Non-Coding RNA Search

Ss1.1-Pig4-TMW8064O13.5

Sequence:


               
               TACAACACAGGACATACACTTCTCTTTTCCTCTTGGACTTGATTCCCCCACCTTTTGAGA
TTCCACTGGGAAAGCTTACATGCCAGTGAACATACTATCTGGTAAAGAAACACTATCTTC
CAGGTAATCATCATCAGCATAATCATAAGCTAACATTTATTGACAACTAGCTATATATTA
AGCATTATTCTAAGAGCATCAACTCATTTTAATCCTCTCAACAGCCCTACAATGTATACA
TACTACTATTAACTCCATTTTACAAATGAAAAGACTGATGCATAGAGCTGGTAAAAGGCA
GAGCAGGCAGACAGGCAGTCTTATTCCAGAGCCTGTGCTCTTAACCACTATGCTACTAAG
TCTCATAAAGTCAAAGTAGCCTAGGATGACCAGGCAGAGGAAAAGGAATTAACTTTTGTT
AGGGCTCAATTCAGGGTCCCATGACACACCTACCTAAGCTCCCTTCTGTTCCTTCCACAA
AGATACCAGTCAAATAGGGCAGCACCCAGTAGCGGCGTCTGTAGCGGTCTTGGCCCAAGG
AGACTGCCCGAAGCATCTGGGATGAGTGAAGCAGCTTTTTGCGAAAGAAGAGCTGACGCT
GGGTAGGCAGTGGAAAAGGAAGATAATGAAAAACACACTTCCAGGAGTTCGGTTGTGGCA
CAGCGGTAACGAACTCGACTAGTATCCATAAGGACGCAGGTCTGATCTCTGGCCTGGCTC
AGCGAGTTAATAATGATCCAGCATTGCTGTGAGATGTGGTGTAGGTCGCAGACACAGCTC
AGATCTGGCATGGCTGTGGCTGCAGCATAGGCCAGCAGCCGCAGCTAT------------
------------------------TGCCACTGGTAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACAACACAGGACATACACTTCTCTTTTCCTCTTGGACTTGATTCCCCCACCTTTTGAGA
TTCCACTGGGAAAGCTTACATGCCAGTGAACATACTATCTGGTAAAGAAACACTATCTTC
CAGGTAATCATCATCAGCATAATCATAAGCTAACATTTATTGACAACTAGCTATATATTA
AGCATTATTCTAAGAGCATCAACTCATTTTAATCCTCTCAACAGCCCTACAATGTATACA
TACTACTATTAACTCCATTTTACAAATGAAAAGACTGATGCATAGAGCTGGTAAAAGGCA
GAGCAGGCAGACAGGCAGTCTTATTCCAGAGCCTGTGCTCTTAACCACTATGCTACTAAG
TCTCATAAAGTCAAAGTAGCCTAGGATGACCAGGCAGAGGAAAAGGAATTAACTTTTGTT
AGGGCTCAATTCAGGGTCCCATGACACACCTACCTAAGCTCCCTTCTGTTCCTTCCACAA
AGATACCAGTCAAATAGGGCAGCACCCAGTAGCGGCGTCTGTAGCGGTCTTGGCCCAAGG
AGACTGCCCGAAGCATCTGGGATGAGTGAAGCAGCTTTTTGCGAAAGAAGAGCTGACGCT
GGGTAGGCAGTGGAAAAGGAAGATAATGAAAAACACACTTCCAGGAGTTCGGTTGTGGCA
CAGCGGTAACGAACTCGACTAGTATCCATAAGGACGCAGGTCTGATCTCTGGCCTGGCTC
AGCGAGTTAATAATGATCCAGCATTGCTGTGAGATGTGGTGTAGGTCGCAGACACAGCTC
AGATCTGGCATGGCTGTGGCTGCAGCATAGGCCAGCAGCCGCAGCTAT------------
------------------------TGCCACTGGTAT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               528-645, + strand, RNAz p=0.832808

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               528-645, + strand, RNAz p=0.832808

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               4-645, gnl|bosTau2|chr5 (33135575-33134921)
               

               
               4-645, gnl|Hg17|chr12 (55282309-55282952)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-645, gnl|bosTau2|chr5 (33135575-33134921)
               

               
               4-645, gnl|Hg17|chr12 (55282309-55282952)

	4-645, gnl\|bosTau2\|chr5 (33135575-33134921)
	4-645, gnl\|Hg17\|chr12 (55282309-55282952)