Ss1.1-Spl1-SPL010012B02.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTCTGGGATCGGGCTACAGCAGAAAGGACGTCTGCTCCAACGAGGCTTTTCCAGAGAGT ACCTGGGAGTTGGAAGAGCCAAGGACGCCTCTGTGCTCTGGATTTGGGGTTCTCTGTCCA TGGGCGCAACAGCCACACGCAGCTCGTGAGCAGCCATGGCATTCAGGAACGTGCCCTTTC GCTCCGAGGTTCTGGCCTGGGACGCCGACAGCCTCGCAGACTATTTCAAGAAGCTCAACT ACAAGGACTGTGAAAAGGCTGTGAGGAAGCATCACATCGACGGGCCAAGGTTTTTGAACC TGGCAGAGAATGACATCCAGAAGTTCCCTAAGCTCCGGGTGCCGATTCTAAGTAAGTTAA GTCAAGAAATCAACAAGAATGAAGAGAGAAGGAGCATTTTCACACGCAAACCCCAAGTCC AGCGGTTTCCTGAGGAGACAGAAAGCCATGAAGAAGACAATGGAGGCTGGTCATCCTTTG AAGAAGATGACTATGAGAGTCCCAATGAAGATCAGGATGGGGAGGATGACGGTGACTACG AATCCCCTAACGAGGAGGAGGCGGCGCCCATGGAGGACGATGCTGATTATGAGCCGCCGC CCTCCAATGATGAGGAAGCTCTGCAGAACTCCATCCTGCCTGCCAAGCCTTTCTCCAACT CCAACTCCATGTACATAGACCGGCCGGCCTCCGGGAAGGCACAGCAGCCGCCGGTGCCCC CTCAGAGGCCCATGACCGGCCCCCCTCCTCTGCCTGCTGGCCGCAATC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTCTGGGATCGGGCTACAGCAGAAAGGACGTCTGCTCCAACGAGGCTTTTCCAGAGAGT ACCTGGGAGTTGGAAGAGCCAAGGACGCCTCTGTGCTCTGGATTTGGGGTTCTCTGTCCA TGGGCGCAACAGCCACACGCAGCTCGTGAGCAGCCATGGCATTCAGGAACGTGCCCTTTC GCTCCGAGGTTCTGGCCTGGGACGCCGACAGCCTCGCAGACTATTTCAAGAAGCTCAACT ACAAGGACTGTGAAAAGGCTGTGAGGAAGCATCACATCGACGGGCCAAGGTTTTTGAACC TGGCAGAGAATGACATCCAGAAGTTCCCTAAGCTCCGGGTGCCGATTCTAAGTAAGTTAA GTCAAGAAATCAACAAGAATGAAGAGAGAAGGAGCATTTTCACACGCAAACCCCAAGTCC AGCGGTTTCCTGAGGAGACAGAAAGCCATGAAGAAGACAATGGAGGCTGGTCATCCTTTG AAGAAGATGACTATGAGAGTCCCAATGAAGATCAGGATGGGGAGGATGACGGTGACTACG AATCCCCTAACGAGGAGGAGGCGGCGCCCATGGAGGACGATGCTGATTATGAGCCGCCGC CCTCCAATGATGAGGAAGCTCTGCAGAACTCCATCCTGCCTGCCAAGCCTTTCTCCAACT CCAACTCCATGTACATAGACCGGCCGGCCTCCGGGAAGGCACAGCAGCCGCCGGTGCCCC CTCAGAGGCCCATGACCGGCCCCCCTCCTCTGCCTGCTGGCCGCAATC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 516-635, - strand, RNAz p=0.861432 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 516-635, - strand, RNAz p=0.861432 |
| Aligned organism(s): 27 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
| 1-233, gnl|bosTau2|chr20 (1265257-1265009) | |
| 1-233, gnl|canFam2|chr4 (44811080-44810607) | |
| 1-233, gnl|dasNov1|scaffold_1233 (58964-58492) | |
| 1-233, gnl|echTel1|scaffold_315096 (49117-49592) | |
| 1-233, gnl|hg17|chr5 (169657031-169657507) | |
| 1-233, gnl|Hg17|chr5 (169657364-169657116) | |
| 1-233, gnl|loxAfr1|scaffold_5724 (53172-53648) | |
| 1-233, gnl|mm7|chr11 (33999528-33999051) | |
| 1-233, gnl|Mm7|chr11 (33999192-33999441) | |
| 1-233, gnl|monDom2|scaffold_6 (31153708-31153230) | |
| 1-233, gnl|oryCun1|scaffold_160978 (11679-12151) | |
| 1-233, gnl|panTro1|chr4 (176910435-176910911) | |
| 1-233, gnl|rheMac2|chr6 (166668558-166669034) | |
| 1-233, gnl|rn3|chr10 (19021351-19020874) | |
| 480-678, gnl|bosTau2|chr20 (1243423-1243225) | |
| 480-678, gnl|canFam2|chr4 (44834216-44833969) | |
| 480-678, gnl|dasNov1|scaffold_1233 (81154-80912) | |
| 480-678, gnl|echTel1|scaffold_199736 (506-260) | |
| 480-678, gnl|hg17|chr5 (169630297-169630547) | |
| 480-678, gnl|Hg17|chr5 (169630499-169630301) | |
| 480-678, gnl|loxAfr1|scaffold_5724 (24195-24435) | |
| 480-678, gnl|mm7|chr11 (34023184-34022931) | |
| 480-678, gnl|Mm7|chr11 (34022977-34023178) | |
| 480-678, gnl|monDom2|scaffold_6 (31205136-31204891) | |
| 480-678, gnl|panTro1|chr4 (176883093-176883343) | |
| 480-678, gnl|rheMac2|chr6 (166641249-166641499) | |
| 480-678, gnl|rn3|chr10 (19044703-19044462) |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-233, gnl|bosTau2|chr20 (1265257-1265009) | |
| 1-233, gnl|canFam2|chr4 (44811080-44810607) | |
| 1-233, gnl|dasNov1|scaffold_1233 (58964-58492) | |
| 1-233, gnl|echTel1|scaffold_315096 (49117-49592) | |
| 1-233, gnl|hg17|chr5 (169657031-169657507) | |
| 1-233, gnl|Hg17|chr5 (169657364-169657116) | |
| 1-233, gnl|loxAfr1|scaffold_5724 (53172-53648) | |
| 1-233, gnl|mm7|chr11 (33999528-33999051) | |
| 1-233, gnl|Mm7|chr11 (33999192-33999441) | |
| 1-233, gnl|monDom2|scaffold_6 (31153708-31153230) | |
| 1-233, gnl|oryCun1|scaffold_160978 (11679-12151) | |
| 1-233, gnl|panTro1|chr4 (176910435-176910911) | |
| 1-233, gnl|rheMac2|chr6 (166668558-166669034) | |
| 1-233, gnl|rn3|chr10 (19021351-19020874) | |
| 480-678, gnl|bosTau2|chr20 (1243423-1243225) | |
| 480-678, gnl|canFam2|chr4 (44834216-44833969) | |
| 480-678, gnl|dasNov1|scaffold_1233 (81154-80912) | |
| 480-678, gnl|echTel1|scaffold_199736 (506-260) | |
| 480-678, gnl|hg17|chr5 (169630297-169630547) | |
| 480-678, gnl|Hg17|chr5 (169630499-169630301) | |
| 480-678, gnl|loxAfr1|scaffold_5724 (24195-24435) | |
| 480-678, gnl|mm7|chr11 (34023184-34022931) | |
| 480-678, gnl|Mm7|chr11 (34022977-34023178) | |
| 480-678, gnl|monDom2|scaffold_6 (31205136-31204891) | |
| 480-678, gnl|panTro1|chr4 (176883093-176883343) | |
| 480-678, gnl|rheMac2|chr6 (166641249-166641499) | |
| 480-678, gnl|rn3|chr10 (19044703-19044462) |