Non-Coding RNA Search

Ss1.1-Pig4-TMW8062F22.5

Sequence:


               
               CTGTAGTTACATTTTAGTGGGGCTTTCTGCTGATAATGCTTTAGGTCAGGGTAAAGAATC
CTCAGGCTGGAATTTCATGTTCAACCACAGGCCAGTGGGGCAAGGCCTCTGGCGCATGAG
GGTCTGTGGTGCCCTGCAAATCTGTTACCAAATCAGACCACAGGAGGATTGGTTTTCAAA
CCTGCCTGCACATTTGGTTGCATCTGGGGAGCTTTAAAAAACACCACCTGATTCCCACCT
CCAGAGATTGATGTAATTGGCCTGCGGGGTTGCCTGGTGTGGGGGAAACTTTAAAAGCTC
CCCAGATGATTTCTCCTGTGTAGCCGGGGTTGAGCAGGATTGCCAGAGGCAACCACTCCC
TCCATGCTTGCTGCAGAAGTGGGAGAAATGAACTCTGGCTGGAGAAGAGCTCTCAGTACG
ATGCATTTCATTTCACAGAGACCTCTGCCTTCTCTGGTTAATATACAGGGCTCTTCCCAA
AAGAAAGACCAGTTTTTCTTGGATAATTAGGTCAGACATTATTTTGTTTGATGTGATGGA
ATGAAGCATTGTGAAAACAGCATAGTGACAAATTGACTGGTACTGTCAATTGGATTATAT
GAGCAAGCTAGTCTTTTCTACAATCTGCTGCCTCTAAGAAAGCTGGGAGTGGTCATATTT
GTTTAAAGGAATTCCTTGAAGGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGTAGTTACATTTTAGTGGGGCTTTCTGCTGATAATGCTTTAGGTCAGGGTAAAGAATC
CTCAGGCTGGAATTTCATGTTCAACCACAGGCCAGTGGGGCAAGGCCTCTGGCGCATGAG
GGTCTGTGGTGCCCTGCAAATCTGTTACCAAATCAGACCACAGGAGGATTGGTTTTCAAA
CCTGCCTGCACATTTGGTTGCATCTGGGGAGCTTTAAAAAACACCACCTGATTCCCACCT
CCAGAGATTGATGTAATTGGCCTGCGGGGTTGCCTGGTGTGGGGGAAACTTTAAAAGCTC
CCCAGATGATTTCTCCTGTGTAGCCGGGGTTGAGCAGGATTGCCAGAGGCAACCACTCCC
TCCATGCTTGCTGCAGAAGTGGGAGAAATGAACTCTGGCTGGAGAAGAGCTCTCAGTACG
ATGCATTTCATTTCACAGAGACCTCTGCCTTCTCTGGTTAATATACAGGGCTCTTCCCAA
AAGAAAGACCAGTTTTTCTTGGATAATTAGGTCAGACATTATTTTGTTTGATGTGATGGA
ATGAAGCATTGTGAAAACAGCATAGTGACAAATTGACTGGTACTGTCAATTGGATTATAT
GAGCAAGCTAGTCTTTTCTACAATCTGCTGCCTCTAAGAAAGCTGGGAGTGGTCATATTT
GTTTAAAGGAATTCCTTGAAGGTG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               196-314, + strand, RNAz p=0.999994

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               196-314, + strand, RNAz p=0.999994

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               206-339, - strand, RNAmicro p=1

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               206-339, - strand, RNAmicro p=1

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-363, gnl|bosTau2|chr24 (37393934-37394283)
               

               
               1-363, gnl|Hg17|chr18 (45841468-45841109)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-363, gnl|bosTau2|chr24 (37393934-37394283)
               

               
               1-363, gnl|Hg17|chr18 (45841468-45841109)

	1-363, gnl\|bosTau2\|chr24 (37393934-37394283)
	1-363, gnl\|Hg17\|chr18 (45841468-45841109)