Non-Coding RNA Search

Ss1.1-Pla1-C0000039_E12.5

Sequence:


               
               GCGGCTCGAGGTTGACTTGATCTTCAGAGGAGACTTTCTCCAACGATGTAGAGACAATAC
AATTCAGGGACAACAGGTGTATTACCCCATCATCTTTAGCCAGTATGACCCAAAGGTAAC
CTACGGGGGAAATCCTCCTCCTGATGATGACTTTGCCTTCTCAAAGAAGACTGGATTTTG
GAGAGACTATGGATATGGAATTACCTGTATTTATAAAAGTGATCTTCTGGGTGCAGGTGG
ATTTGATACCTCAATACAAGGCTGGGGACTGGAAGATGTAGATCTCTACAATAAAGTTAT
TCTATCTGGCTTAAGGCCCTTCAGAAGTCAAGAAGTAGGAGTGGTGCATATTTTCCATCC
GGTTCATTGTGACCCTAACTTGGACCCTAAGCAGTATAAGATGTGCTTAGGATCCAAGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGCTCGAGGTTGACTTGATCTTCAGAGGAGACTTTCTCCAACGATGTAGAGACAATAC
AATTCAGGGACAACAGGTGTATTACCCCATCATCTTTAGCCAGTATGACCCAAAGGTAAC
CTACGGGGGAAATCCTCCTCCTGATGATGACTTTGCCTTCTCAAAGAAGACTGGATTTTG
GAGAGACTATGGATATGGAATTACCTGTATTTATAAAAGTGATCTTCTGGGTGCAGGTGG
ATTTGATACCTCAATACAAGGCTGGGGACTGGAAGATGTAGATCTCTACAATAAAGTTAT
TCTATCTGGCTTAAGGCCCTTCAGAAGTCAAGAAGTAGGAGTGGTGCATATTTTCCATCC
GGTTCATTGTGACCCTAACTTGGACCCTAAGCAGTATAAGATGTGCTTAGGATCCAAGGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               302-420, - strand, RNAz p=0.938375

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               302-420, - strand, RNAz p=0.938375

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               8-420, gnl|bosTau2|chr21 (2824170-2824582)
               

               
               8-420, gnl|Hg17|chr15 (99535634-99535222)
               

               
               8-420, gnl|Mm7|chr7 (62029873-62030285)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               8-420, gnl|bosTau2|chr21 (2824170-2824582)
               

               
               8-420, gnl|Hg17|chr15 (99535634-99535222)
               

               
               8-420, gnl|Mm7|chr7 (62029873-62030285)

	8-420, gnl\|bosTau2\|chr21 (2824170-2824582)
	8-420, gnl\|Hg17\|chr15 (99535634-99535222)
	8-420, gnl\|Mm7\|chr7 (62029873-62030285)