|chrX (78197550-78197610) | |
| 263-369, gnl|rn3|chr6 (125421878-125421940) | |
| 263-369, gnl|rn3|chrX (88750935-88751053) | |
| 263-369, gnl|tetNig1|chr7 (6929649-6929772) | |
| 263-369, gnl|xenTro1|scaffold_1810 (58550-58619) | |
| 263-369, gnl|xenTro1|scaffold_482 (885839-885724) | |
| 426-616, gnl|bosTau2|chrX (20526320-20526130) | |
| 426-616, gnl|canFam2|chrX (57731473-57731692) | |
| 426-616, gnl|canFam2|chrX (57731494-57731677) | |
| 426-616, gnl|danRer3|chr21 (40114322-40114118) | |
| 426-616, gnl|danRer3|chr21 (40114293-40114124) | |
| 426-616, gnl|dasNov1|scaffold_74119 (5243-5434) | |
| 426-616, gnl|dasNov1|scaffold_74119 (5243-5426) | |
| 426-616, gnl|echTel1|scaffold_314543 (79306-79088) | |
| 426-616, gnl|echTel1|scaffold_314543 (79285-79102) | |
| 426-616, gnl|fr1|chrUn (5763343-5763126) | |
| 426-616, gnl|fr1|chrUn (5763294-5763141) | |
| 426-616, gnl|galGal2|chr4 (506527-506310) | |
| 426-616, gnl|galGal2|chr4 (506505-506324) | |
| 426-616, gnl|hg17|chr5 (154375102-154375285) | |
| 426-616, gnl|hg17|chrX (69356472-69356692) | |
| 426-616, gnl|Hg17|chrX (69356493-69356683) | |
| 426-616, gnl|loxAfr1|scaffold_63102 (5293-5512) | |
| 426-616, gnl|loxAfr1|scaffold_63102 (5314-5495) | |
| 426-616, gnl|mm7|chr12 (98642440-98642623) | |
| 426-616, gnl|mm7|chrX (96017851-96018075) | |
| 426-616, gnl|Mm7|chrX (96017869-96018059) | |
| 426-616, gnl|monDom2|scaffold_188 (661809-662033) | |
| 426-616, gnl|monDom2|scaffold_188 (661830-662013) | |
| 426-616, gnl|oryCun1|scaffold_117333 (4101-3882) | |
| 426-616, gnl|oryCun1|scaffold_117333 (4080-3897) | |
| 426-616, gnl|panTro1|chr4 (161326656-161326839) | |
| 426-616, gnl|panTro1|chrX (71427833-71428053) | |
| 426-616, gnl|rheMac2|chr6 (151384416-151384599) | |
| 426-616, gnl|rheMac2|chrX (69333172-69333393) | |
| 426-616, gnl|rn3|chr6 (125422027-125422210) | |
| 426-616, gnl|rn3|chrX (88757850-88758073) | |
| 426-616, gnl|tetNig1|chr7 (6930202-6930404) | |
| 426-616, gnl|tetNig1|chr7 (6930237-6930397) | |
| 426-616, gnl|xenTro1|scaffold_482 (884039-883839) | |
| 426-616, gnl|xenTro1|scaffold_482 (884012-883844) |