Non-Coding RNA Search

Ss1.1-Pla1-C0000042_D24.5

Sequence:


               
               GGCGGCCGCGGCTCGAGAATAAGTAAAAGATGATCGCAGAAGTATAAATCCTTTTCTGTA
ATAATCCTTCAAATAATCAAAAACAGTAATTTCAAATATTTCTGTTCCAGATCTTTCAGC
CACATAATGTATCACCCAGGCTCTGCCTCATTCTGTTTGCCATCCTGACGCCCTTTTTGT
TCTTAAACTGTAGCGCTCAGAGTCAGAACAATCCATGTACTCCACCCAGTTCGGAAATAG
TGAGACCATCAGCATCTTAATTTGCAGTGACTATTCTAATTAACTCGACTCAAAATTGCA
TTTACTCTTTTGAAAGTGAGGTAGCCTATGCTTTTGCCGTGGATTGTTTGAACTTTTCTA
GGCTGCTTTCCATTGATCAGTATTAAATTTAAATTTAATTATTTTGGTTGACATCTTCTT
GAATAGTGATACTGTCATCTAGTATTACAGTTCTTTGAGATTCTTGTTTTATAGATATTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCGGCCGCGGCTCGAGAATAAGTAAAAGATGATCGCAGAAGTATAAATCCTTTTCTGTA
ATAATCCTTCAAATAATCAAAAACAGTAATTTCAAATATTTCTGTTCCAGATCTTTCAGC
CACATAATGTATCACCCAGGCTCTGCCTCATTCTGTTTGCCATCCTGACGCCCTTTTTGT
TCTTAAACTGTAGCGCTCAGAGTCAGAACAATCCATGTACTCCACCCAGTTCGGAAATAG
TGAGACCATCAGCATCTTAATTTGCAGTGACTATTCTAATTAACTCGACTCAAAATTGCA
TTTACTCTTTTGAAAGTGAGGTAGCCTATGCTTTTGCCGTGGATTGTTTGAACTTTTCTA
GGCTGCTTTCCATTGATCAGTATTAAATTTAAATTTAATTATTTTGGTTGACATCTTCTT
GAATAGTGATACTGTCATCTAGTATTACAGTTCTTTGAGATTCTTGTTTTATAGATATTT

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

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               40-392, gnl|bosTau2|chr5 (53183463-53183807)
               

               
               40-392, gnl|canFam2|chr27 (26237878-26237009)
               

               
               40-392, gnl|hg17|chr12 (24228553-24229424)
               

               
               40-392, gnl|Hg17|chr12 (24228979-24228579)
               

               
               40-392, gnl|panTro1|chrUn_random (50613217-50614088)
               

               
               40-392, gnl|rheMac2|chr11 (24448037-24448907)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               40-392, gnl|bosTau2|chr5 (53183463-53183807)
               

               
               40-392, gnl|canFam2|chr27 (26237878-26237009)
               

               
               40-392, gnl|hg17|chr12 (24228553-24229424)
               

               
               40-392, gnl|Hg17|chr12 (24228979-24228579)
               

               
               40-392, gnl|panTro1|chrUn_random (50613217-50614088)
               

               
               40-392, gnl|rheMac2|chr11 (24448037-24448907)

	40-392, gnl\|bosTau2\|chr5 (53183463-53183807)
	40-392, gnl\|canFam2\|chr27 (26237878-26237009)
	40-392, gnl\|hg17\|chr12 (24228553-24229424)
	40-392, gnl\|Hg17\|chr12 (24228979-24228579)
	40-392, gnl\|panTro1\|chrUn_random (50613217-50614088)
	40-392, gnl\|rheMac2\|chr11 (24448037-24448907)