Ss1.1-Pig4-TMW8062O23.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAGTCCTGGGGCCTTTTATCTCTCGACGCTAGCGAGAGGCCCAATCCGAGCCCCCAGTGT TTGGAGTCCGAGCCTTGTGTACTGCGTGCTCAGTGCCGCCCGACAGCTCCCAGCCAAACT TCGCCAACTCCGCCGCCTTTGCCGCCACCATGCCCAAGACGATCAATGTCCGTGTGACCA CCATGGATGCAGAGCTGGAGTTTGCCATCCAGCCCAACACCACTGGCAAGCAACTGTTTG ACCAGGTGGTGAAAACTATTGGCCTGAGGGAAGTTTGGTTTTTTGGTCTGCAGTACCAGG ACACTAAAGGTTTCTCTACTTGGCTGAAACTCAATAAGAAGGTGACTGCCCAGGATGTAC GGAAGGAAAGCCCCCTGCTTTTCAAGTTCCGGGCCAAGTTCTACCCTGAGGATGTATCTG AGGAATTGATCCAGGACATCACACAGCGCCTGTTCTTCCTGCAAGTGAAGGAGGGCATTC TCAATGATGATATTTACTGCCCACCTGAGACAGCCGTGTTGCTGGCCTCTTATGCTGTTC AATCCAAGTATGGTGACTTCAATAAGGAAGTTCACAAGTCGGGCTACTTGGCCGGGGACA AGTTGCTGCCACAGAGGGTCCTGGAGCAGCACAAACTCAACAAAGACCAGTGGGAGGAGC GGATCCAGGTGTGGCATGAGGAACACAGAGGCATGCTCAGGGAGGATGCTGTCTTGGAGT ATCTGAAGATTGCTCAGGATCTGGAGATGTATGGTGTGAACTACTTCAGCATCAAGAACA AGAAAGGCTCAGAGCTGTGGCTGGGGGTGGATGCCCTGGGTCTCAACATCTATGAACAGA ATGACAGACTGACTCCTAAGATAGGCTTCCCTTGGAGTGAAATCAGGAACATCTCTTTCA ATGACAAGAAATTTGTCATCAAGCCCATTGACAAAAAAGCCCCGGACTTTGTCTTCTATG CTCCTCGGCTGCGAATTAACAAGCGAATCTTGGCTCTCTGCATGGGGAACCATGAGTTAT ACATGCGCCGCCGCAAGCCTGACACCATTGAGGTGCAGCAGATGAAGGCACAGGCCCGGG AGGAGAAGCACCAGAAGCAGATGGAGCGTGCTCTGCTGGAAAATGAGAAGAAGAAACGTG AGATGGTAGAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAGTCCTGGGGCCTTTTATCTCTCGACGCTAGCGAGAGGCCCAATCCGAGCCCCCAGTGT TTGGAGTCCGAGCCTTGTGTACTGCGTGCTCAGTGCCGCCCGACAGCTCCCAGCCAAACT TCGCCAACTCCGCCGCCTTTGCCGCCACCATGCCCAAGACGATCAATGTCCGTGTGACCA CCATGGATGCAGAGCTGGAGTTTGCCATCCAGCCCAACACCACTGGCAAGCAACTGTTTG ACCAGGTGGTGAAAACTATTGGCCTGAGGGAAGTTTGGTTTTTTGGTCTGCAGTACCAGG ACACTAAAGGTTTCTCTACTTGGCTGAAACTCAATAAGAAGGTGACTGCCCAGGATGTAC GGAAGGAAAGCCCCCTGCTTTTCAAGTTCCGGGCCAAGTTCTACCCTGAGGATGTATCTG AGGAATTGATCCAGGACATCACACAGCGCCTGTTCTTCCTGCAAGTGAAGGAGGGCATTC TCAATGATGATATTTACTGCCCACCTGAGACAGCCGTGTTGCTGGCCTCTTATGCTGTTC AATCCAAGTATGGTGACTTCAATAAGGAAGTTCACAAGTCGGGCTACTTGGCCGGGGACA AGTTGCTGCCACAGAGGGTCCTGGAGCAGCACAAACTCAACAAAGACCAGTGGGAGGAGC GGATCCAGGTGTGGCATGAGGAACACAGAGGCATGCTCAGGGAGGATGCTGTCTTGGAGT ATCTGAAGATTGCTCAGGATCTGGAGATGTATGGTGTGAACTACTTCAGCATCAAGAACA AGAAAGGCTCAGAGCTGTGGCTGGGGGTGGATGCCCTGGGTCTCAACATCTATGAACAGA ATGACAGACTGACTCCTAAGATAGGCTTCCCTTGGAGTGAAATCAGGAACATCTCTTTCA ATGACAAGAAATTTGTCATCAAGCCCATTGACAAAAAAGCCCCGGACTTTGTCTTCTATG CTCCTCGGCTGCGAATTAACAAGCGAATCTTGGCTCTCTGCATGGGGAACCATGAGTTAT ACATGCGCCGCCGCAAGCCTGACACCATTGAGGTGCAGCAGATGAAGGCACAGGCCCGGG AGGAGAAGCACCAGAAGCAGATGGAGCGTGCTCTGCTGGAAAATGAGAAGAAGAAACGTG AGATGGTAGAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 101 entry(ies) | More info |
| Aligned organism(s): 101 entry(ies) | Help | Less info |
| 21-170, gnl|bosTau2|chrX (31120787-31120934) | |
| 21-170, gnl|canFam2|chrX (53633167-53633343) | |
| 21-170, gnl|hg17|chr5 (25945205-25945380) | |
| 21-170, gnl|Hg17|chrX (64670602-64670750) | |
| 21-170, gnl|loxAfr1|scaffold_35300 (15778-15603) | |
| 21-170, gnl|mm7|chrX (91423421-91423582) | |
| 21-170, gnl|Mm7|chrX (91423457-91423607) | |
| 21-170, gnl|oryCun1|scaffold_213327 (17924-18100) | |
| 21-170, gnl|panTro1|chr4 (91488311-91488136) | |
| 21-170, gnl|rheMac2|chrX (64229790-64229954) | |
| 21-170, gnl|rn3|chrX (83789296-83789459) | |
| 294-628, gnl|bosTau2|chr15 (8769382-8769046) | |
| 294-628, gnl|Hg17|chr11 (109640219-109639883) | |
| 294-628, gnl|Mm7|chr9 (52043979-52044304) | |
| 694-847, gnl|bosTau2|chrX (27945633-27945786) | |
| 694-847, gnl|canFam2|chrX (53687857-53688042) | |
| 694-847, gnl|canFam2|chrX (53687869-53688013) | |
| 694-847, gnl|danRer3|chrNA (22402429-22402268) | |
| 694-847, gnl|danRer3|chrNA (22402416-22402275) | |
| 694-847, gnl|dasNov1|scaffold_34978 (12319-12498) | |
| 694-847, gnl|dasNov1|scaffold_59573 (8920-9050) | |
| 694-847, gnl|echTel1|scaffold_225947 (5976-6161) | |
| 694-847, gnl|echTel1|scaffold_225947 (5988-6132) | |
| 694-847, gnl|fr1|chrUn (203055371-203055569) | |
| 694-847, gnl|fr1|chrUn (203055386-203055527) | |
| 694-847, gnl|galGal2|chr4 (1563482-1563320) | |
| 694-847, gnl|galGal2|chr4 (1563470-1563326) | |
| 694-847, gnl|hg17|chr5 (25945924-25946068) | |
| 694-847, gnl|hg17|chrX (64734708-64734893) | |
| 694-847, gnl|Hg17|chrX (64734714-64734867) | |
| 694-847, gnl|loxAfr1|scaffold_1964 (46535-46350) | |
| 694-847, gnl|loxAfr1|scaffold_1964 (46523-46379) | |
| 694-847, gnl|mm7|chrX (91482806-91482990) | |
| 694-847, gnl|mm7|chrX (91482818-91482962) | |
| 694-847, gnl|Mm7|chrX (91482812-91482965) | |
| 694-847, gnl|monDom2|scaffold_138 (2435650-2435488) | |
| 694-847, gnl|monDom2|scaffold_138 (2435638-2435494) | |
| 694-847, gnl|oryCun1|scaffold_198803 (3657-3512) | |
| 694-847, gnl|oryCun1|scaffold_48777 (2234-2090) | |
| 694-847, gnl|panTro1|chr4 (91487596-91487452) | |
| 694-847, gnl|panTro1|chrX (66518533-66518718) | |
| 694-847, gnl|rheMac2|chrX (64294900-64295084) | |
| 694-847, gnl|rheMac2|chrX (64294911-64295055) | |
| 694-847, gnl|rn3|chrX (83847151-83847335) | |
| 694-847, gnl|rn3|chrX (83847163-83847307) | |
| 694-847, gnl|tetNig1|chr7 (5751022-5750861) | |
| 694-847, gnl|tetNig1|chr7 (5751008-5750867) | |
| 694-847, gnl|xenTro1|scaffold_396 (564396-564572) | |
| 694-847, gnl|xenTro1|scaffold_396 (564407-564551) | |
| 698-846, gnl|bosTau2|chr15 (8760510-8760362) | |
| 698-846, gnl|canFam2|chr5 (25599936-25599838) | |
| 698-846, gnl|danRer3|chr20 (16607543-16607446) | |
| 698-846, gnl|dasNov1|scaffold_2940 (7431-7333) | |
| 698-846, gnl|echTel1|scaffold_225947 (6138-6040) | |
| 698-846, gnl|fr1|chrUn (172178587-172178490) | |
| 698-846, gnl|galGal2|chr1 (171590000-171589902) | |
| 698-846, gnl|hg17|chr11 (4189203-4189297) | |
| 698-846, gnl|Hg17|chr11 (109633851-109633703) | |
| 698-846, gnl|loxAfr1|scaffold_24170 (20291-20389) | |
| 698-846, gnl|mm7|chr8 (5046894-5046796) | |
| 698-846, gnl|Mm7|chr9 (52046500-52046648) | |
| 698-846, gnl|monDom2|scaffold_2 (132099514-132099416) | |
| 698-846, gnl|oryCun1|scaffold_48777 (2084-2182) | |
| 698-846, gnl|panTro1|chr9 (4321058-4321152) | |
| 698-846, gnl|rheMac2|chr14 (108753739-108753837) | |
| 698-846, gnl|rn3|chr8 (55446878-55446780) | |
| 698-846, gnl|tetNig1|chr3 (6336937-6337034) | |
| 698-846, gnl|xenTro1|scaffold_396 (564553-564459) | |
| 937-1105, gnl|bosTau2|chr15 (8758254-8758086) | |
| 937-1105, gnl|canFam2|chr5 (25602835-25602672) | |
| 937-1105, gnl|canFam2|chr5 (25602671-25602803) | |
| 937-1105, gnl|danRer3|chr20 (16617717-16617553) | |
| 937-1105, gnl|danRer3|chrNA (22399770-22399638) | |
| 937-1105, gnl|dasNov1|scaffold_2940 (10748-10593) | |
| 937-1105, gnl|dasNov1|scaffold_59573 (9157-9285) | |
| 937-1105, gnl|echTel1|scaffold_225947 (8969-8805) | |
| 937-1105, gnl|echTel1|scaffold_225947 (8805-8937) | |
| 937-1105, gnl|fr1|chrUn (172179531-172179273) | |
| 937-1105, gnl|fr1|chrUn (232203246-232203378) | |
| 937-1105, gnl|galGal2|chr1 (171592343-171592179) | |
| 937-1105, gnl|galGal2|chr1 (171592179-171592311) | |
| 937-1105, gnl|hg17|chr11 (4188943-4189108) | |
| 937-1105, gnl|hg17|chrX (27296725-27296857) | |
| 937-1105, gnl|loxAfr1|scaffold_24170 (20026-20192) | |
| 937-1105, gnl|loxAfr1|scaffold_24170 (20191-20058) | |
| 937-1105, gnl|mm7|chr8 (5047132-5046977) | |
| 937-1105, gnl|mm7|chr9 (52047989-52048121) | |
| 937-1105, gnl|monDom2|scaffold_1 (89800357-89800489) | |
| 937-1105, gnl|monDom2|scaffold_2 (132109736-132109573) | |
| 937-1105, gnl|oryCun1|scaffold_48777 (1824-1988) | |
| 937-1105, gnl|oryCun1|scaffold_48777 (1988-1856) | |
| 937-1105, gnl|panTro1|chr9 (4320798-4320963) | |
| 937-1105, gnl|panTro1|chr9 (4320957-4320830) | |
| 937-1105, gnl|rheMac2|chr14 (108749924-108750084) | |
| 937-1105, gnl|rheMac2|chrX (25364122-25364254) | |
| 937-1105, gnl|rn3|chr8 (55448862-55448701) | |
| 937-1105, gnl|rn3|chr8 (55448701-55448833) | |
| 937-1105, gnl|tetNig1|chr3 (6336101-6336356) | |
| 937-1105, gnl|tetNig1|chr3 (6336265-6336133) | |
| 937-1105, gnl|xenTro1|scaffold_327 (3929-3797) | |
| 937-1105, gnl|xenTro1|scaffold_396 (566579-566416) |
| Aligned organism(s): 101 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 21-170, gnl|bosTau2|chrX (31120787-31120934) | |
| 21-170, gnl|canFam2|chrX (53633167-53633343) | |
| 21-170, gnl|hg17|chr5 (25945205-25945380) | |
| 21-170, gnl|Hg17|chrX (64670602-64670750) | |
| 21-170, gnl|loxAfr1|scaffold_35300 (15778-15603) | |
| 21-170, gnl|mm7|chrX (91423421-91423582) | |
| 21-170, gnl|Mm7|chrX (91423457-91423607) | |
| 21-170, gnl|oryCun1|scaffold_213327 (17924-18100) | |
| 21-170, gnl|panTro1|chr4 (91488311-91488136) | |
| 21-170, gnl|rheMac2|chrX (64229790-64229954) | |
| 21-170, gnl|rn3|chrX (83789296-83789459) | |
| 294-628, gnl|bosTau2|chr15 (8769382-8769046) | |
| 294-628, gnl|Hg17|chr11 (109640219-109639883) | |
| 294-628, gnl|Mm7|chr9 (52043979-52044304) | |
| 694-847, gnl|bosTau2|chrX (27945633-27945786) | |
| 694-847, gnl|canFam2|chrX (53687857-53688042) | |
| 694-847, gnl|canFam2|chrX (53687869-53688013) | |
| 694-847, gnl|danRer3|chrNA (22402429-22402268) | |
| 694-847, gnl|danRer3|chrNA (22402416-22402275) | |
| 694-847, gnl|dasNov1|scaffold_34978 (12319-12498) | |
| 694-847, gnl|dasNov1|scaffold_59573 (8920-9050) | |
| 694-847, gnl|echTel1|scaffold_225947 (5976-6161) | |
| 694-847, gnl|echTel1|scaffold_225947 (5988-6132) | |
| 694-847, gnl|fr1|chrUn (203055371-203055569) | |
| 694-847, gnl|fr1|chrUn (203055386-203055527) | |
| 694-847, gnl|galGal2|chr4 (1563482-1563320) | |
| 694-847, gnl|galGal2|chr4 (1563470-1563326) | |
| 694-847, gnl|hg17|chr5 (25945924-25946068) | |
| 694-847, gnl|hg17|chrX (64734708-64734893) | |
| 694-847, gnl|Hg17|chrX (64734714-64734867) | |
| 694-847, gnl|loxAfr1|scaffold_1964 (46535-46350) | |
| 694-847, gnl|loxAfr1|scaffold_1964 (46523-46379) | |
| 694-847, gnl|mm7|chrX (91482806-91482990) | |
| 694-847, gnl|mm7|chrX (91482818-91482962) | |
| 694-847, gnl|Mm7|chrX (91482812-91482965) | |
| 694-847, gnl|monDom2|scaffold_138 (2435650-2435488) | |
| 694-847, gnl|monDom2|scaffold_138 (2435638-2435494) | |
| 694-847, gnl|oryCun1|scaffold_198803 (3657-3512) | |
| 694-847, gnl|oryCun1|scaffold_48777 (2234-2090) | |
| 694-847, gnl|panTro1|chr4 (91487596-91487452) | |
| 694-847, gnl|panTro1|chrX (66518533-66518718) | |
| 694-847, gnl|rheMac2|chrX (64294900-64295084) | |
| 694-847, gnl|rheMac2|chrX (64294911-64295055) | |
| 694-847, gnl|rn3|chrX (83847151-83847335) | |
| 694-847, gnl|rn3|chrX (83847163-83847307) | |
| 694-847, gnl|tetNig1|chr7 (5751022-5750861) | |
| 694-847, gnl|tetNig1|chr7 (5751008-5750867) | |
| 694-847, gnl|xenTro1|scaffold_396 (564396-564572) | |
| 694-847, gnl|xenTro1|scaffold_396 (564407-564551) | |
| 698-846, gnl|bosTau2|chr15 (8760510-8760362) | |
| 698-846, gnl|canFam2|chr5 (25599936-25599838) | |
| 698-846, gnl|danRer3|chr20 (16607543-16607446) | |
| 698-846, gnl|dasNov1|scaffold_2940 (7431-7333) | |
| 698-846, gnl|echTel1|scaffold_225947 (6138-6040) | |
| 698-846, gnl|fr1|chrUn (172178587-172178490) | |
| 698-846, gnl|galGal2|chr1 (171590000-171589902) | |
| 698-846, gnl|hg17|chr11 (4189203-4189297) | |
| 698-846, gnl|Hg17|chr11 (109633851-109633703) | |
| 698-846, gnl|loxAfr1|scaffold_24170 (20291-20389) | |
| 698-846, gnl|mm7|chr8 (5046894-5046796) | |
| 698-846, gnl|Mm7|chr9 (52046500-52046648) | |
| 698-846, gnl|monDom2|scaffold_2 (132099514-132099416) | |
| 698-846, gnl|oryCun1|scaffold_48777 (2084-2182) | |
| 698-846, gnl|panTro1|chr9 (4321058-4321152) | |
| 698-846, gnl|rheMac2|chr14 (108753739-108753837) | |
| 698-846, gnl|rn3|chr8 (55446878-55446780) | |
| 698-846, gnl|tetNig1|chr3 (6336937-6337034) | |
| 698-846, gnl|xenTro1|scaffold_396 (564553-564459) | |
| 937-1105, gnl|bosTau2|chr15 (8758254-8758086) | |
| 937-1105, gnl|canFam2|chr5 (25602835-25602672) | |
| 937-1105, gnl|canFam2|chr5 (25602671-25602803) | |
| 937-1105, gnl|danRer3|chr20 (16617717-16617553) | |
| 937-1105, gnl|danRer3|chrNA (22399770-22399638) | |
| 937-1105, gnl|dasNov1|scaffold_2940 (10748-10593) | |
| 937-1105, gnl|dasNov1|scaffold_59573 (9157-9285) | |
| 937-1105, gnl|echTel1|scaffold_225947 (8969-8805) | |
| 937-1105, gnl|echTel1|scaffold_225947 (8805-8937) | |
| 937-1105, gnl|fr1|chrUn (172179531-172179273) | |
| 937-1105, gnl|fr1|chrUn (232203246-232203378) | |
| 937-1105, gnl|galGal2|chr1 (171592343-171592179) | |
| 937-1105, gnl|galGal2|chr1 (171592179-171592311) | |
| 937-1105, gnl|hg17|chr11 (4188943-4189108) | |
| 937-1105, gnl|hg17|chrX (27296725-27296857) | |
| 937-1105, gnl|loxAfr1|scaffold_24170 (20026-20192) | |
| 937-1105, gnl|loxAfr1|scaffold_24170 (20191-20058) | |
| 937-1105, gnl|mm7|chr8 (5047132-5046977) | |
| 937-1105, gnl|mm7|chr9 (52047989-52048121) | |
| 937-1105, gnl|monDom2|scaffold_1 (89800357-89800489) | |
| 937-1105, gnl|monDom2|scaffold_2 (132109736-132109573) | |
| 937-1105, gnl|oryCun1|scaffold_48777 (1824-1988) | |
| 937-1105, gnl|oryCun1|scaffold_48777 (1988-1856) | |
| 937-1105, gnl|panTro1|chr9 (4320798-4320963) | |
| 937-1105, gnl|panTro1|chr9 (4320957-4320830) | |
| 937-1105, gnl|rheMac2|chr14 (108749924-108750084) | |
| 937-1105, gnl|rheMac2|chrX (25364122-25364254) | |
| 937-1105, gnl|rn3|chr8 (55448862-55448701) | |
| 937-1105, gnl|rn3|chr8 (55448701-55448833) | |
| 937-1105, gnl|tetNig1|chr3 (6336101-6336356) | |
| 937-1105, gnl|tetNig1|chr3 (6336265-6336133) | |
| 937-1105, gnl|xenTro1|scaffold_327 (3929-3797) | |
| 937-1105, gnl|xenTro1|scaffold_396 (566579-566416) |