Non-Coding RNA Search

Ss1.1-Pig4-TMW8064J07.3

Sequence:


               
               GGAAAACCAAAAATAAAATAAAAT------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------GTGTTTTTTAAAAATTGGAGTATA
ACTGACATTATATTAGCGTCAGGTGTACAACATAATGATTTGACATTTGTATATATTGCA
AGATGCTCACAATAAGATCCATCACCATACATAGTTACAAAAATTCTTTTTTCTTCTGAT
GACAACTTTCAAGATCCACTCTGCTGTCTCCTTTCAACTATACAAGATGGGGAGACAGGA
CTAAGACGGCAGAGTAGAAAAGACTAGAGCTCACCTTCTCATAAAAGGAACAAAATTACA
ACCAACTGCTGAACCTTCAACCAAATAAGCTGAAAACTGTCAAAAAAGATATCCTGCTCC
AGAAGACAAAGAGGAGGCCACATCGAGACAACAGAAGGAAAAATTATGTGATATAAGCAA
CCGCATACCCACTGGGTGGGCAGCCCACAGACTGGAAAGTAACTTTATCACAGAGACTCA
CTTACAGGAGTGAGAGTTCTGAGCCCCACGGCAGGTCTGCAAGCCTGGGCATCTTGCACT
GGGAGAAGGAGCCCATGGAGCATCTGGCATTGAAGGCCAGTGGGACTTGTGCGCAGGAGC
TCCACAGGATTGGGGGAAATGGAGACCCCATTCTTGAAAGGCACACACAAGCTTTCTTAT
GCACTGGGTCCCAGGGCAAAGCAGAGACTCCATAGGAATCTGGGTCAGACTTGACTGTAG
TTCTTGGAGGATCTCCTAAGAAAACAGGGGGTGACTGTGGCTTGTCGTGGGGGAAGGACT
TTGGAGGCATAGGTCTCGGCAATATTCATCTGCATGTGCTCCTATAGAGGTGGCCATTTT
GGGAAAATCTGGCCCCACCCATCAGGGCTGAGAAGCCACAAGCCGAACAGTAATCCTGGT
GGGATCACAGCCCCACCCATCAGCAAACAAGGCTGCCCAGAATCCCCCCAAGCACGCAGC
CATCTTACCCAGAGACAAAGCCCCACCCACCATAGGGATAAGAATCACCTCCACCTACGA
GAGGGCAGGCACAAGTCCCTCCCATCAGGAAGCCTACAGCAAGCCCCCTACCAACTTCAG
CCCCAAGGGGGGCAGACAGCCTAATCGAGAGAGGCTACAACTCTATTGTCTGCGAAAAGG
AGACCACACCAAAAAATCTATACAAAATGAAAGGCAGAGAATTATGATTTAAATAAGGTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAAAACCAAAAATAAAATAAAAT------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------GTGTTTTTTAAAAATTGGAGTATA
ACTGACATTATATTAGCGTCAGGTGTACAACATAATGATTTGACATTTGTATATATTGCA
AGATGCTCACAATAAGATCCATCACCATACATAGTTACAAAAATTCTTTTTTCTTCTGAT
GACAACTTTCAAGATCCACTCTGCTGTCTCCTTTCAACTATACAAGATGGGGAGACAGGA
CTAAGACGGCAGAGTAGAAAAGACTAGAGCTCACCTTCTCATAAAAGGAACAAAATTACA
ACCAACTGCTGAACCTTCAACCAAATAAGCTGAAAACTGTCAAAAAAGATATCCTGCTCC
AGAAGACAAAGAGGAGGCCACATCGAGACAACAGAAGGAAAAATTATGTGATATAAGCAA
CCGCATACCCACTGGGTGGGCAGCCCACAGACTGGAAAGTAACTTTATCACAGAGACTCA
CTTACAGGAGTGAGAGTTCTGAGCCCCACGGCAGGTCTGCAAGCCTGGGCATCTTGCACT
GGGAGAAGGAGCCCATGGAGCATCTGGCATTGAAGGCCAGTGGGACTTGTGCGCAGGAGC
TCCACAGGATTGGGGGAAATGGAGACCCCATTCTTGAAAGGCACACACAAGCTTTCTTAT
GCACTGGGTCCCAGGGCAAAGCAGAGACTCCATAGGAATCTGGGTCAGACTTGACTGTAG
TTCTTGGAGGATCTCCTAAGAAAACAGGGGGTGACTGTGGCTTGTCGTGGGGGAAGGACT
TTGGAGGCATAGGTCTCGGCAATATTCATCTGCATGTGCTCCTATAGAGGTGGCCATTTT
GGGAAAATCTGGCCCCACCCATCAGGGCTGAGAAGCCACAAGCCGAACAGTAATCCTGGT
GGGATCACAGCCCCACCCATCAGCAAACAAGGCTGCCCAGAATCCCCCCAAGCACGCAGC
CATCTTACCCAGAGACAAAGCCCCACCCACCATAGGGATAAGAATCACCTCCACCTACGA
GAGGGCAGGCACAAGTCCCTCCCATCAGGAAGCCTACAGCAAGCCCCCTACCAACTTCAG
CCCCAAGGGGGGCAGACAGCCTAATCGAGAGAGGCTACAACTCTATTGTCTGCGAAAAGG
AGACCACACCAAAAAATCTATACAAAATGAAAGGCAGAGAATTATGATTTAAATAAGGTT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               211-1032, gnl|bosTau2|chr7 (63019174-63020019)
               


               
               218-954, gnl|bosTau2|chr7 (24935711-24934962)
               


               
               231-676, gnl|bosTau2|chr7 (41881875-41881431)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               211-1032, gnl|bosTau2|chr7 (63019174-63020019)
               


               
               218-954, gnl|bosTau2|chr7 (24935711-24934962)
               


               
               231-676, gnl|bosTau2|chr7 (41881875-41881431)

	211-1032, gnl\|bosTau2\|chr7 (63019174-63020019)

	218-954, gnl\|bosTau2\|chr7 (24935711-24934962)

	231-676, gnl\|bosTau2\|chr7 (41881875-41881431)