Ss1.1-Spl1-SPL010005G03.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGTCGCTGCTCGGAGTCCCTCTCTTCGCGGGTTCCCCTCTCTGCCGTTCTCAGTTCTCTG TAGCCCGCGGTTCGCCGCCCCGCTAGCCGCCGCGATGCCGGTGTTTCATACGCGAACGAT CGAGAGCATCCTGGAGCCGGTGGCGCAGCAGATCTCGCACCTGGTGATCATGCACGAGGA AGGCGAGGTGGACGGCAAAGCCATCCCTGACCTCACCGCGCCTGTGGCCGCCGTGCAGGC GGCGGTCAGCAACCTCGTCCGGGTTGGAAAAGAGACTGTTCAAACCACTGAGGATCAGAT TTTGAAGAGAGATATGCCACCAGCATTTATTAAGGTTGAGAATGCTTGTACCAAGCTTGT CCAGGCAGCCCAGATGCTTCAGTCAGACCCTTACTCAGTGCCTGCTCGAGACTATCTGAT CGATGGGTCAAGGGGCATCCTCTCCGGCACATCAGACCTGCTCCTCACCTTCGATGAGGC TGAGGTTCGTAAAATTATTAGAGTTTGCAAAGGAATTTTGGAATATCTTACAGTGGCAGA AGTGGTGGAAACTATGGAAGATTTGGTCACTTACACAAAGAATCTTGGACCAGGAATGAC TAAGATGGCCAAGATGATTGACGAGAGGCAGCAGGAACTGACTCACCAGGAGCACCGAGT GATGTTGGTGAATTCAATGAACACTGTAAAAGAGCTGTTGCCAGTTCTCATTTCCGGTAT TTTCTGTCTGTACTTTTATCTTACAGGGGAAAACAAAACAAAACAAAATGAGACAAAAAC AGAAAAGCCAACGTTAATATGTTCTAAACTCTGGTGTTCATTTTCTTTTGCTGTTTAGTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGTCGCTGCTCGGAGTCCCTCTCTTCGCGGGTTCCCCTCTCTGCCGTTCTCAGTTCTCTG TAGCCCGCGGTTCGCCGCCCCGCTAGCCGCCGCGATGCCGGTGTTTCATACGCGAACGAT CGAGAGCATCCTGGAGCCGGTGGCGCAGCAGATCTCGCACCTGGTGATCATGCACGAGGA AGGCGAGGTGGACGGCAAAGCCATCCCTGACCTCACCGCGCCTGTGGCCGCCGTGCAGGC GGCGGTCAGCAACCTCGTCCGGGTTGGAAAAGAGACTGTTCAAACCACTGAGGATCAGAT TTTGAAGAGAGATATGCCACCAGCATTTATTAAGGTTGAGAATGCTTGTACCAAGCTTGT CCAGGCAGCCCAGATGCTTCAGTCAGACCCTTACTCAGTGCCTGCTCGAGACTATCTGAT CGATGGGTCAAGGGGCATCCTCTCCGGCACATCAGACCTGCTCCTCACCTTCGATGAGGC TGAGGTTCGTAAAATTATTAGAGTTTGCAAAGGAATTTTGGAATATCTTACAGTGGCAGA AGTGGTGGAAACTATGGAAGATTTGGTCACTTACACAAAGAATCTTGGACCAGGAATGAC TAAGATGGCCAAGATGATTGACGAGAGGCAGCAGGAACTGACTCACCAGGAGCACCGAGT GATGTTGGTGAATTCAATGAACACTGTAAAAGAGCTGTTGCCAGTTCTCATTTCCGGTAT TTTCTGTCTGTACTTTTATCTTACAGGGGAAAACAAAACAAAACAAAATGAGACAAAAAC AGAAAAGCCAACGTTAATATGTTCTAAACTCTGGTGTTCATTTTCTTTTGCTGTTTAGTT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 145-264, - strand, RNAz p=0.588655 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 145-264, - strand, RNAz p=0.588655 |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 1-264, gnl|bosTau2|chr28 (23122384-23122646) | |
| 1-264, gnl|Hg17|chr10 (75427880-75428141) | |
| 1-264, gnl|Mm7|chr14 (18585982-18586247) | |
| 334-486, gnl|bosTau2|chr28 (23179037-23179189) | |
| 334-486, gnl|canFam2|chr4 (27683810-27683991) | |
| 334-486, gnl|danRer3|chr11 (9049655-9049820) | |
| 334-486, gnl|dasNov1|scaffold_9299 (39428-39607) | |
| 334-486, gnl|echTel1|scaffold_322040 (26471-26648) | |
| 334-486, gnl|fr1|chrUn (62866972-62866792) | |
| 334-486, gnl|galGal2|chr6 (14681996-14681817) | |
| 334-486, gnl|hg17|chr10 (75500422-75500601) | |
| 334-486, gnl|Hg17|chr10 (75500434-75500586) | |
| 334-486, gnl|mm7|chr14 (18641349-18641530) | |
| 334-486, gnl|Mm7|chr14 (18641361-18641513) | |
| 334-486, gnl|monDom2|scaffold_14 (2080273-2080443) | |
| 334-486, gnl|oryCun1|scaffold_125435 (50624-50443) | |
| 334-486, gnl|panTro1|chr8 (76739893-76740072) | |
| 334-486, gnl|rn3|chr15 (3528176-3527995) | |
| 334-486, gnl|tetNig1|chr2_random (496037-496196) | |
| 334-486, gnl|xenTro1|scaffold_379 (145984-145808) | |
| 590-761, gnl|bosTau2|chr28 (23181694-23181864) | |
| 590-761, gnl|canFam2|chr4 (27686122-27686324) | |
| 590-761, gnl|danRer3|chr11 (9052147-9052338) | |
| 590-761, gnl|dasNov1|scaffold_9299 (41706-41910) | |
| 590-761, gnl|echTel1|scaffold_322040 (28895-29100) | |
| 590-761, gnl|fr1|chrUn (62865509-62865318) | |
| 590-761, gnl|galGal2|chr6 (14678198-14678011) | |
| 590-761, gnl|hg17|chr10 (75502422-75502626) | |
| 590-761, gnl|Hg17|chr10 (75502490-75502655) | |
| 590-761, gnl|mm7|chr14 (18644342-18644546) | |
| 590-761, gnl|Mm7|chr14 (18644410-18644569) | |
| 590-761, gnl|monDom2|scaffold_14 (2083180-2083385) | |
| 590-761, gnl|oryCun1|scaffold_125435 (48264-48061) | |
| 590-761, gnl|panTro1|chr8 (76741893-76742097) | |
| 590-761, gnl|rn3|chr15 (3525461-3525262) | |
| 590-761, gnl|tetNig1|chr2_random (497383-497574) | |
| 590-761, gnl|xenTro1|scaffold_379 (137018-136835) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-264, gnl|bosTau2|chr28 (23122384-23122646) | |
| 1-264, gnl|Hg17|chr10 (75427880-75428141) | |
| 1-264, gnl|Mm7|chr14 (18585982-18586247) | |
| 334-486, gnl|bosTau2|chr28 (23179037-23179189) | |
| 334-486, gnl|canFam2|chr4 (27683810-27683991) | |
| 334-486, gnl|danRer3|chr11 (9049655-9049820) | |
| 334-486, gnl|dasNov1|scaffold_9299 (39428-39607) | |
| 334-486, gnl|echTel1|scaffold_322040 (26471-26648) | |
| 334-486, gnl|fr1|chrUn (62866972-62866792) | |
| 334-486, gnl|galGal2|chr6 (14681996-14681817) | |
| 334-486, gnl|hg17|chr10 (75500422-75500601) | |
| 334-486, gnl|Hg17|chr10 (75500434-75500586) | |
| 334-486, gnl|mm7|chr14 (18641349-18641530) | |
| 334-486, gnl|Mm7|chr14 (18641361-18641513) | |
| 334-486, gnl|monDom2|scaffold_14 (2080273-2080443) | |
| 334-486, gnl|oryCun1|scaffold_125435 (50624-50443) | |
| 334-486, gnl|panTro1|chr8 (76739893-76740072) | |
| 334-486, gnl|rn3|chr15 (3528176-3527995) | |
| 334-486, gnl|tetNig1|chr2_random (496037-496196) | |
| 334-486, gnl|xenTro1|scaffold_379 (145984-145808) | |
| 590-761, gnl|bosTau2|chr28 (23181694-23181864) | |
| 590-761, gnl|canFam2|chr4 (27686122-27686324) | |
| 590-761, gnl|danRer3|chr11 (9052147-9052338) | |
| 590-761, gnl|dasNov1|scaffold_9299 (41706-41910) | |
| 590-761, gnl|echTel1|scaffold_322040 (28895-29100) | |
| 590-761, gnl|fr1|chrUn (62865509-62865318) | |
| 590-761, gnl|galGal2|chr6 (14678198-14678011) | |
| 590-761, gnl|hg17|chr10 (75502422-75502626) | |
| 590-761, gnl|Hg17|chr10 (75502490-75502655) | |
| 590-761, gnl|mm7|chr14 (18644342-18644546) | |
| 590-761, gnl|Mm7|chr14 (18644410-18644569) | |
| 590-761, gnl|monDom2|scaffold_14 (2083180-2083385) | |
| 590-761, gnl|oryCun1|scaffold_125435 (48264-48061) | |
| 590-761, gnl|panTro1|chr8 (76741893-76742097) | |
| 590-761, gnl|rn3|chr15 (3525461-3525262) | |
| 590-761, gnl|tetNig1|chr2_random (497383-497574) | |
| 590-761, gnl|xenTro1|scaffold_379 (137018-136835) |