Non-Coding RNA Search

Ss1.1-Pig4-TMW8063F24.3

Sequence:


               
               AGGATCTTCTCAAATTTGAGGATAACTTCATTTGCTTAGATATGATCAGAGTCCAGAACT
TACTGGCAGCCTCTCAAATCTTTGGGGGGAATTTTGAATGTTCTGCATTTTTTGGTCTCA
TGTGATGTAACAGACATGACTTTGACTCTCATGTAAGCCCCAAACATCCTGAAGCCGTGG
GAGCTCCCGCCTGTCGGAGGGAGCTGTTCTGGCAGCTGTTGGGTGGGCCTGGGGAGCAGC
AAAGGAGAGGGCCAGCACTGGTGTTCCCTCCTAGACCTGCTTATGAGGGGGCCTGGGGAG
CAGCAAGGGAGAGGGCCAGCACCGGTGTTCCCTCCTAGACCTGCTTATGAGATCTTGTTG
TCAGAAGGAAGCCAGAGGTCATTGGAACCCACTACCCTTTTCCTGCCAGCAGAGTCCCTT
TTGCAGTGTCCCAAGTGGCGGCTTAGCTGCACACAGATGTCTCCAGTGACAGGTGTGCCT
CCTGAGACAGCCCACTGCACCTTCAGTTCTGTTGACCCTTTATCACCTTGACCTCCTCTA
TAAAACAAGTTGGACCTCTCTTTATGTCATAGCTTTTAGATATTTGAAAACAGCTCAGTC
CCCCCAGTGAGTATTTTCCCAAAGTAGTTTTCCCAGTTATGCACGTTATTTTTCCTGTGA
CAAGGTATCTGATTCCTCTGCCATCCTAGCCATTCTTTGGATCCCCCCAGGTTGCTTGTG
TCTTAGAGTGTCGGGTCCACCACTGACCACCTAACTCTCACTAATGTACAGTAGAGTCGG
CTTTTTATTGCCCATATTTTAGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGATCTTCTCAAATTTGAGGATAACTTCATTTGCTTAGATATGATCAGAGTCCAGAACT
TACTGGCAGCCTCTCAAATCTTTGGGGGGAATTTTGAATGTTCTGCATTTTTTGGTCTCA
TGTGATGTAACAGACATGACTTTGACTCTCATGTAAGCCCCAAACATCCTGAAGCCGTGG
GAGCTCCCGCCTGTCGGAGGGAGCTGTTCTGGCAGCTGTTGGGTGGGCCTGGGGAGCAGC
AAAGGAGAGGGCCAGCACTGGTGTTCCCTCCTAGACCTGCTTATGAGGGGGCCTGGGGAG
CAGCAAGGGAGAGGGCCAGCACCGGTGTTCCCTCCTAGACCTGCTTATGAGATCTTGTTG
TCAGAAGGAAGCCAGAGGTCATTGGAACCCACTACCCTTTTCCTGCCAGCAGAGTCCCTT
TTGCAGTGTCCCAAGTGGCGGCTTAGCTGCACACAGATGTCTCCAGTGACAGGTGTGCCT
CCTGAGACAGCCCACTGCACCTTCAGTTCTGTTGACCCTTTATCACCTTGACCTCCTCTA
TAAAACAAGTTGGACCTCTCTTTATGTCATAGCTTTTAGATATTTGAAAACAGCTCAGTC
CCCCCAGTGAGTATTTTCCCAAAGTAGTTTTCCCAGTTATGCACGTTATTTTTCCTGTGA
CAAGGTATCTGATTCCTCTGCCATCCTAGCCATTCTTTGGATCCCCCCAGGTTGCTTGTG
TCTTAGAGTGTCGGGTCCACCACTGACCACCTAACTCTCACTAATGTACAGTAGAGTCGG
CTTTTTATTGCCCATATTTTAGAA

Aligned organism(s): 8 entry(ies)

More info

Aligned organism(s): 8 entry(ies)

Help | Less info


               
               1-218, gnl|bosTau2|chr19 (42420323-42420103)
               

               
               1-218, gnl|Hg17|chr17 (41062689-41062905)
               

               
               1-218, gnl|Mm7|chr11 (104088324-104088522)
               


               
               305-521, gnl|bosTau2|chr19 (42420035-42419815)
               

               
               305-521, gnl|Hg17|chr17 (41062947-41063166)
               


               
               544-803, gnl|bosTau2|chr19 (42419516-42419246)
               

               
               544-803, gnl|Hg17|chr17 (41063228-41063495)
               

               
               544-803, gnl|Mm7|chr11 (104088803-104089041)

Aligned organism(s): 8 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-218, gnl|bosTau2|chr19 (42420323-42420103)
               

               
               1-218, gnl|Hg17|chr17 (41062689-41062905)
               

               
               1-218, gnl|Mm7|chr11 (104088324-104088522)
               


               
               305-521, gnl|bosTau2|chr19 (42420035-42419815)
               

               
               305-521, gnl|Hg17|chr17 (41062947-41063166)
               


               
               544-803, gnl|bosTau2|chr19 (42419516-42419246)
               

               
               544-803, gnl|Hg17|chr17 (41063228-41063495)
               

               
               544-803, gnl|Mm7|chr11 (104088803-104089041)

	1-218, gnl\|bosTau2\|chr19 (42420323-42420103)
	1-218, gnl\|Hg17\|chr17 (41062689-41062905)
	1-218, gnl\|Mm7\|chr11 (104088324-104088522)

	305-521, gnl\|bosTau2\|chr19 (42420035-42419815)
	305-521, gnl\|Hg17\|chr17 (41062947-41063166)

	544-803, gnl\|bosTau2\|chr19 (42419516-42419246)
	544-803, gnl\|Hg17\|chr17 (41063228-41063495)
	544-803, gnl\|Mm7\|chr11 (104088803-104089041)