Non-Coding RNA Search

Ss1.1-Spl1-SPL010006H05.5

Sequence:


               
               ATTTAAAAAGAGCGATAGTTTGCTTTTAAATAACTCATGTTTGTGTGCAAAGTGTTTCTA
AATTGAGACCTTTCAGTTCTTTTGAAATAAACGGATACTTCTAAATTCATTATCGCCAAG
ATATTTGCTTAGAGGCAATGTGTTATTTTAAAAAATTCGTTTAATAAAAAAAAAAAAAAC
AACATATTTCAACCAAGCAGACCCCCTGCAAACCTTTTCACAGAATATTCTAAACCTTTC
ATTTAAAATATGGGGGAATGAATTTTAACCCATTTTACAGGACTGTCAATCCCCTCCAAT
TAATGAAGGAGTAGTATAAAAAAGAGACACTCGACAGAATTGGAGATGAAGAGAGGCTGA
AACAGAACTGATTTTCAGGATATTGGTTTTGATAATAGAAGGATAGCTATGATCTGTAGT
TGATAAATGAGGCTCATTAAGTAAGGGATGATAAATGCAGATGTTCCTGGCTAATAGAAA
AGTCAGCATACAAATTTCGCGGTAGCAAATGGGAGACTGGAAGGTTCTGACCAGCTTTCC
AATGACCTGTGTGAGGCCATGGAGTCTCCCCTGCGGCCTCACAGGCTGGGGTGCTTGCAG
CTCTCGGGTCCGTCTGCAAAGAGGTGCAGAACCATACCTGGACATGAGCCTCTCGCACCA
GAGGGCCCGTCTCTGAGCACTGGGGGTGGGCAGCAGTGCTGCGCTTTCGGTAGAACAACC
CACGGAAAGCAGCGCCTGTGAGGGCTTCTCACCTGGGGGCAGCGGGGCTCCAGCGAGAGA
GCTGTCAGCAGCGTGGCTCCTTGGAGTTGTAATTTGAACTTTTCATGCTAGAATGAAAAA
TGACGTGTTTGGAGGTACCTTTCTTATTCTAACGTGCTGCTGCTGTTTGTACAGGGTTCT
TGGCATGCTGAGCGAGAAGGCCTCCCCTCTCCTTTCCTCCTAGTGCTTCTCCTCTTCCCT
GGTATCGGGAGGGGTGGCGGGCTCTTCCACGTTGTGGCCACTGTGAGACGGTGAATGCCT
TTTACTTCCTGTTAGAAGTTTTAATTTACAGGCTTCCACTTTCTAGGGGACTGAAGGCAC
ACAGGTGTTTTATGTAGCGGGATATATAACCAGCAGGCGCTCATGGTAGCACTTGTGGAC
TGGTTAATTGCTTTTATTTTCCTCTTGAACCAAAAGTAATTGTTTCTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTAAAAAGAGCGATAGTTTGCTTTTAAATAACTCATGTTTGTGTGCAAAGTGTTTCTA
AATTGAGACCTTTCAGTTCTTTTGAAATAAACGGATACTTCTAAATTCATTATCGCCAAG
ATATTTGCTTAGAGGCAATGTGTTATTTTAAAAAATTCGTTTAATAAAAAAAAAAAAAAC
AACATATTTCAACCAAGCAGACCCCCTGCAAACCTTTTCACAGAATATTCTAAACCTTTC
ATTTAAAATATGGGGGAATGAATTTTAACCCATTTTACAGGACTGTCAATCCCCTCCAAT
TAATGAAGGAGTAGTATAAAAAAGAGACACTCGACAGAATTGGAGATGAAGAGAGGCTGA
AACAGAACTGATTTTCAGGATATTGGTTTTGATAATAGAAGGATAGCTATGATCTGTAGT
TGATAAATGAGGCTCATTAAGTAAGGGATGATAAATGCAGATGTTCCTGGCTAATAGAAA
AGTCAGCATACAAATTTCGCGGTAGCAAATGGGAGACTGGAAGGTTCTGACCAGCTTTCC
AATGACCTGTGTGAGGCCATGGAGTCTCCCCTGCGGCCTCACAGGCTGGGGTGCTTGCAG
CTCTCGGGTCCGTCTGCAAAGAGGTGCAGAACCATACCTGGACATGAGCCTCTCGCACCA
GAGGGCCCGTCTCTGAGCACTGGGGGTGGGCAGCAGTGCTGCGCTTTCGGTAGAACAACC
CACGGAAAGCAGCGCCTGTGAGGGCTTCTCACCTGGGGGCAGCGGGGCTCCAGCGAGAGA
GCTGTCAGCAGCGTGGCTCCTTGGAGTTGTAATTTGAACTTTTCATGCTAGAATGAAAAA
TGACGTGTTTGGAGGTACCTTTCTTATTCTAACGTGCTGCTGCTGTTTGTACAGGGTTCT
TGGCATGCTGAGCGAGAAGGCCTCCCCTCTCCTTTCCTCCTAGTGCTTCTCCTCTTCCCT
GGTATCGGGAGGGGTGGCGGGCTCTTCCACGTTGTGGCCACTGTGAGACGGTGAATGCCT
TTTACTTCCTGTTAGAAGTTTTAATTTACAGGCTTCCACTTTCTAGGGGACTGAAGGCAC
ACAGGTGTTTTATGTAGCGGGATATATAACCAGCAGGCGCTCATGGTAGCACTTGTGGAC
TGGTTAATTGCTTTTATTTTCCTCTTGAACCAAAAGTAATTGTTTCTA

Aligned organism(s): 5 entry(ies)

More info

Aligned organism(s): 5 entry(ies)

Help | Less info


               
               1-770, gnl|bosTau2|chr9 (57255316-57254543)
               

               
               1-770, gnl|Hg17|chr6 (157355087-157355742)
               

               
               1-770, gnl|Mm7|chr17 (5075563-5076314)
               


               
               789-1188, gnl|bosTau2|chr9 (57254334-57253903)
               

               
               789-1188, gnl|Hg17|chr6 (157355823-157356269)

Aligned organism(s): 5 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-770, gnl|bosTau2|chr9 (57255316-57254543)
               

               
               1-770, gnl|Hg17|chr6 (157355087-157355742)
               

               
               1-770, gnl|Mm7|chr17 (5075563-5076314)
               


               
               789-1188, gnl|bosTau2|chr9 (57254334-57253903)
               

               
               789-1188, gnl|Hg17|chr6 (157355823-157356269)

	1-770, gnl\|bosTau2\|chr9 (57255316-57254543)
	1-770, gnl\|Hg17\|chr6 (157355087-157355742)
	1-770, gnl\|Mm7\|chr17 (5075563-5076314)

	789-1188, gnl\|bosTau2\|chr9 (57254334-57253903)
	789-1188, gnl\|Hg17\|chr6 (157355823-157356269)