Non-Coding RNA Search

Ss1.1-Spl1-SPL010009A12.5

Sequence:


               
               ATACGCTCCGCCTCGCGTTCGGTGTGAGACGTAGAACTCAGCGACTGAGGCCACGAGCGA
GGTGAGGTGGGGGTGCCGCGGCGCGGGGACTCAAACGCTAAGAGGGCAATGGAGTCGGGC
TACACCCTTATTTCCCCTTACAGATTTCCCCGAACCCTTGGGCCCACTCTTCACCCTAGC
TCCTCCCGCCCCCGCTCTGGTCTCTGGCTGGCGGCTAGGCCCGTACTTCCCTAACCTTCC
AACCCCGCAGATGCCTGTGGCCGTGGGGCCTTACGGACAGTCCCAGCCAAGCTGCTTTGA
CCGCGTGAAGATGGGCTTTGTGATGGGTTGCGCCGTGGGCATGGCGGCAGGGGCGCTCTT
CGGCACCTTTTCCTGTCTCAGGTGAGGGGGGCGGGCGGTGATCTCTGGGCGGGACTACCA
GACTTTCTCGGTCCACACCACTCACCACTCGACCTGCAGCCAGGATAAGAGCCTACTTAC
TCCAATTCCCTCTGGCCTTTAACGAGCCAGATTTTCTAAACACCTTCAGTCTGGGAGGAC
AGGTTGGAAGCCTAAATGGTTGAATATGAGCTCTGACTTTAAAACGCTCTCTGGCCCTTA
CTCATTCTGTAACCTTAGGGAAATTGGAGCTTGCGTTTCATGTGTAAAGTGAGGTCTGTA
ACTGCTACCTCATAGTTTAAAGGATCAAATCAGAGCACACACAGAATGTGGCATATGTCA
TGTGCTCAATAAATTGTATTCCTATTGTGTTAAATATTATATTTATTTCCAATTGCACAT
AGCAAACTTGCTGATTAATTTCAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATACGCTCCGCCTCGCGTTCGGTGTGAGACGTAGAACTCAGCGACTGAGGCCACGAGCGA
GGTGAGGTGGGGGTGCCGCGGCGCGGGGACTCAAACGCTAAGAGGGCAATGGAGTCGGGC
TACACCCTTATTTCCCCTTACAGATTTCCCCGAACCCTTGGGCCCACTCTTCACCCTAGC
TCCTCCCGCCCCCGCTCTGGTCTCTGGCTGGCGGCTAGGCCCGTACTTCCCTAACCTTCC
AACCCCGCAGATGCCTGTGGCCGTGGGGCCTTACGGACAGTCCCAGCCAAGCTGCTTTGA
CCGCGTGAAGATGGGCTTTGTGATGGGTTGCGCCGTGGGCATGGCGGCAGGGGCGCTCTT
CGGCACCTTTTCCTGTCTCAGGTGAGGGGGGCGGGCGGTGATCTCTGGGCGGGACTACCA
GACTTTCTCGGTCCACACCACTCACCACTCGACCTGCAGCCAGGATAAGAGCCTACTTAC
TCCAATTCCCTCTGGCCTTTAACGAGCCAGATTTTCTAAACACCTTCAGTCTGGGAGGAC
AGGTTGGAAGCCTAAATGGTTGAATATGAGCTCTGACTTTAAAACGCTCTCTGGCCCTTA
CTCATTCTGTAACCTTAGGGAAATTGGAGCTTGCGTTTCATGTGTAAAGTGAGGTCTGTA
ACTGCTACCTCATAGTTTAAAGGATCAAATCAGAGCACACACAGAATGTGGCATATGTCA
TGTGCTCAATAAATTGTATTCCTATTGTGTTAAATATTATATTTATTTCCAATTGCACAT
AGCAAACTTGCTGATTAATTTCAC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q5QP16_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q5QP16_HUMAN

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               123-241, - strand, RNAz p=0.826091

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               123-241, - strand, RNAz p=0.826091

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               83-734, gnl|bosTau2|chr13 (46387454-46386803)
               

               
               83-734, gnl|Hg17|chr20 (33750811-33751477)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               83-734, gnl|bosTau2|chr13 (46387454-46386803)
               

               
               83-734, gnl|Hg17|chr20 (33750811-33751477)

	83-734, gnl\|bosTau2\|chr13 (46387454-46386803)
	83-734, gnl\|Hg17\|chr20 (33750811-33751477)