Non-Coding RNA Search

Ss1.1-Pig4-TMW8064M02.5

Sequence:


               
               GTTCTCTGCTGCACAGGGGAAGCTTTCCTGCGTGGAGGAAGTGCCTCTGGAGCGGGCGGA
ACTCCTCCACCGGCTGACACGGACGCCTCCGCTTACCTGCTCCCGGATGTGCGACCGGAA
CGGCGGCCGGCGGCTGCGGCAGTGGCTGATCGAGCAGATCGACAGCGCCATGTACCCGGG
GCTGATCTGGGAGAACGACCAGAAGAGCATGTTCCGGATCCCCTGGAAACACGCGGGCAA
GCAGGACTACAACCAGGAGGTGGACGCCTCCATCTTCAAGGCCTGGGCCGTCTTTAAGGG
GAAGTTTAAGGAAGGGGACAAGGCCGAACCAGCCACGTGGAAGACGAGGCTACGCTGTGC
TTTGAACAAGAGCCCGGATTTTGAGGAAGTGACAGACCGGTCCCAGCTGGACATCTCTGA
ACCATATAAAGTTTACCGCATTGTCCCCGAGGAAGAGCAAAAATGCAAACTGGGCGTGGT
GGCCCCTGGCTGCATGAGCGAAGCCACAGAGATGGAGTGCGGGCGCTCGGAGATCGAGGA
GCTGATCAAGGAGGGGCACACCCG------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------GCCTTTTTAGGCTGCAATGAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTCTCTGCTGCACAGGGGAAGCTTTCCTGCGTGGAGGAAGTGCCTCTGGAGCGGGCGGA
ACTCCTCCACCGGCTGACACGGACGCCTCCGCTTACCTGCTCCCGGATGTGCGACCGGAA
CGGCGGCCGGCGGCTGCGGCAGTGGCTGATCGAGCAGATCGACAGCGCCATGTACCCGGG
GCTGATCTGGGAGAACGACCAGAAGAGCATGTTCCGGATCCCCTGGAAACACGCGGGCAA
GCAGGACTACAACCAGGAGGTGGACGCCTCCATCTTCAAGGCCTGGGCCGTCTTTAAGGG
GAAGTTTAAGGAAGGGGACAAGGCCGAACCAGCCACGTGGAAGACGAGGCTACGCTGTGC
TTTGAACAAGAGCCCGGATTTTGAGGAAGTGACAGACCGGTCCCAGCTGGACATCTCTGA
ACCATATAAAGTTTACCGCATTGTCCCCGAGGAAGAGCAAAAATGCAAACTGGGCGTGGT
GGCCCCTGGCTGCATGAGCGAAGCCACAGAGATGGAGTGCGGGCGCTCGGAGATCGAGGA
GCTGATCAAGGAGGGGCACACCCG------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------GCCTTTTTAGGCTGCAATGAAAAA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|55644719|ref|XP_511236.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|55644719|ref|XP_511236.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               133-281, gnl|bosTau2|chr10 (12349307-12349159)
               

               
               133-281, gnl|Hg17|chr14 (23701226-23701374)
               

               
               133-281, gnl|Mm7|chr14 (50472433-50472581)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               133-281, gnl|bosTau2|chr10 (12349307-12349159)
               

               
               133-281, gnl|Hg17|chr14 (23701226-23701374)
               

               
               133-281, gnl|Mm7|chr14 (50472433-50472581)

	133-281, gnl\|bosTau2\|chr10 (12349307-12349159)
	133-281, gnl\|Hg17\|chr14 (23701226-23701374)
	133-281, gnl\|Mm7\|chr14 (50472433-50472581)