Ss1.1-Pig4-TMW8064J22.3
|
GGAACACCACCCCCAACCCCCCTGCCTGCGCCACACAGTTGTGGAAGCCAGAGAAGATCA
TGAAAAATGAAAATTTTCTGTATGCAATTGACTGGTATCAGATACATACCGGACTTCAAC
ATTCTATCATAAGGCCTACCCAGCCCAACTGCTTACCTCTGGACAATGCAACCCTACCTC
AGAAGCTGAAAGAGGTTGGATATTCAACACATATGGTTGGAAAATGGCACTTGGGTTTTT
ATAGAAAAGAATGTATGCCTACCAAGAGAGGATTTGATACTTTTTTTGGTTCCCTCTTGG
GAAGTGGCGATTATTATACACACTACAAATGTGACAGTCCTGGGATGTGTGGCTATGACT |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGAACACCACCCCCAACCCCCCTGCCTGCGCCACACAGTTGTGGAAGCCAGAGAAGATCA
TGAAAAATGAAAATTTTCTGTATGCAATTGACTGGTATCAGATACATACCGGACTTCAAC
ATTCTATCATAAGGCCTACCCAGCCCAACTGCTTACCTCTGGACAATGCAACCCTACCTC
AGAAGCTGAAAGAGGTTGGATATTCAACACATATGGTTGGAAAATGGCACTTGGGTTTTT
ATAGAAAAGAATGTATGCCTACCAAGAGAGGATTTGATACTTTTTTTGGTTCCCTCTTGG
GAAGTGGCGATTATTATACACACTACAAATGTGACAGTCCTGGGATGTGTGGCTATGACT |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
134-221, - strand, RNAmicro p=0.993987 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
134-221, - strand, RNAmicro p=0.993987 |
|
94-360, gnl|bosTau2|chr2 (49424620-49424886) |
|
94-360, gnl|canFam2|chr32 (36561098-36561443) |
|
94-360, gnl|danRer3|chr10 (35608268-35607905) |
|
94-360, gnl|dasNov1|scaffold_9355 (3964-4311) |
|
94-360, gnl|echTel1|scaffold_280598 (6095-6441) |
|
94-360, gnl|fr1|chrUn (128154026-128154378) |
|
94-360, gnl|galGal2|chr4 (57008168-57007819) |
|
94-360, gnl|hg17|chr4 (115182137-115182486) |
|
94-360, gnl|Hg17|chr4 (115182436-115182170) |
|
94-360, gnl|loxAfr1|scaffold_138929 (29178-29526) |
|
94-360, gnl|mm7|chr3 (126276137-126275789) |
|
94-360, gnl|Mm7|chr3 (126275836-126276102) |
|
94-360, gnl|monDom2|scaffold_9 (79821028-79820676) |
|
94-360, gnl|panTro1|chr3 (131850081-131850430) |
|
94-360, gnl|rheMac2|chr5 (106778112-106778458) |
|
94-360, gnl|rn3|chr2 (223651838-223651489) |
|
94-360, gnl|tetNig1|chrUn_random (127802149-127802468) |
|
94-360, gnl|xenTro1|scaffold_635 (243192-242856) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
94-360, gnl|bosTau2|chr2 (49424620-49424886) |
|
94-360, gnl|canFam2|chr32 (36561098-36561443) |
|
94-360, gnl|danRer3|chr10 (35608268-35607905) |
|
94-360, gnl|dasNov1|scaffold_9355 (3964-4311) |
|
94-360, gnl|echTel1|scaffold_280598 (6095-6441) |
|
94-360, gnl|fr1|chrUn (128154026-128154378) |
|
94-360, gnl|galGal2|chr4 (57008168-57007819) |
|
94-360, gnl|hg17|chr4 (115182137-115182486) |
|
94-360, gnl|Hg17|chr4 (115182436-115182170) |
|
94-360, gnl|loxAfr1|scaffold_138929 (29178-29526) |
|
94-360, gnl|mm7|chr3 (126276137-126275789) |
|
94-360, gnl|Mm7|chr3 (126275836-126276102) |
|
94-360, gnl|monDom2|scaffold_9 (79821028-79820676) |
|
94-360, gnl|panTro1|chr3 (131850081-131850430) |
|
94-360, gnl|rheMac2|chr5 (106778112-106778458) |
|
94-360, gnl|rn3|chr2 (223651838-223651489) |
|
94-360, gnl|tetNig1|chrUn_random (127802149-127802468) |
|
94-360, gnl|xenTro1|scaffold_635 (243192-242856) |
