Ss1.1-Pig4-TMW8064P24.5
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CAGAGGACCGGCGCTCACCTGGAGCTGTCCCTCGCCAAAGACCAGGGCCTCTCCATCATG
GTTTCTGGGAAGCTGGACGCCGTCATGAAGGCCCGGAAGGACATTGTCGCTCGGCTGCAG
ACTCAGGCCTCCGCCACCGTTGCCATCCCCAAAGAGCACCATCGCTTTGTCATCGGCAAA
AACGGAGAGAAACTGCAGGACTTGGAGCTCAAAACCGCAACCAAAATCCAGATCCCACGC
CCCGATGACGCCAGCAATCAGATCAGGATCACCGGCACCAAAGAGGGCATCGAGAAGGCT
CGCCACGAGGTCCTGCTCATCTCCGCGGAGCAGGACAAACGTGCGGTGGAGCGGCTCGAG
GTGGAGAAGGCCTTCCACCCCTTCATCGCGGGGCCCTACAACCGGCTGGTCAGCGAGATC
ATGCAGGAGACGGGCACACGCATCAACATCCCGCCGCCCAGCGTCAACCGCACCGAGATC
GTCTTCACGGGCGAGAAGGAGCAGCTGGCGCAGGCCGTGGCTCGCATC
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Blue-coloured subsequences are predicted RNA structures by RNAz
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CAGAGGACCGGCGCTCACCTGGAGCTGTCCCTCGCCAAAGACCAGGGCCTCTCCATCATG
GTTTCTGGGAAGCTGGACGCCGTCATGAAGGCCCGGAAGGACATTGTCGCTCGGCTGCAG
ACTCAGGCCTCCGCCACCGTTGCCATCCCCAAAGAGCACCATCGCTTTGTCATCGGCAAA
AACGGAGAGAAACTGCAGGACTTGGAGCTCAAAACCGCAACCAAAATCCAGATCCCACGC
CCCGATGACGCCAGCAATCAGATCAGGATCACCGGCACCAAAGAGGGCATCGAGAAGGCT
CGCCACGAGGTCCTGCTCATCTCCGCGGAGCAGGACAAACGTGCGGTGGAGCGGCTCGAG
GTGGAGAAGGCCTTCCACCCCTTCATCGCGGGGCCCTACAACCGGCTGGTCAGCGAGATC
ATGCAGGAGACGGGCACACGCATCAACATCCCGCCGCCCAGCGTCAACCGCACCGAGATC
GTCTTCACGGGCGAGAAGGAGCAGCTGGCGCAGGCCGTGGCTCGCATC
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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212-332, - strand, RNAmicro p=0.977818 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
212-332, - strand, RNAmicro p=0.977818 |
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125-334, gnl|bosTau2|chr3 (82747123-82747332) |
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125-334, gnl|canFam2|chr25 (54200643-54200862) |
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125-334, gnl|danRer3|chrUn (33293616-33293401) |
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125-334, gnl|dasNov1|scaffold_38494 (1320-1101) |
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125-334, gnl|echTel1|scaffold_114650 (325-108) |
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125-334, gnl|fr1|chrUn (227738866-227738653) |
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125-334, gnl|galGal2|chr9 (8657696-8657477) |
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125-334, gnl|hg17|chr2 (241916001-241916220) |
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125-334, gnl|Hg17|chr2 (241916213-241916004) |
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125-334, gnl|loxAfr1|scaffold_12782 (34181-33962) |
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125-334, gnl|mm7|chr1 (93339117-93339336) |
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125-334, gnl|Mm7|chr1 (93339329-93339120) |
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125-334, gnl|monDom2|scaffold_69 (8638278-8638497) |
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125-334, gnl|oryCun1|scaffold_177688 (65903-66122) |
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125-334, gnl|panTro1|chr13 (133390556-133390775) |
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125-334, gnl|rheMac2|chr12 (105171996-105172215) |
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125-334, gnl|rn3|chr9 (92913878-92914097) |
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125-334, gnl|tetNig1|chrUn_random (101271307-101271521) |
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125-334, gnl|xenTro1|scaffold_382 (1161854-1162073) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
125-334, gnl|bosTau2|chr3 (82747123-82747332) |
|
125-334, gnl|canFam2|chr25 (54200643-54200862) |
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125-334, gnl|danRer3|chrUn (33293616-33293401) |
|
125-334, gnl|dasNov1|scaffold_38494 (1320-1101) |
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125-334, gnl|echTel1|scaffold_114650 (325-108) |
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125-334, gnl|fr1|chrUn (227738866-227738653) |
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125-334, gnl|galGal2|chr9 (8657696-8657477) |
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125-334, gnl|hg17|chr2 (241916001-241916220) |
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125-334, gnl|Hg17|chr2 (241916213-241916004) |
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125-334, gnl|loxAfr1|scaffold_12782 (34181-33962) |
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125-334, gnl|mm7|chr1 (93339117-93339336) |
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125-334, gnl|Mm7|chr1 (93339329-93339120) |
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125-334, gnl|monDom2|scaffold_69 (8638278-8638497) |
|
125-334, gnl|oryCun1|scaffold_177688 (65903-66122) |
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125-334, gnl|panTro1|chr13 (133390556-133390775) |
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125-334, gnl|rheMac2|chr12 (105171996-105172215) |
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125-334, gnl|rn3|chr9 (92913878-92914097) |
|
125-334, gnl|tetNig1|chrUn_random (101271307-101271521) |
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125-334, gnl|xenTro1|scaffold_382 (1161854-1162073) |
