Ss1.1-Spl1-SPL010013E07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAGGCGAGTGTCCTTATCCTAGCTACTGGGGCTCGGGCCTGTAAGCCAGTTGGAGTCGCG TCGGCGAGAACTATTGGGCCGAGCGAAGGAAGACGAAGACATGTTGCTCTTCGTGGAGCA GGTAACTTCTAAAGGAACTGGTTTAAATCCTAATGCCAAAGTATGGCAAGAAATACCTCC AGGAAACACTGATACCACTCCAGTTACTCATGGAACTGAAAGCTCTTGGCATGAAACAGC AGCCACATCAGGGTCTCATCCTGAGGGTAATAGAGAGCTTTCAAATGATATGTGTAAGGA GTATGAAATAATGTATTCATCTTGTGAAACTACAAGAAATACTCCAGGCATTGAAGAATC AACCGATGGAATGATTTTAGGACCAGAAGATCTGAACTATCAAATATATGATGTTTCTGG AGAGAGCAACTCAGCAATTTCTACAGAAGACCTGAAAGAATGTCTGAAGAAACAATTAGA ATTCTGTTTCTCACGAGAAAATTTGTCAAAAGATCTTTACCTGATATCTCAAATGGACAG TGATCAGTTCATCCCAATCTGGACAGTTGCCAACATGGAAGAAATAAAAAAACTGACCAC AGACCCTGACCTAATTCTTGAAGTGTTGAGATGTATGTAAATCATGCCTTTAAGCTTACT TTTTAAAGTAAAAAAATTTAAGTATTCTTTTTCTTTCTGATCATACAGGAATTTTTTCTT TCTTCTTCTTTTTCTTTTTTTAATGGCTGCACTCAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAGGCGAGTGTCCTTATCCTAGCTACTGGGGCTCGGGCCTGTAAGCCAGTTGGAGTCGCG TCGGCGAGAACTATTGGGCCGAGCGAAGGAAGACGAAGACATGTTGCTCTTCGTGGAGCA GGTAACTTCTAAAGGAACTGGTTTAAATCCTAATGCCAAAGTATGGCAAGAAATACCTCC AGGAAACACTGATACCACTCCAGTTACTCATGGAACTGAAAGCTCTTGGCATGAAACAGC AGCCACATCAGGGTCTCATCCTGAGGGTAATAGAGAGCTTTCAAATGATATGTGTAAGGA GTATGAAATAATGTATTCATCTTGTGAAACTACAAGAAATACTCCAGGCATTGAAGAATC AACCGATGGAATGATTTTAGGACCAGAAGATCTGAACTATCAAATATATGATGTTTCTGG AGAGAGCAACTCAGCAATTTCTACAGAAGACCTGAAAGAATGTCTGAAGAAACAATTAGA ATTCTGTTTCTCACGAGAAAATTTGTCAAAAGATCTTTACCTGATATCTCAAATGGACAG TGATCAGTTCATCCCAATCTGGACAGTTGCCAACATGGAAGAAATAAAAAAACTGACCAC AGACCCTGACCTAATTCTTGAAGTGTTGAGATGTATGTAAATCATGCCTTTAAGCTTACT TTTTAAAGTAAAAAAATTTAAGTATTCTTTTTCTTTCTGATCATACAGGAATTTTTTCTT TCTTCTTCTTTTTCTTTTTTTAATGGCTGCACTCAT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 153-270, - strand, RNAz p=0.915799 | |
| 495-613, - strand, RNAz p=0.518824 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 153-270, - strand, RNAz p=0.915799 | |
| 495-613, - strand, RNAz p=0.518824 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 117-270, gnl|bosTau2|chr5 (22799946-22799793) | |
| 117-270, gnl|Hg17|chr12 (49107810-49107963) | |
| 117-270, gnl|Mm7|chr15 (99970160-99970304) | |
| 495-733, gnl|bosTau2|chr5 (22789057-22788821) | |
| 495-733, gnl|canFam2|chr27 (7300424-7300256) | |
| 495-733, gnl|danRer3|chr6 (20694078-20694251) | |
| 495-733, gnl|dasNov1|scaffold_11805 (31963-32126) | |
| 495-733, gnl|echTel1|scaffold_102989 (4845-4685) | |
| 495-733, gnl|fr1|chrUn (41709888-41709740) | |
| 495-733, gnl|galGal2|chrUn (6300137-6299975) | |
| 495-733, gnl|hg17|chr12 (49115522-49115684) | |
| 495-733, gnl|Hg17|chr12 (49115537-49115761) | |
| 495-733, gnl|loxAfr1|scaffold_30795 (12487-12648) | |
| 495-733, gnl|mm7|chr15 (99975517-99975682) | |
| 495-733, gnl|Mm7|chr15 (99975537-99975749) | |
| 495-733, gnl|monDom2|scaffold_194 (960016-960178) | |
| 495-733, gnl|oryCun1|scaffold_206379 (45398-45230) | |
| 495-733, gnl|panTro1|chr10 (50331565-50331732) | |
| 495-733, gnl|rheMac2|chr11 (47579910-47580077) | |
| 495-733, gnl|rn3|chr7 (138823486-138823647) | |
| 495-733, gnl|tetNig1|chr9 (3256829-3256971) | |
| 495-733, gnl|xenTro1|scaffold_34 (475498-475666) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 117-270, gnl|bosTau2|chr5 (22799946-22799793) | |
| 117-270, gnl|Hg17|chr12 (49107810-49107963) | |
| 117-270, gnl|Mm7|chr15 (99970160-99970304) | |
| 495-733, gnl|bosTau2|chr5 (22789057-22788821) | |
| 495-733, gnl|canFam2|chr27 (7300424-7300256) | |
| 495-733, gnl|danRer3|chr6 (20694078-20694251) | |
| 495-733, gnl|dasNov1|scaffold_11805 (31963-32126) | |
| 495-733, gnl|echTel1|scaffold_102989 (4845-4685) | |
| 495-733, gnl|fr1|chrUn (41709888-41709740) | |
| 495-733, gnl|galGal2|chrUn (6300137-6299975) | |
| 495-733, gnl|hg17|chr12 (49115522-49115684) | |
| 495-733, gnl|Hg17|chr12 (49115537-49115761) | |
| 495-733, gnl|loxAfr1|scaffold_30795 (12487-12648) | |
| 495-733, gnl|mm7|chr15 (99975517-99975682) | |
| 495-733, gnl|Mm7|chr15 (99975537-99975749) | |
| 495-733, gnl|monDom2|scaffold_194 (960016-960178) | |
| 495-733, gnl|oryCun1|scaffold_206379 (45398-45230) | |
| 495-733, gnl|panTro1|chr10 (50331565-50331732) | |
| 495-733, gnl|rheMac2|chr11 (47579910-47580077) | |
| 495-733, gnl|rn3|chr7 (138823486-138823647) | |
| 495-733, gnl|tetNig1|chr9 (3256829-3256971) | |
| 495-733, gnl|xenTro1|scaffold_34 (475498-475666) |