Non-Coding RNA Search

Ss1.1-Pla1-C0000038_D20.5

Sequence:


               
               TTCACCGGAGTCTTGGAGTTCATTTTTCAAAAGTACGATCTTTAACTTTGGATACCTGGG
AGCCTGAGCTTTTAAAGCTTATGTGTGAGTTGGGGAATGATGTTATAAATAGAGTTTATG
AAGCTAATGTGGAAAAAATGGGAGTAAAGAAACCACAACCAGGACAAAGACAGGAGAAAG
AGGCATATATCAGAGCAAAATACGTGGAGAGGAAATTTGTGGATAAATATTCTATATCAT
CGTCACCTCCTGAGCAGGAAAAAAAGATTGTCTCTAAAAGTAGTGAAGATTCACAGAAAT
TTTGAATTTTTTTAAGAAGGGGAAAATAGTAAATCTGGTTACTCCCTAAAGTATACATCT
GAAAACTCACAGGAATCCAGCAGAGCTCTGATGATGGAAGAGAATCTTTACCCTCCACGG
TGTCAACGAATAGTTTATATGAGCCTGAGGGAGAAAGGCAAGATTCTTCTGTGTTTCTCG
ACTCTAAACATCTTAATCCAGGACTCCAGCTTTATAGGGCGTCGTATGAAAAAAATCTTC
CTAAAATGGCTGAAGCTTTGGCTCATGGCGCTGATGTGAACTGGGCTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCACCGGAGTCTTGGAGTTCATTTTTCAAAAGTACGATCTTTAACTTTGGATACCTGGG
AGCCTGAGCTTTTAAAGCTTATGTGTGAGTTGGGGAATGATGTTATAAATAGAGTTTATG
AAGCTAATGTGGAAAAAATGGGAGTAAAGAAACCACAACCAGGACAAAGACAGGAGAAAG
AGGCATATATCAGAGCAAAATACGTGGAGAGGAAATTTGTGGATAAATATTCTATATCAT
CGTCACCTCCTGAGCAGGAAAAAAAGATTGTCTCTAAAAGTAGTGAAGATTCACAGAAAT
TTTGAATTTTTTTAAGAAGGGGAAAATAGTAAATCTGGTTACTCCCTAAAGTATACATCT
GAAAACTCACAGGAATCCAGCAGAGCTCTGATGATGGAAGAGAATCTTTACCCTCCACGG
TGTCAACGAATAGTTTATATGAGCCTGAGGGAGAAAGGCAAGATTCTTCTGTGTTTCTCG
ACTCTAAACATCTTAATCCAGGACTCCAGCTTTATAGGGCGTCGTATGAAAAAAATCTTC
CTAAAATGGCTGAAGCTTTGGCTCATGGCGCTGATGTGAACTGGGCTA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|28385994|gb|AAH46455.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|28385994|gb|AAH46455.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               168-289, gnl|bosTau2|chr1 (44341598-44341477)
               

               
               168-289, gnl|Hg17|chr3 (196497919-196497799)
               

               
               168-289, gnl|Mm7|chr16 (30782219-30782098)
               


               
               447-588, gnl|bosTau2|chr1 (44338359-44338218)
               

               
               447-588, gnl|Hg17|chr3 (196494479-196494338)
               

               
               447-588, gnl|Mm7|chr16 (30779703-30779562)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               168-289, gnl|bosTau2|chr1 (44341598-44341477)
               

               
               168-289, gnl|Hg17|chr3 (196497919-196497799)
               

               
               168-289, gnl|Mm7|chr16 (30782219-30782098)
               


               
               447-588, gnl|bosTau2|chr1 (44338359-44338218)
               

               
               447-588, gnl|Hg17|chr3 (196494479-196494338)
               

               
               447-588, gnl|Mm7|chr16 (30779703-30779562)

	168-289, gnl\|bosTau2\|chr1 (44341598-44341477)
	168-289, gnl\|Hg17\|chr3 (196497919-196497799)
	168-289, gnl\|Mm7\|chr16 (30782219-30782098)

	447-588, gnl\|bosTau2\|chr1 (44338359-44338218)
	447-588, gnl\|Hg17\|chr3 (196494479-196494338)
	447-588, gnl\|Mm7\|chr16 (30779703-30779562)