Non-Coding RNA Search

Ss1.1-Pig4-TMW8063H12.5

Sequence:


               
               GAACAAGTTCCAGTTTTTCTGGTACTTTCCCAGTAGTACAGTTTTTGAAGTCCATCATCC
CCTGCTTATACTGATGGATCCTGAGTAAATCAGATAATGGTTCTAAGAGACAGTGAGCTC
TGCAGCTGTACTGTGCATGTTTTAAGAGGACATATTGGGCAGCATCACTGTCACACCTGT
CACTGTTGACAGACTCATGCTTACTCTGGCCCTGGTTCTTCCTAGTGCTGCCCTGCCTGA
CTGGGGAGCAATCCCTGTGATATCCAGCCATTTTTCATGTATTTAATAACCTGGCCAGCA
TTCTCACAGCCGTGGTAGGTATTATGCCTAATAGTGTAGCCAGTGTGGCCATTAAAATTT
TAATTAAAAATTCACTTCATTTTCATGTCCACACTTCAAGTGCACTACTACCACATTGAA
TAGCACAGATATAGAGCATTTACATTGTTACAGAAATGTCTGTTGTGCCTAGGCCCAACA
AATGCCAAGCCTCTTCAGAGTAGATGCCTGGTTTTCATAACCACTGGTGTTGGTGGTAGG
GAACAGCAGTGGGGTGGGAAGAGGGAGTGTGTTGTGTGGTAGGAGAGGGGAGGGGAGGTG
GCGGCAGATATTAAAGCATATGGGGTGAAAGATTCTCCTGTTCCAGTGACATGAAACCAT
TTTCTTTGGGATAAATCTCATACATGCTTCTAGCCCTCAAGATTGAAGGCAGTTTGGCTT
AGGGGAGACTGTCCTTCTTTCGTAAGGCCTCTTGCCACAGTTGTATTTTGAGGAAGCTCT
GTGGGGCTGGGAGGGAGTGCCTCATGTCTGCCCATCTGCTGTTTGCCAACTTCCATTTTT
TTGTACTTGGAGGTTGAGGTGATTCAGTGAAGGAGGACTGGCCTTGTCCCTGGCCATGGT
CAGAGAGCCAGGTAAGAGGGACTGAGGGGCAAGGGACACATGACAATGTTGATGGGAACA
GAAGGGAAAGTT------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------CCCCTTCCCCCCCAAAAGGGAAAGTTTTACTGAACTTTTTTGTCATCT
GTAACATGTGGTGCACAAGTTCTGTTTTCCTCCAATTATAGTAAGGTAGGTTGGGGGGCA
GCTGGTACCTCTGACCTAAAAGGATTGCTGATTTTTCCATTTTCAGTTTGAATATAAATT
AAATTTGTATTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAACAAGTTCCAGTTTTTCTGGTACTTTCCCAGTAGTACAGTTTTTGAAGTCCATCATCC
CCTGCTTATACTGATGGATCCTGAGTAAATCAGATAATGGTTCTAAGAGACAGTGAGCTC
TGCAGCTGTACTGTGCATGTTTTAAGAGGACATATTGGGCAGCATCACTGTCACACCTGT
CACTGTTGACAGACTCATGCTTACTCTGGCCCTGGTTCTTCCTAGTGCTGCCCTGCCTGA
CTGGGGAGCAATCCCTGTGATATCCAGCCATTTTTCATGTATTTAATAACCTGGCCAGCA
TTCTCACAGCCGTGGTAGGTATTATGCCTAATAGTGTAGCCAGTGTGGCCATTAAAATTT
TAATTAAAAATTCACTTCATTTTCATGTCCACACTTCAAGTGCACTACTACCACATTGAA
TAGCACAGATATAGAGCATTTACATTGTTACAGAAATGTCTGTTGTGCCTAGGCCCAACA
AATGCCAAGCCTCTTCAGAGTAGATGCCTGGTTTTCATAACCACTGGTGTTGGTGGTAGG
GAACAGCAGTGGGGTGGGAAGAGGGAGTGTGTTGTGTGGTAGGAGAGGGGAGGGGAGGTG
GCGGCAGATATTAAAGCATATGGGGTGAAAGATTCTCCTGTTCCAGTGACATGAAACCAT
TTTCTTTGGGATAAATCTCATACATGCTTCTAGCCCTCAAGATTGAAGGCAGTTTGGCTT
AGGGGAGACTGTCCTTCTTTCGTAAGGCCTCTTGCCACAGTTGTATTTTGAGGAAGCTCT
GTGGGGCTGGGAGGGAGTGCCTCATGTCTGCCCATCTGCTGTTTGCCAACTTCCATTTTT
TTGTACTTGGAGGTTGAGGTGATTCAGTGAAGGAGGACTGGCCTTGTCCCTGGCCATGGT
CAGAGAGCCAGGTAAGAGGGACTGAGGGGCAAGGGACACATGACAATGTTGATGGGAACA
GAAGGGAAAGTT------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------CCCCTTCCCCCCCAAAAGGGAAAGTTTTACTGAACTTTTTTGTCATCT
GTAACATGTGGTGCACAAGTTCTGTTTTCCTCCAATTATAGTAAGGTAGGTTGGGGGGCA
GCTGGTACCTCTGACCTAAAAGGATTGCTGATTTTTCCATTTTCAGTTTGAATATAAATT
AAATTTGTATTT

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

Help | Less info


               
               625-972, gnl|bosTau2|chr22 (37371739-37371398)

Aligned organism(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               625-972, gnl|bosTau2|chr22 (37371739-37371398)